BGIOSGA031606

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Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031606| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031606, complete gene.| tag = OsJ_320...")
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Gene Name

BGIOSGA031606

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031606, complete gene.

LocusTag

OsJ_32069

Ensembl Transcript ID

BGIOSGA031606-TA

Ensembl Protein ID

BGIOSGA031606-PA

Length

2703

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18117241..18119943

Sequence Coding Region

18119709..18119943,18118509..18118750,18117241..18118374

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18117241..18119943 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18117241..18119943 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCACGACGTCAGCGACGGCCGCCGGGGGCGCGTTCGCCGCCGCGAAGACGCGGGCGGGGTCGTCGGCGGCGGGCGGCGGCGCGTGCGCGAGGGTCGCCGCCGGCGGACGGAGGCGGTCCGGCGTGGTGGTGCGGTGCGACGCCGGCGTGGAGGCGCAGGCCCAGGCGCAGGCGGTGGCCAAGGCCGCCAGCGTCGCCGCGCTCGAGCAGTTCAAGATCTCCGCCGACCGGTACATGAAGGAAAGAAGTAGCATAGCGGTAATAGGCCTCAGTGTACACACTGCACCAGTGGAGATGCGTGAGAAACTTGCTGTTGCAGAGGAACTATGGCCCCGTGCTATCTCAGAACTCACCAGTCTGAATCATATTGAAGAGGCTGCTGTTCTTAGTACCTGCAATAGAATGGAAATCTATGTGGTAGCTTTATCGTGGAACCGTGGGATTAGAGAAGTGGTAGACTGGATGTCAAAGAAAAGTGGAATCCCTGCTTCTGAGCTCAGGGAGCATCTATTCATGTTGCGTGACAGTGATGCCACACGCCATCTGTTTGAGGTATCTGCTGGGCTTGACTCTTTGGTTCTTGGAGAAGGGCAAATCCTTGCTCAAGTTAAACAAGTTGTCAGAAGTGGGCAAAACAGTGGAGGCTTGGGAAAGAACATCGATAGGATGTTCAAGGATGCAATCACTGCTGGAAAGCGTGTCCGCTGCGAGACTAACATATCATCAGGTGCTGTCTCTGTCAGTTCAGCTGCAGTTGAATTGGCCTTGATGAAGCTTCCAAAGTCGGAATGCCTATCTGCTAGGATGCTGTTGATTGGTGCTGGCAAGATGGGAAAGTTGGTGGTTAAACATTTGATTGCCAAGGGATGCAAGAAAGTTGTTGTGGTGAACCGTTCAGTGGAAAGGGTGGATGCCATCCGCGAAGAGATGAAAGACATTGAGATTGTGTACAGGCCTCTTACAGAGATGTATGAAGCCGCTGCCGAAGCTGATGTCGTGTTCACAAGCACGGCATCCGAAACCCCATTGTTCACAAAGGAGCACGCAGAGGCGCTTCCCGCTATTTCTGATGCTATGGGTGGTGTTCGACTCTTTGTCGACATATCCGTCCCCAGAAATGTCAGCGCCTGTGTGTCTGAAGTTGGCCATGCGCGAGTATACAACGTCGATGACTTGAAAGAGGTTGTGGAAGCCAACAAGGAGGACCGGCTTAGGAAAGCAATGGAGGCCCAAACAATCATCACCCAAGAATTGAAACGGTTCGAGGCATGGAGGGACTCGCTGGAGACTGTTCCGACTATCAAGAAGCTGAGGTCCTACGCCGACAGGATCAGGGCTTCGGAGCTTGAGAAGTGCCTCCAGAAGATCGGCGAAGACTCCCTCACCAAGAAGATGAGAAGATCCATCGAGGAGCTCAGCACCGGCATCGTGAACAAGCTTCTCCACGGCCCATTGCAGCACCTGAGATGTGACGGCAGCGACAGCCGCACCCTCGATGAGACGCTGGAGAACATGCACGCCCTCAACAGGATGTTCAGCCTCGACACCGAGAAGGCGATCATTGAGCAGAAGATCAAGGCGAAGGTGGAGAAGTCCCAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MASTTSATAAGGAFAAAKTRAGSSAAGGGACARVAAGGRRRSGVVVRCDAGVEAQAQAQAVAKAASVAALEQFKISADRYMKERSSIAVIGLSVHTAPVEMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSDATRHLFEVSAGLDSLVLGEGQILAQVKQVVRSGQNSGGLGKNIDRMFKDAITAGKRVRCETNISSGAVSVSSAAVELALMKLPKSECLSARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAAEADVVFTSTASETPLFTKEHAEALPAISDAMGGVRLFVDISVPRNVSACVSEVGHARVYNVDDLKEVVEANKEDRLRKAMEAQTIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDSLTKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAKVEKSQN</aaseq>

Gene Sequence

<dnaseqindica>1..235#1194..1435#1570..2703#ATGGCGAGCACGACGTCAGCGACGGCCGCCGGGGGCGCGTTCGCCGCCGCGAAGACGCGGGCGGGGTCGTCGGCGGCGGGCGGCGGCGCGTGCGCGAGGGTCGCCGCCGGCGGACGGAGGCGGTCCGGCGTGGTGGTGCGGTGCGACGCCGGCGTGGAGGCGCAGGCCCAGGCGCAGGCGGTGGCCAAGGCCGCCAGCGTCGCCGCGCTCGAGCAGTTCAAGATCTCCGCCGACCGTGAGTATCCTCCTCGCGTCCCTAGCCCCTCCTTTTCTTCCCGCTTCGAGCTCGCCGGCGTTGATGCGACAGCTGTGAAAATCTTTGCGTTTTTCTTCGTGTTTTGGTGCTTTGATTACTGCTAGTTCATATTTGAGCATGTCAATTAGTCAATAGGTAGGTTGTGTATGGAGAAGAAAAGGAAAAGATTTGGGATGTCGCATTGCTCTTTTCTAGATTTGCTTTGATTTGTATGAACTATTTCTGCAGGTTTTCTGCTAAGCGAATTTTGTTTACTACCTATACGTTTAACCGGCTAAGTAATTTGAGAGAGAAAAGAAGAGGCAATTTGTGAGCTATCTTGGCATTAGAGCGAATTAGCATTGGAGATGACGAACTTACACGCTAACCCAAAGGAATTATTATTTTTTGCTGTTCTCCAGTGAATTGCAGGGAGAAAGCACATGCCAACTTGTTTTTTTGTGGGTTAGTTGTAGACCTGTAGTAGTAATACACGAAATGGCTTTTTTTATTATGGCAAAGAGCTTTTCATAGTAAGTAACCGAATAATAGTAGTTCAACAAACTGGTTACTATTACTGCAAGATGCCAAATTTTCAAATACATAAAGATGAAAAGAACACGTCGTGGTTGTATTTTGTTTTATTATTAGCTATTGGCCAAGTATGTTGCATGGAAAAAGGTTCCACTCTATCTTGTTTTGGTCAATTGTTTGGGAATTTGAGGTTGTAACCCTATGTAATTAGTAATTACTGCAAAAAGTAGGTATTCCAGATTTGCAACCATTACACTCATAATGTAAACACAGGATACACCCAAAAGAAAAAAACGTATCCATGTGCAACTATTGATTGAAAACGTTTTGTGATGCGCCATCGATTTTTAGTTTCATCCTTTTAGTACAATTTTTTACATGTTTACTTCTTGCAGTATTTGACAATTTTTTCTTTCACTATCAGGGTACATGAAGGAAAGAAGTAGCATAGCGGTAATAGGCCTCAGTGTACACACTGCACCAGTGGAGATGCGTGAGAAACTTGCTGTTGCAGAGGAACTATGGCCCCGTGCTATCTCAGAACTCACCAGTCTGAATCATATTGAAGAGGCTGCTGTTCTTAGTACCTGCAATAGAATGGAAATCTATGTGGTAGCTTTATCGTGGAACCGTGGGATTAGAGAAGTGGTAGACTGGATGTCAAAGGTAAGGATTGTTTCATCAATGCTCATTTGTTCTGTCCATAGTCTTCTTTTCTCGTCTTTTCCCTTTTTCTGTGACTGAAGAACGCGGTTTGTCTTAGATGGTTCTAATTCCTCTGCTGCTTTTTTTTTCAACAGAAAAGTGGAATCCCTGCTTCTGAGCTCAGGGAGCATCTATTCATGTTGCGTGACAGTGATGCCACACGCCATCTGTTTGAGGTATCTGCTGGGCTTGACTCTTTGGTTCTTGGAGAAGGGCAAATCCTTGCTCAAGTTAAACAAGTTGTCAGAAGTGGGCAAAACAGTGGAGGCTTGGGAAAGAACATCGATAGGATGTTCAAGGATGCAATCACTGCTGGAAAGCGTGTCCGCTGCGAGACTAACATATCATCAGGTGCTGTCTCTGTCAGTTCAGCTGCAGTTGAATTGGCCTTGATGAAGCTTCCAAAGTCGGAATGCCTATCTGCTAGGATGCTGTTGATTGGTGCTGGCAAGATGGGAAAGTTGGTGGTTAAACATTTGATTGCCAAGGGATGCAAGAAAGTTGTTGTGGTGAACCGTTCAGTGGAAAGGGTGGATGCCATCCGCGAAGAGATGAAAGACATTGAGATTGTGTACAGGCCTCTTACAGAGATGTATGAAGCCGCTGCCGAAGCTGATGTCGTGTTCACAAGCACGGCATCCGAAACCCCATTGTTCACAAAGGAGCACGCAGAGGCGCTTCCCGCTATTTCTGATGCTATGGGTGGTGTTCGACTCTTTGTCGACATATCCGTCCCCAGAAATGTCAGCGCCTGTGTGTCTGAAGTTGGCCATGCGCGAGTATACAACGTCGATGACTTGAAAGAGGTTGTGGAAGCCAACAAGGAGGACCGGCTTAGGAAAGCAATGGAGGCCCAAACAATCATCACCCAAGAATTGAAACGGTTCGAGGCATGGAGGGACTCGCTGGAGACTGTTCCGACTATCAAGAAGCTGAGGTCCTACGCCGACAGGATCAGGGCTTCGGAGCTTGAGAAGTGCCTCCAGAAGATCGGCGAAGACTCCCTCACCAAGAAGATGAGAAGATCCATCGAGGAGCTCAGCACCGGCATCGTGAACAAGCTTCTCCACGGCCCATTGCAGCACCTGAGATGTGACGGCAGCGACAGCCGCACCCTCGATGAGACGCTGGAGAACATGCACGCCCTCAACAGGATGTTCAGCCTCGACACCGAGAAGGCGATCATTGAGCAGAAGATCAAGGCGAAGGTGGAGAAGTCCCAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031606