BGIOSGA031616

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Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031616| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031616, complete gene.| tag = OsI_341...")
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Gene Name

BGIOSGA031616

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031616, complete gene.

LocusTag

OsI_34178

Ensembl Transcript ID

BGIOSGA031616-TA

Ensembl Protein ID

BGIOSGA031616-PA

Length

5324

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17801462..17806785

Sequence Coding Region

17806213..17806785,17804872..17804923,17804703..17804787,17804054..17804099,17803833..17803957
,17801462..17801987

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17801462..17806785 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17801462..17806785 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGGATGAGATCGAGGGAATCGGCAAGCTCAACTCCCCTGAGAAGAAGAAGGAGAAGGAGAAGAGGAGGCGCAAGCACAAGCCCGACGAGGTGAAGGAGGAGATGGTGGTGGACGCCATACCCAAGGAGGAGGAGAATCTCAAGTCCCCCGAAAAGGGATCACCGAAGAAGAAGGAGAAGAGGAGGCACAAGCACAAGCACAAGCCCAAGCCCGACGGGGCACAAGCCGTACTCAAGGAGGAGGAGGAGAGCAACAGCAAGTCCAAGGCCCCGGCGGAGGGCGAGAAGAAGAGGAAGAAGAAGAAGCTGGTGACGGTGAAGCTGAGCGACGAGCTGATGGGATACCTGCGGACCAAGGATGTGATGGCCTACCTCGCGCGCGAGACACCTCGCCCGCTCCCGATCGATCCGGGCGTCGCGCAGCACATGTTCGTCGACCAAGAACTCAGGCAGGAAATCGCCGCCCAGGTTCACGAGAACGGGGAATTCGACGCCTTCGTCCTCTACCAGTACCGCACCAAGGGCTACGCCGAGATCCAGCAGGAGGTCACCGACGACGACGACGAGACGAAAACGACAAATGGGCTGCCTGCCTATGCTGGACCTGGTGGATGGAACGATCCTGGCATGCTTGAAGTGGGCGATGGGGAGATGTCTGAATCGGAGTACCGCTCACAGTTCAGTATCTGTGGGCACTATCATAGACTAGGTGTCCAAGGAAAGAAAATGCAAGCTGACAATGGATTGGAGGTTTGGGCCAGGTCACTCAGCAACAACAGGAAGGATGTGGTACTCTGGAACAGGCCATCACTGCGCATTGGTCGAGCATTGGACTCACTGGGTCAGTGGCTGTCACTGCTCGTGATCTATGGGCGCGGTAGAGCGAAGGGGGAGCTGGAGGGGAACGGCGGTGGCGAGGTGGAGGAGGAGGACGCCGCTCCGACGAAACTCCCATCCGGGGCGAGGGAGGAGCGGAAGACGGAGACGACGACAGCGGGAGGGAAGTGGGGATGGAGGCGGCGAGGAGGGAGTTGGCCTGCCGACCCGTTGTCGCCGCCGCCGCCGCCGTTGTCCTTCCGGCCGTTGCTCATCCGCGAGGCCATCCCCAACGAGCCGCCGCTCCGGCCGTCCTCCCCCGTTCCAACGCCATGGCAGCCAGAGTTCTTCGGCGAGGGTATCACCGTCAACGGCAAGGCCTGGCCGTTCCTCATCGTCCACCGCCGCCGCTACCGCCTCCGCATCCTAAACGCCATCAACGCCCGCTACTTCAATGTCTCCCTCTCTAACAGCTTCTCCATCCACGTCTTCGGCTCCGACGCGTCGTACCTCTCGGCCCTAGACACCGTCACCAACCTTCTCTCCCTGGCCGAGATCTTCGACGTCATCATCGACTTCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MERDEIEGIGKLNSPEKKKEKEKRRRKHKPDEVKEEMVVDAIPKEEENLKSPEKGSPKKKEKRRHKHKHKPKPDGAQAVLKEEEESNSKSKAPAEGEKKRKKKKLVTVKLSDELMGYLRTKDVMAYLARETPRPLPIDPGVAQHMFVDQELRQEIAAQVHENGEFDAFVLYQYRTKGYAEIQQEVTDDDDETKTTNGLPAYAGPGGWNDPGMLEVGDGEMSESEYRSQFSICGHYHRLGVQGKKMQADNGLEVWARSLSNNRKDVVLWNRPSLRIGRALDSLGQWLSLLVIYGRGRAKGELEGNGGGEVEEEDAAPTKLPSGAREERKTETTTAGGKWGWRRRGGSWPADPLSPPPPPLSFRPLLIREAIPNEPPLRPSSPVPTPWQPEFFGEGITVNGKAWPFLIVHRRRYRLRILNAINARYFNVSLSNSFSIHVFGSDASYLSALDTVTNLLSLAEIFDVIIDFS</aaseq>

Gene Sequence

<dnaseqindica>1..573#1863..1914#1999..2083#2687..2732#2829..2953#4799..5324#ATGGAGAGGGATGAGATCGAGGGAATCGGCAAGCTCAACTCCCCTGAGAAGAAGAAGGAGAAGGAGAAGAGGAGGCGCAAGCACAAGCCCGACGAGGTGAAGGAGGAGATGGTGGTGGACGCCATACCCAAGGAGGAGGAGAATCTCAAGTCCCCCGAAAAGGGATCACCGAAGAAGAAGGAGAAGAGGAGGCACAAGCACAAGCACAAGCCCAAGCCCGACGGGGCACAAGCCGTACTCAAGGAGGAGGAGGAGAGCAACAGCAAGTCCAAGGCCCCGGCGGAGGGCGAGAAGAAGAGGAAGAAGAAGAAGCTGGTGACGGTGAAGCTGAGCGACGAGCTGATGGGATACCTGCGGACCAAGGATGTGATGGCCTACCTCGCGCGCGAGACACCTCGCCCGCTCCCGATCGATCCGGGCGTCGCGCAGCACATGTTCGTCGACCAAGAACTCAGGCAGGAAATCGCCGCCCAGGTTCACGAGAACGGGGAATTCGACGCCTTCGTCCTCTACCAGTACCGCACCAAGGGCTACGCCGAGATCCAGCAGGAGGTCACCGACGACGACGACGAGGTGTAGCTAGAATCTGCAGGGAATCAATAATGGTTGGTGGTAAGGAGCAATGATCTGTGATCCAGCTAAATATACTAGAGTGCTTCTGCTCACTAATCATTATTAGGATATTACTATGTATAATGGTGTTATTATTATTGCCCGTATCTTTGCTACTTGTAACTAAACGTGTGGGAATCACAAGTAACTGCTTTCGTAGTTAAACCGAGTGAATTGCTAACGTATTGGAATGAATGGGATTGCAACTGTGATTTGACTCTGATTGGCATAGTACTTGTCATAGTAGTTGTGATCCTAAATGTGAATGATCTTGGCTAGCTAACCCGAACGCTTCATGTTACTCTCTGTTTGTGCTAAAAGCGATTCGGATTTCTACTATTTATGACTTGTTACCTTCCTGATCTAGTTAATTCTCTTTTTGTGTGATCCTATTCGAATTATGTTTGAAAAACATTTCAATTATATCGCCTCATGTGGCCGTATCTCATTCAGAGCAGCTTCTTCTATAATGCTGTTTTTCTCTGCGCTTTTGCCATTCATCTATTCATTTTGATTAATCTTCAAATACCTCAGAAGTGTGAATCTTCTGCGGTATTGTTCTTTTCTTCATGTGCCAACGCAGTGTGGTTTGGTGCTTTTTTTCATATTGTAGTAGATATCACTCTCCCTTGGTTATACAATCAAGGACTTTTTAGTGGAGGAAAGAGTAAAGATTCCATTCTTTTGTACATTTGTTTATAGAAGCAATACGTGTGCTGCAAAACTTTGTGAGCCTTATGCATCGTACTGCTGGCTAAATGTTTTCATGTCTAATGAATAGTACACTAGAATGAGAAATGCCATGAAGACCTACAGTAATATTATGTTGTCACTCTGTAAATGTTTGGCTTGCTGTAAAATCATTGGCTGGGTCGAAGGAACAACGAAGCATTGTTGATTCCCTAGGGCCCCATGCCTTTTCTGTACAGGGGATAAGAAAATCTTGCTACATGGTTAACAAGCCGGAGAACAACTGATGACATCACTGACAACTGGGGCAGGTTCTGCTCATCTTCTCTGTAGTATCCTTTACATAATACTTGAGTTTTTCAGTACTCCCTCGTTTCAGAATGTAAGTCATTCTAACATTTCTCATATTCACATTGATATTAATAAATCTAAACATATATATCTATCTAGATTCATTAACACTAATATAAATGTGGAAAATGCTAGAATGACTTATATTGTGAAAAGGAGGAAGTACTGATCATGATTGCGCTGTTATTTCAGTATGACATCGTGTGCAGACGAAAACGACAAATGGGCTGCCTGCCTATGCTGGACCTGGTGGATGGAACGGTAAGAATTTGAGATGAATGTGTTCTGCTCAACCATTTGAGAGCTTCGAACCGATCAACAGATGCTGTTGAACATCAATTGCAGATCCTGGCATGCTTGAAGTGGGCGATGGGGAGATGTCTGAATCGGAGTACCGCTCACAGTTCAGTATCTGTGGGCACTATCATAGGTACCATAGCATGTTTTGTGTACTAACAGTTTTGCTGCAATGTTGAATATTTTCTTTGTTGCATTTCCTCACAGCAAGCTTTGCTTCAACTGTTCAGGCTCCTCTTTTGATTGGATGTGATGTGCGCTCAATGTGGCCCCGTTTAGTTTCCCAAAAACATCACATCAAATCTTTGGACACATGCATGAAGCATTAAATATAGATAAATGAAAAAACTAATTGTACAGTTAGAGAGGAAATCGCGAGACGAATCTTTTCAGCCTAATTAGTCCATGATTAGCCATAAGTGCTACAGTAATCCACGCGCTAATGACGGATTAATTAGGCTCAAAAGATTCGTCTCGCAGTTTCCAGGCGAGTTATAAAATTATTTTTTTCATTCGTGTCCGAAAAACCCTTCCGACATCCGGTCAAACATCCGATGTGACACCCAAAAATTTTCTTTTTGGAAACTAAACAGGCCCGAGCCAGCAGATGAAAGACATACTCAGCAACTGGGAGGTCATCGCTGTGAACCAAGGCAAGCCTTCTCTTTCACATGCTTAGATCTAGCCATATTCTTTGATATTTCACCATACTCATATAACAACTTTGTGCAGACAGACTAGGTGTCCAAGGAAAGAAAATGCAAGCTGACAATGGATTGGAGGTAATCCCTGTTCATCTGCATCAGTGGTTTTCAAGTTTCAGCCTTGTCTTTGTTCCATGCTCTGAAGCTGGCAATACTGTGTTAATTTGTCGATAGGTTTGGGCCAGGTCACTCAGCAACAACAGGAAGGATGTGGTACTCTGGAACAGGCCATCACTGCGCATTGGTCGAGCATTGGACTCACTGGGTCAGTGGCTGTCACTGCTCGTGATCTATGGGCGGTAAACTTGCTTTCTTCAGAGCTCAAAGTACAACATCACTCTTCAGAATTCAGAGTTCATAACATTTCTCTCTTGCGATTTGCAAGGATTGGTAGAGATGGAAATGGATGCCATTTGGTTATATATATGCAGAAATAAGCTGTAAGCCTGTGCATTTAAGGTGCCGTCAAATGCGGTGTATTGCTGAAGTTTGTTGTGAAAGTTGCAGCAACAAAGCGGCATTCCTGCCACTATCTTATAAAGAAATATACTCGCCTGAAGACAAATCTGTGGCAAAAGCCTTCACAGTAGAGAGTTGAGACATTGCAAGACATCACAACTAGACAGAATGCAAAACACATTGTGGATCAAAACACTATCAGCTACAACTAAGGATTGGGTTTGCACCAGCCAAATCACCTGCATCTGTTGCTTCAACAAAACAATTAATATCCACGAGGCTGCCGTCTCCGCCTCCCCGCCCACCGGCGTCGGAAGGATCCAGTCCGTTGGTCAGTACGGCCGTGATTCAAGGGGCCCATATCTGTCGGGCCGGAACGGGACTCTGACTTAGATGTGCCCATGTTATTTGGTCTGGAAGAGATTTTGATTTGGAATAAATCCACTTCGACTCCATTAGCTAGTGAGCGAATCTGATTGGAAAAAGTATACCCAAGGTCCCTCAACTTGTCATCGAATTGCAAAATCGTCCTCCAACGGTTTTACAACTTATAAAACCGGTGCAAATTAGACTCCTAGACGGTTTTGACTCCGGTTTTATCCAACGTGACAGCTGAATCAGCATGGGACCCACGTGGGTCCCATATGCCAGCCCCTTCTTCCCCTCCCTCTCTTCCTCTCTCCTTCTTCCCCTCCCCATGCAGGGCAGCCGGCCGGTGGGGGAGCGCGGGAGACCGGCAACGGGCGATGGGCGACGAGGCGGCAGCAGCGCCGCACGGCCTCCTGCGCCCGCCCTCCCAGCCAGGGGAGCCGGGGGAGGAGCTAGGTATGGCCGTCGGGGGCGGAGCGGGGCTCGGCCGGCGGGGCGGAGCTGGGTGCAGGCGGCAGCCGGTAGGGGAGGAGCTGGGCGGCTGCGGGGGGGAGGGCGGGCGCCCGACGGCCTCGATGACGTCCTCTGGCCGGCGACATGCCCATCGGCGCCACCCTCACGAAGATGGTGGCCTTCGTCGACGACGTCTTCGAAGTCTACACCGTGCCCAGGCCCACTTCAACCTCTCGCTGCAAGATGCCCCGAATGAAACTCAGCAGCTAGCCTATAAATAGTCCTGACAAATTATGGGCCAACACTTCTTGACAAAAAGGCCATTAAAACCATCAGGACCAGGAGGCCTGGTAATGGACAATTTTTTCACAGAAAAAGTGCACCGAGGTCCCTCAACTTGTCATCGAGTTACAAAATCGTCCCCCAACCACAAAACCAGATATATGACATCCCTCAAGTTACAAAACCGTTCAATTTAGGTCCTTCGGTGATTTTAACCCCGGTATTATCCGACGTGGCAGCTGAGTCCGCATGGGACCCGCGTGTCAGACTGACCACGTCACCACTTCTTACCCTCCCCATCAACTCACTTCCTCTCTCCTTCCCTCTCCATGGGCAGTGGCCGGCGAAGAGCAGCCAGGGCGGCGCGACAGGACGGTTCGGCGGGCGCGGTCGCCGGTGCAGAGGAGCACGCCACGGTCGGGCGTCGCCATGGCCTCTCTTGTCCCCGTCGAAGTCACCCCGCTCGACGAGGTCGGCGGCGGCGAGCATGGTGTCGCGTCGTGGCGTGCCCCATTGAAGTCACCCCGGTCGACGAGGTCGGCGCACGCGAGCGGGGAGGGGCGTCGGTGGTGGGACCACAGCGGTAGAGCGAAGGGGGAGCTGGAGGGGAACGGCGGTGGCGAGGTGGAGGAGGAGGACGCCGCTCCGACGAAACTCCCATCCGGGGCGAGGGAGGAGCGGAAGACGGAGACGACGACAGCGGGAGGGAAGTGGGGATGGAGGCGGCGAGGAGGGAGTTGGCCTGCCGACCCGTTGTCGCCGCCGCCGCCGCCGTTGTCCTTCCGGCCGTTGCTCATCCGCGAGGCCATCCCCAACGAGCCGCCGCTCCGGCCGTCCTCCCCCGTTCCAACGCCATGGCAGCCAGAGTTCTTCGGCGAGGGTATCACCGTCAACGGCAAGGCCTGGCCGTTCCTCATCGTCCACCGCCGCCGCTACCGCCTCCGCATCCTAAACGCCATCAACGCCCGCTACTTCAATGTCTCCCTCTCTAACAGCTTCTCCATCCACGTCTTCGGCTCCGACGCGTCGTACCTCTCGGCCCTAGACACCGTCACCAACCTTCTCTCCCTGGCCGAGATCTTCGACGTCATCATCGACTTCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031616