BGIOSGA031604

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Revision as of 04:41, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031604| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031604, complete gene.| tag = P0007F0...")
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Gene Name

BGIOSGA031604

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031604, complete gene.

LocusTag

P0007F06.35-1

Ensembl Transcript ID

BGIOSGA031604-TA

Ensembl Protein ID

BGIOSGA031604-PA

Length

2522

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18133386..18135907

Sequence Coding Region

18135548..18135907,18135300..18135358,18135114..18135213,18134921..18135019,18134678..18134764
,18134432..18134523,18134135..18134227,18133624..18133692,18133386..18133521

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18133386..18135907 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18133386..18135907 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCTGCCCGCCCTCGCCGCCGGCCGCGCCGCCTCCGTGCGGCCGCCGCGCGCCTCGGCGGCCTCGGGGGAGGCGGCTGCTGCTGCGGCGGCGGATCAGCCGGCGGGGCGGAGGCCGGTGAAGGTGATACTGCCGAAGAAGAAGCCGCAGAAGTGGTCGACGGGGATGGCGCCCGGGGAGTACGGCGGCGGGCCGGCGACGCCCAAGCCGCGCAAGTACTGGATGGGGAAGGAGGACCGCGACCCCGTGGGCAACACCGACGACTTCATCTGGAACAAGGACTTCCTCCCACACATGGAGCGCGTCATCGCCAACGGCGGCGCAGACACGCCCCCCACCATCACCCGCCTCACCCCGGTGGATGAGGACACGGAATCAGGGTTCCTAAGCATCAACCGCGCAATGAGCCTCGACAGTGTGGATGTTGATCTGAGCAAGGAGCTTCAGGCGCCAACCAGGCCAATCTTGAAAACCCAGGTTGAGGCTGCCTGGAGGGGGCGGGCCATTGGAGCTGAGGCTGTCAACGGTGTTGCGTCTCCTAGATGGAGGCTAGTTCCGACTCGCCGGGAACAAGCAAAGTGGGACCGAGCAGCTAAGGCAGCAACTGGTGGCAGTGATGTCATACTAAGGGAATCAAAGTCAAGAGTGCAGCAAGGAGACCCTGAGGTATTGGCAGCTAAATCAAGGGAGCAATATCTAGAGTTGAAACAAAGATTGCAGTTGTTTACTTTAGGCATTGGTGGCATTGGTTTGGTCTCCGCCTATTTTTCCTACTCTCCTGAGATTGCTGCAAGCTTTGGTGCAGGGCTGATTGGATCTGTCCTGTATCTCCGCATGCTTGGGACCAGTGTGGATTCCTTAGCTGGTGGAACTGGAGAAACTGTGAAGAGTGCTGCTGCCCAACCAAGACTGCTTATTCCAGTGGCACTTGTGATGATGTATAACCGATGGAATGAGATTTTAGTTCCAGATTATGGCTTCATGCACCTGGAATTGATACCCATGCTTGTTGGGTTTTTCACCTACAAGATTGCAACATTTGCTCAGGCAATTCAAGAATCTATACCTGCAGTTGGGAATCGTGAATCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSLPALAAGRAASVRPPRASAASGEAAAAAAADQPAGRRPVKVILPKKKPQKWSTGMAPGEYGGGPATPKPRKYWMGKEDRDPVGNTDDFIWNKDFLPHMERVIANGGADTPPTITRLTPVDEDTESGFLSINRAMSLDSVDVDLSKELQAPTRPILKTQVEAAWRGRAIGAEAVNGVASPRWRLVPTRREQAKWDRAAKAATGGSDVILRESKSRVQQGDPEVLAAKSREQYLELKQRLQLFTLGIGGIGLVSAYFSYSPEIAASFGAGLIGSVLYLRMLGTSVDSLAGGTGETVKSAAAQPRLLIPVALVMMYNRWNEILVPDYGFMHLELIPMLVGFFTYKIATFAQAIQESIPAVGNRES</aaseq>

Gene Sequence

<dnaseqindica>1..360#550..608#695..794#889..987#1144..1230#1385..1476#1681..1773#2216..2284#2387..2522#ATGTCGCTGCCCGCCCTCGCCGCCGGCCGCGCCGCCTCCGTGCGGCCGCCGCGCGCCTCGGCGGCCTCGGGGGAGGCGGCTGCTGCTGCGGCGGCGGATCAGCCGGCGGGGCGGAGGCCGGTGAAGGTGATACTGCCGAAGAAGAAGCCGCAGAAGTGGTCGACGGGGATGGCGCCCGGGGAGTACGGCGGCGGGCCGGCGACGCCCAAGCCGCGCAAGTACTGGATGGGGAAGGAGGACCGCGACCCCGTGGGCAACACCGACGACTTCATCTGGAACAAGGACTTCCTCCCACACATGGAGCGCGTCATCGCCAACGGCGGCGCAGACACGCCCCCCACCATCACCCGCCTCACCCCGGTACGACGAAGCCCCAGACCTCACTCATCTCTAATCGCGCGCGTATGATTGTGCCTATCTGCTCCGATCTAGTGACTGAACTAGTAGCATCCGTGGCATCGTTTGTTTCGAAATTCCAAATCGAGCGTAGAATTTTGCCTGCACTGGATGCTGGTCTATTGTTTCTAAAGTAGCAAATCGTTTGAGCAGGTGGATGAGGACACGGAATCAGGGTTCCTAAGCATCAACCGCGCAATGAGCCTCGACAGGTTACTCTTTCACCTCACCCTCCTATCGAATTCTCTGCTCACATTTGGTGTTGCGACTGTTTAGTGACCTGTGGTTTCTATTGCAGTGTGGATGTTGATCTGAGCAAGGAGCTTCAGGCGCCAACCAGGCCAATCTTGAAAACCCAGGTTGAGGCTGCCTGGAGGGGGCGGGCCATTGGAGCTGAGGTGACAGCCTGTGATCTCATTGTTCAAATATCTTCCCTTTGTTATGGTGTACCAGAGATGGTGCTAAGCTATGGTTTGTGGATTTCGTACGTAGGCTGTCAACGGTGTTGCGTCTCCTAGATGGAGGCTAGTTCCGACTCGCCGGGAACAAGCAAAGTGGGACCGAGCAGCTAAGGCAGCAACTGGTGGCAGTGTAAGTCACTGTAATCTTGTCACTGATTTATTGGTAAATGTAGGTGTTTTTTGAGATATACTACATGTGATAGTCTTTTAACTGTTTCTCTCTTTTTTTAGCATGCATATAATGGTACTTCATAGTTTTGGTCTATGTTCTTTTGTCCCCCTTTAGGATGTCATACTAAGGGAATCAAAGTCAAGAGTGCAGCAAGGAGACCCTGAGGTATTGGCAGCTAAATCAAGGGAGCAATATCTAGAGGTATATCACTCTTCTTTCTAGTTGTTTGTTTGGGTATCGTTCTTTCAGACACTTGAGGAACTCCATTGTCCAAAATCAGTGACATGTACCTTGAGAATCAAATATATGTAGCTTATCTATTGGTCTTTACTAAGCAGTGTGGGATGTTTTGCAGTTGAAACAAAGATTGCAGTTGTTTACTTTAGGCATTGGTGGCATTGGTTTGGTCTCCGCCTATTTTTCCTACTCTCCTGAGATTGCTGCAAGGTATACCTTGGATTGATTTTTTCTTGATGAATAACATTGACTCTGTGTTTATTTAGTGATTTTTCTGACAAATGATTATATATTTGTATATTTGAAACGGTAGGCAATGATTTTTATTTTTTACTATATAGACAAACTTGACAGTACTTTTGGTTTCCACCTTTTAGGACTTGTTTGCTTATGTTGATATTGGTTGCTCTTCAGCTTTGGTGCAGGGCTGATTGGATCTGTCCTGTATCTCCGCATGCTTGGGACCAGTGTGGATTCCTTAGCTGGTGGAACTGGAGAAACTGTGAAGTATGTTTCATTATGTTGTTTTTCAATTGGTATTTGTGGTCTTGTGGATAAACACTTGAGTGGTATTTGAGAAAAGAAAAAGATAAAACACTTGAGTAGACTTCTTCTCTCATAATTGGTTTAGTTTGGCTCAGCTACTAAGGCTTTGTGATCTCATTTTAATATTTTATAGCACTGCAGTTTATTAATTCAAGGTCTTGTAGAACTCGTTTAGTTTGGTATATCTCGCTTAGGGGTTTATCTTGAAAGAAATCTAAAATGATAAAACTTCATCATCTGAACATTCCCCTCCCATGTATTATACAATGCCCTTCAATTATGTTGGTCACCTCTATCTTTTCTTTAAAAATTTTACAACGGAATGTGACCGATGTTCAGCAAATGCTAGGCAACTTTTAAAATATGCTCACATGCATCTTATTTTATTCTTGCATGCTTACAGGAGTGCTGCTGCCCAACCAAGACTGCTTATTCCAGTGGCACTTGTGATGATGTATAACCGATGGAATGAGTAAGTAGATGAAATTTTATTAAACTTTTGATGTTTGAATATTCAAATAGTAGAACGTATGGTTTTCTTACATGTATACCTGTGCTTGCTGGTCTGATGCAGGATTTTAGTTCCAGATTATGGCTTCATGCACCTGGAATTGATACCCATGCTTGTTGGGTTTTTCACCTACAAGATTGCAACATTTGCTCAGGCAATTCAAGAATCTATACCTGCAGTTGGGAATCGTGAATCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031604