BGIOSGA031533

From RiceWiki
Revision as of 04:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031533| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031533, complete gene.| tag = OsI_343...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031533

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031533, complete gene.

LocusTag

OsI_34359

Ensembl Transcript ID

BGIOSGA031533-TA

Ensembl Protein ID

BGIOSGA031533-PA

Length

3776

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19152244..19156019

Sequence Coding Region

19155843..19156019,19155654..19155713,19155205..19155276,19154902..19155110,19154654..19154814
,19154502..19154560,19154336..19154382,19154073..19154216,19153432..19153523
,19152244..19152785

Genome Context

<gbrowseImage1> name=IndicaChromosome10:19152244..19156019 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:19152244..19156019 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAACTCTCTGGGGTGCTCCGCCTCCGGGGAGAGGCTGGTGTCGGCGGCGCGGGACGGGGACGCGGTGGAGGCGCGGATGCTGCTGGAGCTCAGCCCGGCGCTGGCGCGGTACTCCACCTTCGGCGGCCTCAACTCCCCGCTCCACTTCGCCGCCGCTAAGGGCCACCTCGACATTGTGACGCTGTTGCTGGAGAAGGGCGCGGATGTGAACGTACGGAACTACTGCGGGCAGACTGCGTTGATGCACGCATGCCGGCATGGCCACTGGGAGGTGGTTCAGATGCTTCTGCTCTTCAGATGCAATGTTACCAGGGCGGATTACTTGAGTGGCCGAACAGCATTGCATTTCGCAGCACATGATGGACTTGTTCGGTGCGTTCGTCTTTTACTCGCGGACTTTGTCCCAAGTGCTCCCTTAGAGGATGGTGCTTCTTCGACGGTGGATGGTGGTGAATGTCAGACGAATAGTGGGAGCAGTCCTTGTTCTTCTTTGGGACTGAAATTTAATGAATCTGCTCGTTTGAGATATATCAACAAACCTGCTGATGGCGGTGTTACAGCACTTCATATGGCAGCTTTGAATGGTCATTTTGATTGCATGCAATTGTTGATTGACTTGGGTGCTAATGTGTCAGCTGTCACATTCCCGTATGGCACTACAGCAAATTTGATAGGAGCTGGCAGTACTCCTTTGCATTATGCAGCTGGTGGAGGAAATGCTGAGTGTTGCCAGCTACTTCTGTCAAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGGGTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCCATTACTTTCTCCAAACTCAAACTCGAGTATCCCTGCATATCAACCATCTAATTATCTTGCCTTGCCACTCATGAGCATACTTAATATAGCTAGAGAATTTGGGTTGCTGCACACCGTAGCCTCTGTGGATGATAGTGATCTTTGTGCAGTTTGCCTTGAAAGGTCTTGTTCAGTAGCTGCTGAAGGTTGTTGTCATGAGTTCTGCATCAAATGTGCTCTTTATCTTTGCTCAACGAGCAATACCCGTGTTGAGTTCACTGGCCCACCTGGATCGATTCCGTGCCCTCTTTGTCGGAATGGAATAATGTCATTTACCAAGTTGCCAAGCACGCCAACAGAAGGGCTTAAATCTAGCTCAGCACTCACGTTCTGTAATCCATGCATGCTAAACACCCGATCTGTAGACTCACCAGCAACTATCAGCAAAGCAGAAATAAGGCGCAACCGTGTTGCAGCTGTCTCTTCAGAGCTAGTCTGCCCACTAACCTGCAGCCCATTTCCATCGTCTGCCCTCCCGACCTGCAGGTGCAGTGACGATGATCCATGTGATGCCATAGAAACACAGGATGGTTCTGAGGTGCAATCTCCTCAGCCATCGCACTGCGCAAGCATGGAGATGGACAAGAGGGAACAGCAGGATCTTGACCGGACTAGCTGCTCAGGCATGTTCTGGAGCCGAAGAAGCTGCCACAGGGAGGAGCAGTGTAATGCAGAGATCAATGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MGNSLGCSASGERLVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLDIVTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHFAAHDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRYINKPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYGTTANLIGAGSTPLHYAAGGGNAECCQLLLSKGASKLTLNCNGWLPIDVARMFGRRFLEPLLSPNSNSSIPAYQPSNYLALPLMSILNIAREFGLLHTVASVDDSDLCAVCLERSCSVAAEGCCHEFCIKCALYLCSTSNTRVEFTGPPGSIPCPLCRNGIMSFTKLPSTPTEGLKSSSALTFCNPCMLNTRSVDSPATISKAEIRRNRVAAVSSELVCPLTCSPFPSSALPTCRCSDDDPCDAIETQDGSEVQSPQPSHCASMEMDKREQQDLDRTSCSGMFWSRRSCHREEQCNAEINA</aaseq>

Gene Sequence

<dnaseqindica>1..177#307..366#744..815#910..1118#1206..1366#1460..1518#1638..1684#1804..1947#2497..2588#3235..3776#ATGGGGAACTCTCTGGGGTGCTCCGCCTCCGGGGAGAGGCTGGTGTCGGCGGCGCGGGACGGGGACGCGGTGGAGGCGCGGATGCTGCTGGAGCTCAGCCCGGCGCTGGCGCGGTACTCCACCTTCGGCGGCCTCAACTCCCCGCTCCACTTCGCCGCCGCTAAGGGCCACCTCGACGTCCGTGACAACCCCCTTCACGCCGTCCTTTGATTTCTTTCGCTGGTGGTTTTTTTTGTTCGATTTGATCGCGAATTGATGTGTGTGTGTGTGTGTTTTTTTTTTTTTTTGGTTTGGTTTTGCATGCAGATTGTGACGCTGTTGCTGGAGAAGGGCGCGGATGTGAACGTACGGAACTACTGCGGGCAGGTAGATCTTTGGGGGATATTATGGGGGTTGATCCTTGTGTTTTAGTGCTATTTCGTGCGTAGGAATCGAATTAATGTGAGATCTATCGTCTAGAAGTAATGGAATTAGAAGTTCTTATGTCGTATCTCAAGTAAAAGGAGTGTGAAGATTCAGTCTTTTGGTTGATTTCTTAGCTCTATAGTTAGCTATGGATTCATAAATTTATTTGTAATCTGTGGACCTGAGCAAGGTTTGAGTCTTTTAGTGCCTTCTGAGGCTCCTGCTTTATGCTTACACACTGGTATAGGTGTTCCATTTCTATTCATCCATTTTATCTTTATCCGAGTTGGAACATTTTGTTGATATTTTTCTTCGTTTATTTGGAATGGTGGATGAAGACTGCGTTGATGCACGCATGCCGGCATGGCCACTGGGAGGTGGTTCAGATGCTTCTGCTCTTCAGATGCAATGTATGGTATTGTAGCGTGGCATTTCTTGTTAGTTCCATATTTTCTGACACATGGAAGGTGCTGACCTCTCTGTGTGTTTGGGTGGCTTGTGAAGGTTACCAGGGCGGATTACTTGAGTGGCCGAACAGCATTGCATTTCGCAGCACATGATGGACTTGTTCGGTGCGTTCGTCTTTTACTCGCGGACTTTGTCCCAAGTGCTCCCTTAGAGGATGGTGCTTCTTCGACGGTGGATGGTGGTGAATGTCAGACGAATAGTGGGAGCAGTCCTTGTTCTTCTTTGGGACTGAAATTTAATGAATCGTATGTATTTTCAAACGAGTATTGGTTTTATCTTGTCTGAAGCAGCTAACAGTTAATGTCTTGCCACATTTCTTATTTTTCTTTTAGTGCTCGTTTGAGATATATCAACAAACCTGCTGATGGCGGTGTTACAGCACTTCATATGGCAGCTTTGAATGGTCATTTTGATTGCATGCAATTGTTGATTGACTTGGGTGCTAATGTGTCAGCTGTCACATTCCCGTATGGCACTACAGCAAATTTGATAGGCAAGTCATAATTCTTGGCTTCAGCTTGCATGCATTAAATAATGATATTTTTGTTATCTCAAACGGAATTATATTTACGTGTTTATGGAACAGGAGCTGGCAGTACTCCTTTGCATTATGCAGCTGGTGGAGGAAATGCTGAGTGTTGCCAGGTCAGTTGCCGCCAAAAAGCAAATCGCTTTTTTTGCGCAAGTACCTTTTTCAGTTGTAACGGTCGGTTGTCGCGTAATGAATTTATTTAATCTGAAAATTGGTGATGCCATTATTGCAGCTACTTCTGTCAAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGGGTAAGAGTTATGTACTACCTATGTTACCGGTCCAAAATATTGATACTATTACTGTTGCAGTTATTATTAGATCCACATGACCATCTTTGTTTCATATTAACATGTACCCTGTTGTTTAGGTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCCATTACTTTCTCCAAACTCAAACTCGAGTATCCCTGCATATCAACCATCTAATTATCTTGCCTTGCCACTCATGAGCATACTTAATATAGCTAGGTTAGTGCTTAACAACTCACTGCTCACTAATCGGTTTTCTTCTGATGGAAGTAAAGTATAAATATAATTCTTGCTTTTGTGGAAAACAATGAGTGCTGGCTTTTGATATGTAAACCTATGTTTATACTTTTTTAGAAAGCACATAAGGTTGTGATGAAAGCAGCCTCATTATACACTAGCAGATCCGGTACTTATCAAAATCTTTCAGGCCAGATTATGTGCTCTGTAGAATTGCAATAATTTCAGAAACTGTTAAGTTAGGAAGGTAACTACAGTTTTGGCTTCAATGATTTTAATCTTCATTGGCTCATGGGTCATGGCACAGTTAACCTTTTGTTACCTTATGAATTATGTTTGGCTTCCAATTACCTGAAACCAAGCATATTTCAATTTAACTTGACAATTCCACCTTGGATAAGAAATGTTTTTTGTTTCTCTTACTATATAACGGTACTAATAATATTATCTTCCTGTTAAAAGATTGATAATGATAAATATATACTTATTGCCTTATTGGAACCTTTATAGATTTTCTCTGTGCATTTGCAGAGAATTTGGGTTGCTGCACACCGTAGCCTCTGTGGATGATAGTGATCTTTGTGCAGTTTGCCTTGAAAGGTCTTGTTCAGTAGCTGCTGAAGGTGGGGTTTACACACTTGCAAATTCATAATTTCAGTCCTTTACTTGCTAACGGATAAATTTCAGTCTGCTGTATTAACTACAAGTAGAAAATGATTATCAGATGTTCATAGTTCTCTCTGCTCTGCTCATAGGTTGAGAACGTTGCTTATGTTCATTTTATTTGTAAATTATAATATGCACTGGCAGGTGATTGTTTGTGTTTCTATCCAAAGTAAAACTTAATGCATGTTAGATGTTGTTAGTATTCTACCTGACAGAACACCTATTCAGGGTAAGGATTTGCCTTAGCAAATTAACGCTGTTGTAAATTGTAATTATACCTTTAGTCTACCATCCAATGAAAGGGATGTTCAATTTTCTAGTTCTGTGCAATTTATCGCTTTCCTTTATCTAGTGAAGGTTCTATGCATATTATGTAACCGTTTTGTGAACCACATTTTTGTTCAGAAAAAAAATGTTAGAAAACAGTGAGAGTAAAGAAAAAACTACCTGTATTATCCTGAAACTTGTCTGCACGGAGTGTTTGGAAGCTTCCATTCCATATATGCTTTTTTTGTATGATTTTTCACTCATTCGTGCATATCACGTAGTGATGCATCACTGAAAAATGTAATGCTGCCCTGACATTATATTCTGTTCTTTCAGGTTGTTGTCATGAGTTCTGCATCAAATGTGCTCTTTATCTTTGCTCAACGAGCAATACCCGTGTTGAGTTCACTGGCCCACCTGGATCGATTCCGTGCCCTCTTTGTCGGAATGGAATAATGTCATTTACCAAGTTGCCAAGCACGCCAACAGAAGGGCTTAAATCTAGCTCAGCACTCACGTTCTGTAATCCATGCATGCTAAACACCCGATCTGTAGACTCACCAGCAACTATCAGCAAAGCAGAAATAAGGCGCAACCGTGTTGCAGCTGTCTCTTCAGAGCTAGTCTGCCCACTAACCTGCAGCCCATTTCCATCGTCTGCCCTCCCGACCTGCAGGTGCAGTGACGATGATCCATGTGATGCCATAGAAACACAGGATGGTTCTGAGGTGCAATCTCCTCAGCCATCGCACTGCGCAAGCATGGAGATGGACAAGAGGGAACAGCAGGATCTTGACCGGACTAGCTGCTCAGGCATGTTCTGGAGCCGAAGAAGCTGCCACAGGGAGGAGCAGTGTAATGCAGAGATCAATGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031533