BGIOSGA031584

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Revision as of 04:41, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031584| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031584, complete gene.| tag = OsI_342...")
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Gene Name

BGIOSGA031584

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031584, complete gene.

LocusTag

OsI_34256

Ensembl Transcript ID

BGIOSGA031584-TA

Ensembl Protein ID

BGIOSGA031584-PA

Length

4038

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18384105..18388142

Sequence Coding Region

18387844..18388142,18384699..18386271,18384105..18384581

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18384105..18388142 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18384105..18388142 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTGCTCGATCCGCATCTGCGTCTGGAAATCACCCGGCGGCAGCAACGAGCAGGAGACGACGACGACGAGAGCCAGCTCCTCGCGGCGAGCTCCTGGTTGCTGCGGCGAGGAGAGGCCTGAGGAGAAGATCAACTGGCTTCTGGTCCTGGAGATGTTCTTCACCAACGCTGCAAGCAGCGTTGGGACTGTTGGATTCGTGTGGGCGACGGTCGTCCTGCTCGGCGGGTTCGTGACGAAGCTCAACCCGGTGGACTTTTGGTTCATCACGACCCTGAGCTTCTTCCAGGCTATTAGGATAATCGGTGGTGACTGGAATGCGGAAAAAACGATAATCTCCGACCTACTGATAGACAATGATTCTTTCAAGAAGTGCAGAAATGAGGATAGCAAAAGATCCAAAGCCTGGTCCTTCTTGCAGACATCCAAGGACAAGTTAACCAATGCTATTGCTTATTGTGCACCCGAAGGTTTGGATTACAACACCCTGCTAACCCTTGGCAGATATCTCTGTAAGACCTCGGCATTCATAGTTCGTCTGTTGAGGTACATAGTGCCCGTGGTTTGGGCCGCACTATCCTTTCCTCACCTGCTCCTCCAAAACTTTGGCGACATAGGGCGAAGTGCTGAAGACATCAACATGAAAGCAGCACTTAATCTGTACTACGGTCTATCAGTCGGGCAAGCCCTGCTGTCCATCATTGCCATCAACCACTCCTACTCTAGCTCAAAGCTTCTGAAAGATGTAGCTAAACAATATGAGCTAAATGTCAATGGGGAAAGGGCAATGGATCTGTACTACCGCCATGTCAGGAGGATCTGCAGAGATGAAGGTATGGCCAAGACCTTGAACATGACTCTGATCGGATTTGCAGTGAAGTCGCTCGCCTCCAATCACGACAAGGAAGCCCAGAAGGCAGGGCTCACTATCTTGCATGACTTGGTGGAAATGGAATACAGTAGGTACAGTACAGAGGCACTCCAGTCAGTAAGAGATTGCCCAGATGCAATTGAGTCCTTGTCCAATGTGGTTGTCTCGACCTTCGAGGATGACAAGCCAACAAGGGTGATGGCTGCCTGGGTCATGGCAAAGCTTGCCGCTCATCTCCATGTTCACGGGATCCTGCCCGTGATGCGATCAGTTTGGTCACTGCTCGAAGCCAGGGATGGAGAGATGGTGACCTCGAATGACAAAGGCATGAAGTTTACGGAGAGAGGGTTGGAGATTCTTGAGCAGCTCTCGTCTCGTGCCTGCAACCTATCTGCTATATCCAGCTCGCACGAGCTCATGGCCAAGCTCACAGCATTCACTTGTGTTCCAGCATTGTCATCGAGAGATGATTTCAGCATTAGGAAGGCCAGATGTGCACTGACGGTCTTCAGCAGGTTTGCATCTTGCACTGGCATACAAGGGATCAACATACGGCAAGACATCCTGGAGAATACCTTGCTTCTCGCTAACATTGGGGAGATTATAATGCAAGGCTCTACCACCAGTGATCTCCTCCAACTCCAAGAGGGGGCGATAGGAATAGTCGATGGCTTTGCGCTGGATGCTGGATCAAGAGACCATAGAGCCACAAGAAAGCTGGTCGTGATGCTGCTGGGTGTTTTCCGTAGCCTGGATGAAGGAGACAAGGTCCAAGTCCAACTATCTGCTGGAAAAGCACTGGCAAGACTGACCACGGATAGCCAGGCCAACTGTCATGCAATCATCAGGGAGAAAGATGTTCTGAAGGACTTCAAGAGGATGCTTTCTGGTCAGCACGGTGCATCTTGCAGAGTTGTGGTGGCAAACATTCTGAGAAACCTATGCGCATACGCCAAACCAGACTCCATGAAGGAATTCTCTGCAGAGAACATCTCGATGGCAATTACAACAATGTGTCAGACAAAGAATGTTAAAGGCGAGGACATGGAGGCCCTTCTCGGCCTTGTTTTGCAGTTCAGTAAACTTCTCCCTGCAGATGATTTCAGTATGGCGGTCAATGGAAATGGGATTGGCTTAAGAAATTTTGTAGAAAAGCTCAAATCAATTCTAGAAGAGGCAAATTCAGAAATAACTAGCACTAGCACTAGCACACACCCTGGAATCAGAAGATTTGCAATTGAGCAGGTCATATGGATGGCGCAATCAGAGCCTCAGCTTCACTGCATCAACCATTTCATCGACTTCGAAATGCGGGATTATCTGGTGGAAGTGCAGCAGACAGCCAGAAGGACATGGCAAGAGAATTTCAAGCTTTCCTCTGGAGACCTCCCTGTCCTGGAGTATGAAGAGTCCCTTCATTCTGTTGCCTTGAGGGCACTGGACCTGATCCCAGGGGAGCAGATTAATGGGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDCSIRICVWKSPGGSNEQETTTTRASSSRRAPGCCGEERPEEKINWLLVLEMFFTNAASSVGTVGFVWATVVLLGGFVTKLNPVDFWFITTLSFFQAIRIIGGDWNAEKTIISDLLIDNDSFKKCRNEDSKRSKAWSFLQTSKDKLTNAIAYCAPEGLDYNTLLTLGRYLCKTSAFIVRLLRYIVPVVWAALSFPHLLLQNFGDIGRSAEDINMKAALNLYYGLSVGQALLSIIAINHSYSSSKLLKDVAKQYELNVNGERAMDLYYRHVRRICRDEGMAKTLNMTLIGFAVKSLASNHDKEAQKAGLTILHDLVEMEYSRYSTEALQSVRDCPDAIESLSNVVVSTFEDDKPTRVMAAWVMAKLAAHLHVHGILPVMRSVWSLLEARDGEMVTSNDKGMKFTERGLEILEQLSSRACNLSAISSSHELMAKLTAFTCVPALSSRDDFSIRKARCALTVFSRFASCTGIQGINIRQDILENTLLLANIGEIIMQGSTTSDLLQLQEGAIGIVDGFALDAGSRDHRATRKLVVMLLGVFRSLDEGDKVQVQLSAGKALARLTTDSQANCHAIIREKDVLKDFKRMLSGQHGASCRVVVANILRNLCAYAKPDSMKEFSAENISMAITTMCQTKNVKGEDMEALLGLVLQFSKLLPADDFSMAVNGNGIGLRNFVEKLKSILEEANSEITSTSTSTHPGIRRFAIEQVIWMAQSEPQLHCINHFIDFEMRDYLVEVQQTARRTWQENFKLSSGDLPVLEYEESLHSVALRALDLIPGEQINGQ</aaseq>

Gene Sequence

<dnaseqindica>1..299#1872..3444#3562..4038#ATGGATTGCTCGATCCGCATCTGCGTCTGGAAATCACCCGGCGGCAGCAACGAGCAGGAGACGACGACGACGAGAGCCAGCTCCTCGCGGCGAGCTCCTGGTTGCTGCGGCGAGGAGAGGCCTGAGGAGAAGATCAACTGGCTTCTGGTCCTGGAGATGTTCTTCACCAACGCTGCAAGCAGCGTTGGGACTGTTGGATTCGTGTGGGCGACGGTCGTCCTGCTCGGCGGGTTCGTGACGAAGCTCAACCCGGTGGACTTTTGGTTCATCACGACCCTGAGCTTCTTCCAGGCTATTAGGTTAGTCATTCCATTGATTCATCTACAATTAATGTATGTATGTAGTATGTATGTATTAGTATATATAATGGGGGTGGTGCAACTGGGAGTGATGCTGCTAAAGAAGGTGGCCGCTGATATCTACAATGCGAGTCACGGATGGAATCCTTGTATCAGGAGGCTGGAGAATGGCGTTTAGAAGGGATACATGGCAGAAGATGGATGCTCTGTTTTTTTTGTTCAGTTTGTTTAGTTTGGCAAACTCTGGGAGTGGATTCTAATCCCACGAGTGGATATCTTCTCGTATACCTTTTTTTTTTTCCAAATTCGATACAAATAGTTATGAAAATTTATGAAAAAATTGACAATGTTGAGTATTGTGATATTTTTCTATCCACCAAATATGCTATTATTCTTTTTTTTAAGATAATGGGATGAAACATTCCGGCCTTTGCTCATCAGAGCTACAGCTAATTATTACAAAGTATCACTTAAACCAAACGAAGAGTGTAGTTAAAATAGAAGACCAAACCGAGATAAGGAGTACACATTTATTCAAGTCTATTTGTGAATCTTCATCCATAGTTTGCAAAAAGTTGCATAACTGTCGTCTCAAGCTTACGACATGCAACCTTCATAAGCTCTTCATTATCTTCACACTTTTGCAGTTGTGCCCAACACCGGAGCCAATATGTTGCCCTAAAAATTACCTACAAATATGAGATAGATGGTGATATGCTATTATTCATACGTTGAATTTGTTTTTTTATATCTCAACGTGTGAGTTGAGTTTGAACCGAAAATTTTATGGAGTTATATAGATATGTTGTATCAGTATTGTCAAATTCCTTTTAAGAATTTTTCATAACCGTTTGAATAGTTTTTAAACGAAAAAGGGGATATCTCCTCGAGGATCAAACTAGTTTCCACAAACCCCTGCTAAAAAAAGAAAATGCTATAGCCCGAAAGTCCTGTCAAAAGCCAAACATTAGACGTTGTGAGTTGTGACGCATAAATATCTAGAAAGAAGTTTAACTCAAAGTTATAACAAATCAACTGATATTTAACTGTATTTTACAATTTGTTTTAAAAAATTATTATGAAAATTTGAAGCTTCAATAGTTGGAACTCGAAGTTTTAGGATTTGACATGATTTCACTTGTTTATTCATTTTTTGTGTTGCACTCCACTTCTTCCCAAGATGTTTCATCCCTGCATTTCTGATGTTACATTGTTCCACGCTTTCTCTTTCTTATTTGGCATGTGAGCTGAACCGAGCCAAGTCGAGCCCAAGCCATATTTTTTTTCAAATAATATTTTCTGGAGCTTTCATTCAGTTGGATTTGCTTCAGTTTTGTTTTTTATTTTTTCTGGAGCTTTCATTCCGTTGGCAATTGGCATTAGTTGGAACCCATTTAAACCAAACGCCCATGTCCAGGATGTCCTCTAGAGCCTACAGGAACTCAAATTTGACCCGACTGCAAGAATATTTTTTTTTTGAGAATTACACAGTACAACGCAGACACTCACAACGCACGCGCACTCACCCCTATGAACACACGCACGCAAATGTAACTTGAAATGTTTTGCTAGGATAATCGGTGGTGACTGGAATGCGGAAAAAACGATAATCTCCGACCTACTGATAGACAATGATTCTTTCAAGAAGTGCAGAAATGAGGATAGCAAAAGATCCAAAGCCTGGTCCTTCTTGCAGACATCCAAGGACAAGTTAACCAATGCTATTGCTTATTGTGCACCCGAAGGTTTGGATTACAACACCCTGCTAACCCTTGGCAGATATCTCTGTAAGACCTCGGCATTCATAGTTCGTCTGTTGAGGTACATAGTGCCCGTGGTTTGGGCCGCACTATCCTTTCCTCACCTGCTCCTCCAAAACTTTGGCGACATAGGGCGAAGTGCTGAAGACATCAACATGAAAGCAGCACTTAATCTGTACTACGGTCTATCAGTCGGGCAAGCCCTGCTGTCCATCATTGCCATCAACCACTCCTACTCTAGCTCAAAGCTTCTGAAAGATGTAGCTAAACAATATGAGCTAAATGTCAATGGGGAAAGGGCAATGGATCTGTACTACCGCCATGTCAGGAGGATCTGCAGAGATGAAGGTATGGCCAAGACCTTGAACATGACTCTGATCGGATTTGCAGTGAAGTCGCTCGCCTCCAATCACGACAAGGAAGCCCAGAAGGCAGGGCTCACTATCTTGCATGACTTGGTGGAAATGGAATACAGTAGGTACAGTACAGAGGCACTCCAGTCAGTAAGAGATTGCCCAGATGCAATTGAGTCCTTGTCCAATGTGGTTGTCTCGACCTTCGAGGATGACAAGCCAACAAGGGTGATGGCTGCCTGGGTCATGGCAAAGCTTGCCGCTCATCTCCATGTTCACGGGATCCTGCCCGTGATGCGATCAGTTTGGTCACTGCTCGAAGCCAGGGATGGAGAGATGGTGACCTCGAATGACAAAGGCATGAAGTTTACGGAGAGAGGGTTGGAGATTCTTGAGCAGCTCTCGTCTCGTGCCTGCAACCTATCTGCTATATCCAGCTCGCACGAGCTCATGGCCAAGCTCACAGCATTCACTTGTGTTCCAGCATTGTCATCGAGAGATGATTTCAGCATTAGGAAGGCCAGATGTGCACTGACGGTCTTCAGCAGGTTTGCATCTTGCACTGGCATACAAGGGATCAACATACGGCAAGACATCCTGGAGAATACCTTGCTTCTCGCTAACATTGGGGAGATTATAATGCAAGGCTCTACCACCAGTGATCTCCTCCAACTCCAAGAGGGGGCGATAGGAATAGTCGATGGCTTTGCGCTGGATGCTGGATCAAGAGACCATAGAGCCACAAGAAAGCTGGTCGTGATGCTGCTGGGTGTTTTCCGTAGCCTGGATGAAGGAGACAAGGTCCAAGTCCAACTATCTGCTGGAAAAGCACTGGCAAGACTGACCACGGATAGCCAGGCCAACTGTCATGCAATCATCAGGGAGAAAGATGTTCTGAAGGACTTCAAGAGGATGCTTTCTGGTCAGCACGGTGCATCTTGCAGAGTTGTGGTGGCAAACATTCTGAGAAACCTATGCGCATACGCCAAACCAGACTCCATGAAGGAATTCTCTGCAGAGAACATCTCGATGGTAAGTACAGAAGAAAACAGTTTTGTGCTTAATAATTCAGCTAAACAGATTCAAATTTGATAATATCGTTGTTTTGATGTGTACTGGGCACTAATGTTTATGCTGGTTAATTTGTAGGCAATTACAACAATGTGTCAGACAAAGAATGTTAAAGGCGAGGACATGGAGGCCCTTCTCGGCCTTGTTTTGCAGTTCAGTAAACTTCTCCCTGCAGATGATTTCAGTATGGCGGTCAATGGAAATGGGATTGGCTTAAGAAATTTTGTAGAAAAGCTCAAATCAATTCTAGAAGAGGCAAATTCAGAAATAACTAGCACTAGCACTAGCACACACCCTGGAATCAGAAGATTTGCAATTGAGCAGGTCATATGGATGGCGCAATCAGAGCCTCAGCTTCACTGCATCAACCATTTCATCGACTTCGAAATGCGGGATTATCTGGTGGAAGTGCAGCAGACAGCCAGAAGGACATGGCAAGAGAATTTCAAGCTTTCCTCTGGAGACCTCCCTGTCCTGGAGTATGAAGAGTCCCTTCATTCTGTTGCCTTGAGGGCACTGGACCTGATCCCAGGGGAGCAGATTAATGGGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031584