BGIOSGA031478

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Revision as of 04:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031478| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031478, complete gene.| tag = OsI_345...")
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Gene Name

BGIOSGA031478

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031478, complete gene.

LocusTag

OsI_34509

Ensembl Transcript ID

BGIOSGA031478-TA

Ensembl Protein ID

BGIOSGA031478-PA

Length

3211

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20131209..20134419

Sequence Coding Region

20134101..20134419,20133858..20133965,20133284..20133379,20133039..20133131,20132851..20132939
,20132442..20132720,20132268..20132314,20131996..20132091,20131668..20131773
,20131209..20131358

Genome Context

<gbrowseImage1> name=IndicaChromosome10:20131209..20134419 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:20131209..20134419 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGTTCAGACTTCGTCACCTTGCTTGCTACTCCTACTTGGCTCTCTTGCACTGGTTACACTGACACTGTGTGGCCCAGCTGCTTCTGCACGGCCTGAAACGGGCAGCCTCGATGCATCAGCCACGGCGGCCATGGAGTTGCAGGAGCTCGACCGCGTGATGTCGCTGCCCGGGCAGCCGGCCTACTCGCCGGAATTCAGGCAATACTCCGGCTATGTCACCACTGACGAGTACCTTGGCAAGGCACTCTTCTACTGGTTCTTGGAGGCCACTGACAAGCCTGACGAGAAGCCACTCGTCTTGTGGCTAAATGGAGGACCTGGATGTTCTTCCATTGGGTTTGGACAGGCACAGGAGCTAGGGCCATTTCTGGTGAAGAAAGATGTGGCTGAACTTGAGCTGAATCCATACGCATGGAACCAAGTTGCCAATTTGCTGTTCCTGGACTCTCCTGCTGGTGTTGGGTTTTCTTACACCAACACATCCTTTGGAAAAGATCCACCAGGAGACAATTCCACCGCATATGGTTCATACACTTTCCTGATCAGGTGGTTCCAGAGGTTCCCTCAGCACAAAATGAAGGTGTTCTACATAGCTGGAGAGAGCTATGCAGGACATTACGTTCCCCAGCTTGCTAATGTGATTGTGGATCAGAACAAGATTGCACCTAAAGAAAATTATATAAACTTGAAAGGCATCATGATAGGAAATGCTTACATGGATGGTGACACGGATTTGCTAGGAATTGTTGATTCTGCATGGCATCACGCACTCATCTCAGACAAACTTTACAGTGACTTTCAGAAGTTCTGCAACTTCAGTTTGGTTGATCTGTCTAAAGAGTGCAACGCTGCAATCGATCAGTTCAACGCTCTCTACAGCATCATAGATATCTACAGCCTTTACACCCCTCGATGCGAGCTCGGATACCCAAACTTCAACTCGTCTTTTGCAGCACAAATCGGACGGACCAGCAGCCGTTTTGATTTCCTGAAGATACCAATGGGCTATGATCCATGCTCGCAAACTAATTCTATCAACCGAGCATGGAACGACTCTGACATGACTGTCCTTCCAATCGTCAAGAAACTCACTCAATCAGGGCTCCGGATATGGATTTACAGCGGCGACACGGACGCAAGAATCCCTACAACCTCAACCAGGTACACGCTGAAAAAGCTTGGCCTGCCCATCAAAGAGGACTGGTCGCCATGGTTCCATCACAAGCAGGTTGGTGGGTGGAGTGTGGTGTTCGACGGACTGACATTTGTCACGGTGAGAGGAGCCGGCCACATGGTACCATCCATCATGCCAGAGCAAGCGCTTGAGCTGTTCAAGTACTTCCTGGCCAATCAGAACCTCCCATCCAAGCCATTCTAG</cdnaseq>

Protein Sequence

<aaseq>MKVQTSSPCLLLLLGSLALVTLTLCGPAASARPETGSLDASATAAMELQELDRVMSLPGQPAYSPEFRQYSGYVTTDEYLGKALFYWFLEATDKPDEKPLVLWLNGGPGCSSIGFGQAQELGPFLVKKDVAELELNPYAWNQVANLLFLDSPAGVGFSYTNTSFGKDPPGDNSTAYGSYTFLIRWFQRFPQHKMKVFYIAGESYAGHYVPQLANVIVDQNKIAPKENYINLKGIMIGNAYMDGDTDLLGIVDSAWHHALISDKLYSDFQKFCNFSLVDLSKECNAAIDQFNALYSIIDIYSLYTPRCELGYPNFNSSFAAQIGRTSSRFDFLKIPMGYDPCSQTNSINRAWNDSDMTVLPIVKKLTQSGLRIWIYSGDTDARIPTTSTRYTLKKLGLPIKEDWSPWFHHKQVGGWSVVFDGLTFVTVRGAGHMVPSIMPEQALELFKYFLANQNLPSKPF</aaseq>

Gene Sequence

<dnaseqindica>1..319#455..562#1041..1136#1289..1381#1481..1569#1700..1978#2106..2152#2329..2424#2647..2752#3062..3211#ATGAAGGTTCAGACTTCGTCACCTTGCTTGCTACTCCTACTTGGCTCTCTTGCACTGGTTACACTGACACTGTGTGGCCCAGCTGCTTCTGCACGGCCTGAAACGGGCAGCCTCGATGCATCAGCCACGGCGGCCATGGAGTTGCAGGAGCTCGACCGCGTGATGTCGCTGCCCGGGCAGCCGGCCTACTCGCCGGAATTCAGGCAATACTCCGGCTATGTCACCACTGACGAGTACCTTGGCAAGGCACTCTTCTACTGGTTCTTGGAGGCCACTGACAAGCCTGACGAGAAGCCACTCGTCTTGTGGCTAAATGGAGGTTAATTACCAAGTGCATCTATCTCTAATTAATGACAGCTGGGAATTCTGGTTAATAAAACTAACTGCTGAAATTTGAAGAGAGAATTTTAGCTTAAAAGTGTAACCTTGTGCTGTTTGAAATTGCATTTTTTAGGACCTGGATGTTCTTCCATTGGGTTTGGACAGGCACAGGAGCTAGGGCCATTTCTGGTGAAGAAAGATGTGGCTGAACTTGAGCTGAATCCATACGCATGGAACCAAGGTAATTACAGTAGTTAAACCAGTAGTAACATGTCACAGTCAATCTTTTCTTGATCAAAACACAGTGGTGGAAATGGGGCTAGCTCACTAGCTATATAATAATTTTGAGTAAATTTAACAAAACTACAGATACTTTAACAAAACTACAGATTTAAGATGGAGTATCAATAAATGAAGATTAGTTAGCAAATTTATCACAAAACTATAGGTTTAGTATCAATTTAATCACAAAACTGTAACATTTACAACTCTAGCATAGTAGTGCTAGATATTTAAACTCTAAAATCTGTAGCTTTGTGATAACTTTAATATTAAATATGTAGTTTTGTGATACTTAACTTTAAATTTGTAGTTTTATGATAAACGTGTCGCTAAATCTGTAGATTTGTGATACAACACCTTCTATAGTTTTGTGATAGTTTAGTAAAATTATCTTTAGTTTTGTGAAGTTTACTTGATGATCTTTTTGACTTTTTCAGTTGCCAATTTGCTGTTCCTGGACTCTCCTGCTGGTGTTGGGTTTTCTTACACCAACACATCCTTTGGAAAAGATCCACCAGGAGACAATTCCACCGGTATGTATTTGACAATCACATAACTAGTAATACACAGACCCGAGATATAAACCATTTCTATTATCTTATAAAAACATGAACTGTATAATGGCGTACTCACATTCAGAAAAAGAAGTACTCCATAACAGATGAGTTTTATGAATGATTTGCAGCATATGGTTCATACACTTTCCTGATCAGGTGGTTCCAGAGGTTCCCTCAGCACAAAATGAAGGTGTTCTACATAGCTGGAGAGAGCTATGCAGGTCTACCAAACTTGCTCATTATACTAAATCATGATTAATTTGCTCATGGATGTGTACTAATCTTTGTATGTTTAACTAACATTTCTTGCCACCATGCAGGACATTACGTTCCCCAGCTTGCTAATGTGATTGTGGATCAGAACAAGATTGCACCTAAAGAAAATTATATAAACTTGAAAGGCATCATGGTATTCCCCAATTGCAATATCCCTGCATGGCTGCATCTAGCAATTGGTCTTTTTTTTCAGAAAAAGAAAAAACTAAACTAACAATTGATTTGTTATATTAATTTCATCATTTGCCTTGTGCTTATTCCAGATAGGAAATGCTTACATGGATGGTGACACGGATTTGCTAGGAATTGTTGATTCTGCATGGCATCACGCACTCATCTCAGACAAACTTTACAGTGACTTTCAGAAGTTCTGCAACTTCAGTTTGGTTGATCTGTCTAAAGAGTGCAACGCTGCAATCGATCAGTTCAACGCTCTCTACAGCATCATAGATATCTACAGCCTTTACACCCCTCGATGCGAGCTCGGATACCCAAACTTCAACTCGTCTTTTGCAGCACAAATCGGACGGACCAGCAGCCGTGTAAGCAACCTTGACTTCAGTAATAGCTAAGCAAAAAATTTCTGAGTCATTTTCTCTCTGCATATCATGTGTACGATCGTTGATCAATGTGTGTCTGTATGTTTTTTAATATTTTCATGTGCAAAAGTTTGATTTCCTGAAGATACCAATGGGCTATGATCCATGCTCGCAAACGTACGCGACTGAATATTTCAACCGTAAAGATGTTCAGAAAGCTCTGCATGCCAATATCCCTGGAGCATACTCCCTTTGCCAGTAATCTCTTATCTCTGCTCAAAAATATGCTTTATATTGCGATCAGGGATGCAATTGTGGTGTCTGAACATTGTTCATGTGACAAATTTTGGCAGTAATTCTATCAACCGAGCATGGAACGACTCTGACATGACTGTCCTTCCAATCGTCAAGAAACTCACTCAATCAGGGCTCCGGATATGGATTTACAGGTGAAGTTTCTGTCATCAAGAAATGTTATTCCTGTAATGGCCATGAACATTCTAAGTACTAGGGGAACTCTTAACATTGATCTGCCAAGTCAAACATGTGATTCTGATTACTCTGCTCTTTGTTCATCATGATCGATGTCATCGGTCCATTTCTGAAGAAGTTACTGACATCCATCCAAATTCACCATGATTTTTCTACTGTTGTTTTGGGATGATGAGCAGCGGCGACACGGACGCAAGAATCCCTACAACCTCAACCAGGTACACGCTGAAAAAGCTTGGCCTGCCCATCAAAGAGGACTGGTCGCCATGGTTCCATCACAAGCAGGTACCGTGCATACTAATTCAGAAGCTGAACAAGTTCAGAAAAGTTATGCTGAACTAAACAACATTATCCAATGCTGCACATTACTCCTAAATATATACTAATATTTGCCTGCTTAGCCCGTGTTTAGTTGCAAAATTTTTCTTCAAACTTTCAACTTTTCCATCACATCAAAACTTTCCTACACACATAAATTTTCAACTTTTCCATCACATTATTCCAATTTCAACCAAACTTCCAATTTAGCGTGAACTAAACACACCCTTAGACCAATTGGTCTGGCTGATTTTGATTGTCGTGTGCCGTTTGCAGGTTGGTGGGTGGAGTGTGGTGTTCGACGGACTGACATTTGTCACGGTGAGAGGAGCCGGCCACATGGTACCATCCATCATGCCAGAGCAAGCGCTTGAGCTGTTCAAGTACTTCCTGGCCAATCAGAACCTCCCATCCAAGCCATTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031478

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA031478&oldid=30700"