BGIOSGA031620

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Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031620| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031620, complete gene.| tag = OsI_341...")
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Gene Name

BGIOSGA031620

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031620, complete gene.

LocusTag

OsI_34173

Ensembl Transcript ID

BGIOSGA031620-TA

Ensembl Protein ID

BGIOSGA031620-PA

Length

4842

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17768920..17773761

Sequence Coding Region

17773740..17773761,17773527..17773651,17771989..17772060,17771384..17771893,17770962..17771276
,17770812..17770868,17770310..17770636,17770024..17770230,17769860..17769946
,17769680..17769774,17769327..17769461,17768920..17769241

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17768920..17773761 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17768920..17773761 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGACTCCGACGAGTACGTCGACTTGCCCGTGTCGGATGAGGAGGAGTGGGAGGATGGGGAGTCGGAGGAGGACGAGGAGAAGGTGGGCTCTCGTAAGAAGGCCAAGGTTCACGCGAAGCAGCTCAAGAGGCTCCAGGAGAAGGATCCTGAGTTCTACAAGTATTTGGAAGAGTGTGATAAAGAGCTTCTGGAATTCGACGATGATGACTTTGATGATAATGAAGGAAGTGCTGAGAAACATAGTTCTGTTCCTAAAGAAGAACCGAAAGAAATTGTAAAGCCTATTACAATGCAAATGGTTGATTCCTGGTGCCAAGGAGCAGAAGATGGGAAGATAGGTTCTATCCGGTCTATTCTCGAAGCATTCCGGAAAGCCTGCCATTATGGTGAAGAAAGTGGAAATAATTCTGCACCGAAATTTAGTGTCATGTCTGGCAGTGTACTTGACAAAGTCATGCACTTTGTTTTGAAAAACATGGATAGAATCCTTCGTGAATTACTTGATGCACCTAGCTTTGGGGGGAAGAAAGAGACAGTTAGTGAGCTGATGATTACTAAGCAATGGAAGAGGCATGGGAGATTAATGAGGTTATACCTTGTAAATGCACTCCACATGATAACAGAGTTGACTGATGAGCAAATGGTAGCATTTACTGTACATCGTGTCAGAGCTTCTGCTGTTTTTCTGGCGGCCTTCCCTGCACTCCTCAGGAAGTATGTAAAGGCTCTGCTGCATACCTGGTCTAGAGGACGAGGTGCTATGCCTCTTGTTTCATTTTTGTTCCTTCGAGATTTGTGCATTCAACTAGGTTCGGAGTGCCTTGATACGTCCCTCAAGGGTATCTACAAGGCTTATTTGGTGAACTGTAAATTGTCCAAATCAATCAGTGGATCAAAATTGCAGCACATTCAATTTCTTGGTAATTGTGTCAGAGAATTGTACAATGTGGACCCACAAAGTGCATATCAGCATGCTTTTGTTTTCATCCGTCAACTGGCAGTCATCCTAAGGGGAGCTCTTACTGAAAGAGGACCAAAGACATCGAAGGACAAAAAGCAGAAAGAAAGTATCAAACCAACGAAGAAACGGATGGAGAAATCCTACCAAAAAGTTTATGATTGGCAATACATATTCTGCCTTGAGCTTTGGACAAGTGTTGTGTGTGGATGTAGTTCTGAGGAAGACCTTCGACCTTTGGCTTATCCACTAACCCAGATAATACATGGTGTGGCATGCCTGGTACCAAGTGCGCGTTACTTTCCTGTACGCCTGAGATGTGTGAAGATGCTTAATCGCATTGCTGAAGCTACTGGTACCTTCATTCCGGTGTCTTCCCTGCTGCTTGATGTGCTGGAAATGAAAGAACTTGGAGGGAAACCAGATGCTGTAGGCAAAGCAGTGAATCTGTTCAGTGTTAAACAGGTAGATAAGAAAACAGTGAAGACACGTGCCTTTCAGGAAGCATGCATCTTTTCCGCGGTTGATGAGTTGGCTAAGCATTTGGCCCAATGGAGCTACTCCATTGCCTTCTTTGAGATGTCCTTTTTAACACTTGTCCGGCTTCAAAACTTTTGCAAAACCGTTAAGGCTGACAGATTCCGGAGAGAGATCAAAGATCTTATCCATCAGATAAAGGCTAGTGCTGAGTTTGTAAGCTCAAAGCGTGCAGGAATTGGATTCTCTCCTAATGATCCAGCCGTGGATTCATTTCTACAGGTTGAGAAGGAAGCAAAGTCAAGTCCTCTATCAAAATATGTTGCTACTCTACATCAGAGAAGTCAGGACAGGATGGACTCTCTGGACGACACAAGCGTTATTGTGGGGGCAGAGTCCTCAACCTTTTCACGGAGGTTGTCAGAAGCACAGAAGCGACAGGATGAACAAGATGATGGCGAAGACACCATTGCATTCAGTAAGAACTTGTTGACTGAAAAGAAGAAAACCAAAACTCCAAAGGAGAAGAGCAAGAAGCGAGCCCGTAATCACGACGATGTCGCTACGGAGGAGGATATTGTTGAGGATTTGATCTTGAGTTCAGACGAGGAAGACGAAGATGAGGACAAGAATATGGAATCAGATGAGGATGATGGCTCTATGCCTGTTGAAGATGACAGCGATGACGATTTCGTCGACCCAGACAGCCAGTGGAAGAAACAGAAGAAAGAGAAATCAAAGAAACGGAACAAGCGGCAACCCTCAAAGAAGGGTTCGTCAACAACAAAAAGAAAAGAGAAAATCCCACATCCCAAGAAGAAGGCGAAGCATTAG</cdnaseq>

Protein Sequence

<aaseq>MSDSDEYVDLPVSDEEEWEDGESEEDEEKVGSRKKAKVHAKQLKRLQEKDPEFYKYLEECDKELLEFDDDDFDDNEGSAEKHSSVPKEEPKEIVKPITMQMVDSWCQGAEDGKIGSIRSILEAFRKACHYGEESGNNSAPKFSVMSGSVLDKVMHFVLKNMDRILRELLDAPSFGGKKETVSELMITKQWKRHGRLMRLYLVNALHMITELTDEQMVAFTVHRVRASAVFLAAFPALLRKYVKALLHTWSRGRGAMPLVSFLFLRDLCIQLGSECLDTSLKGIYKAYLVNCKLSKSISGSKLQHIQFLGNCVRELYNVDPQSAYQHAFVFIRQLAVILRGALTERGPKTSKDKKQKESIKPTKKRMEKSYQKVYDWQYIFCLELWTSVVCGCSSEEDLRPLAYPLTQIIHGVACLVPSARYFPVRLRCVKMLNRIAEATGTFIPVSSLLLDVLEMKELGGKPDAVGKAVNLFSVKQVDKKTVKTRAFQEACIFSAVDELAKHLAQWSYSIAFFEMSFLTLVRLQNFCKTVKADRFRREIKDLIHQIKASAEFVSSKRAGIGFSPNDPAVDSFLQVEKEAKSSPLSKYVATLHQRSQDRMDSLDDTSVIVGAESSTFSRRLSEAQKRQDEQDDGEDTIAFSKNLLTEKKKTKTPKEKSKKRARNHDDVATEEDIVEDLILSSDEEDEDEDKNMESDEDDGSMPVEDDSDDDFVDPDSQWKKQKKEKSKKRNKRQPSKKGSSTTKRKEKIPHPKKKAKH</aaseq>

Gene Sequence

<dnaseqindica>1..22#111..235#1702..1773#1869..2378#2486..2800#2894..2950#3126..3452#3532..3738#3816..3902#3988..4082#4301..4435#4521..4842#ATGTCGGACTCCGACGAGTACGGTGCGTTCCCCGCCGCTTCTTCTCCTCGTCCTCTCCTCTATGCACTGTTTGTGTTAGTTTTGACAACGTTTGGCTTTGCTGGGTTTAGTCGACTTGCCCGTGTCGGATGAGGAGGAGTGGGAGGATGGGGAGTCGGAGGAGGACGAGGAGAAGGTGGGCTCTCGTAAGAAGGCCAAGGTTCACGCGAAGCAGCTCAAGAGGCTCCAGGAGAAGGTTCGTCTCCGTCCTCGCCGTCTCCTACGATTCGCGCACCCTTCTCCCAAGCTTATATTGCTTACTATTATTACTTGTTACTAGTAAGCATCAAAAGTAGCATCTGAATTGCTCGGCTCCATTCCATATGTAATGCCTATGTTGATTTAGCTTTGGGCTGTTTATACTAGGATTGGGGATTCTGGTATGTGTTTTTTATTCTGGTATGTGTTATTCTGGTATGTGTTTTTTATTCTTATATTTATACTAGGACTGAGCACGCAAGGCAGTGAATGTTAGAAGGTATATTGCATGCTTAATAGGTGGATATTGGCTCGCTCTCGTATGCATTTGGTAAACTTGTCTGGTTGGCCCTTGTTGATTGATTTTATTGATTTTGGAAATGGACTGCAATCTTCCGAGTTTTACACGCGGAAGTTTGTGCAGAGTACTGAATAGTGACGTGGTTGCTGCAAATAAGTACTATAAGCAAGGCATACAAGTTCCTTAACAAATATAATGATATATTTTAGCCATTCTGATCATTTTGAAGAAGGTGATGGTAAACTAAATCTCAAGTTCTGATTGTGCATTTGGTAATCAGGGCAAGTACTATAAGCCCCTATTTATTGCCCATAAATTTGCCACATAGGATTAGATGATGAGTTGGAGGAGAGAAGTTAGGAGAGAGAGAATGAGCCATCCCTCATGCAAGGGGCAACCTCCACACAATCTCCAAGAAAAATGTAAGATGACGTGAGAGTAAACTAATATTGGGGTTTGTGTACTAGATGTGACATGCTGTATTTGTTACCTCTTAAGTAATGAGAAGATGACATGGTTTAAATTAGATGTGGCACTCACCTCCACTATAAAACTTGCCCTCAGGAAGCTAGTTGTAATGTCATAGGGATTGCTGGTATGTAAAGAGTACTTTTGATATCTAGAATTACGTAGCTCAGTACTGTTATGATTTTTTTCTGCTTACGTTGGATTTATAGCTGTTTATACATAAAGGTAGTTCTACAGTTCTACTTGCACTTTTAGTGTGGAATAACCTATGGCTCTGGTTTAGCGGCCCTGGCATTGCAATTGGGACAGATGAAACTGAAGAAATCATATGTGTTAAGCACATCCAGATTCCAGTTTAAGTACTTTCAGATTAGTTGCTTGCACTTTGAACTAGCCCTCTTTTTTGGAATAAAGAACATGTTATTGACTCGACTTTTGGACAGTCTTATTCTAAAAATAATTGATACTTTCTGTTTCCTGGTAGTGACCATTAGACGGCTTTTTACAAATTTAGATGATAATTATCATTGTTCAATTTATTGCTGAAATTCTTATCTGTATGCATCATTGTTAACACTGCAACAACCAGGAAGTTTTTCTTGAGCTAATCATTTCTTCCATCCCTAGTTCTTGTCATATCTGTGCTGCTGTATTCTGTCAGCTGCTTATGATGGCTGCAAAACTCTTATTTGTAGGATCCTGAGTTCTACAAGTATTTGGAAGAGTGTGATAAAGAGCTTCTGGAATTCGACGATGATGACTTTGATGTAACACAAAACTATTTATTCATTTATTTTGCATTTTTTTTCTTCTTGCTTGAGAGAACTATATACATTGTATGTTTGCTGCATATTTTGTTTAGGATAATGAAGGAAGTGCTGAGAAACATAGTTCTGTTCCTAAAGAAGAACCGAAAGAAATTGTAAAGCCTATTACAATGCAAATGGTTGATTCCTGGTGCCAAGGAGCAGAAGATGGGAAGATAGGTTCTATCCGGTCTATTCTCGAAGCATTCCGGAAAGCCTGCCATTATGGTGAAGAAAGTGGAAATAATTCTGCACCGAAATTTAGTGTCATGTCTGGCAGTGTACTTGACAAAGTCATGCACTTTGTTTTGAAAAACATGGATAGAATCCTTCGTGAATTACTTGATGCACCTAGCTTTGGGGGGAAGAAAGAGACAGTTAGTGAGCTGATGATTACTAAGCAATGGAAGAGGCATGGGAGATTAATGAGGTTATACCTTGTAAATGCACTCCACATGATAACAGAGTTGACTGATGAGCAAATGGTAGCATTTACTGTACATCGTGTCAGAGCTTCTGCTGTTTTTCTGGCGGCCTTCCCTGCACTCCTCAGGAAGTATGTAAAGGTTTGTAGCTTTGGCTCCTCATCCATCTTTAGTAACCTTTCGTGTCATCTGATGTCTCTGCAGAGTTTGTAATTTCTTTTATTTTCACTTGACTAATTCGATTACAGGCTCTGCTGCATACCTGGTCTAGAGGACGAGGTGCTATGCCTCTTGTTTCATTTTTGTTCCTTCGAGATTTGTGCATTCAACTAGGTTCGGAGTGCCTTGATACGTCCCTCAAGGGTATCTACAAGGCTTATTTGGTGAACTGTAAATTGTCCAAATCAATCAGTGGATCAAAATTGCAGCACATTCAATTTCTTGGTAATTGTGTCAGAGAATTGTACAATGTGGACCCACAAAGTGCATATCAGCATGCTTTTGTTTTCATCCGTCAACTGGCAGTCATCCTAAGGGGAGCTCTTACTGAAAGAGGACCAAAGGTATGTGTAGTTGAACTCTGATGATCATATACTGCAATGTAATTATTTACTTGGCAGCTGACAAGTTTTGTGGTCCCTATTTCATTTTGCAAGACATCGAAGGACAAAAAGCAGAAAGAAAGTATCAAACCAACGAAGAAACGGATGGAGGTATGTCATTATTCCAATGTTGCATATGTACTATCGAGGAATAGAGTCCACTTTGGGATAACACTATTGCTTTCTTTCTTATGTTAGTTTAGTTTTACTCTCTATTCTATATTCTATTACTCTAACTGAGCCTTTCTTTTCTGACTTGTTATTTGCTGACCTTGTTCTTGTGTAGAAATCCTACCAAAAAGTTTATGATTGGCAATACATATTCTGCCTTGAGCTTTGGACAAGTGTTGTGTGTGGATGTAGTTCTGAGGAAGACCTTCGACCTTTGGCTTATCCACTAACCCAGATAATACATGGTGTGGCATGCCTGGTACCAAGTGCGCGTTACTTTCCTGTACGCCTGAGATGTGTGAAGATGCTTAATCGCATTGCTGAAGCTACTGGTACCTTCATTCCGGTGTCTTCCCTGCTGCTTGATGTGCTGGAAATGAAAGAACTTGGAGGGAAACCAGATGCTGTAGGCAAAGCAGTGAATCTGTTCAGTGTTAAACAGGTATATTTTCTCGTAATACAACACTTCCTTTGGGAGGACTACTTTGAAAAAACTTTTAATAGGTACTTTTGTCTGGCAGGTAGATAAGAAAACAGTGAAGACACGTGCCTTTCAGGAAGCATGCATCTTTTCCGCGGTTGATGAGTTGGCTAAGCATTTGGCCCAATGGAGCTACTCCATTGCCTTCTTTGAGATGTCCTTTTTAACACTTGTCCGGCTTCAAAACTTTTGCAAAACCGTTAAGGCTGACAGATTCCGGAGAGAGATCAAAGATCTTATCCATCAGGTTTGTGAAGCATGTAAGAGAGAATTGTACCTAACTGAATGCATGTATGCTGATGTTTGTATCCTTTGTGATTCCAGATAAAGGCTAGTGCTGAGTTTGTAAGCTCAAAGCGTGCAGGAATTGGATTCTCTCCTAATGATCCAGCCGTGGATTCATTTCTACAGGTATGGTTGGTCCTGTTGGATGTGCACTGTATATTTGTTATACTCATTTAGTGTCATTTTGTGAGATATATAATGTTCATTTCAGGTTGAGAAGGAAGCAAAGTCAAGTCCTCTATCAAAATATGTTGCTACTCTACATCAGAGAAGTCAGGACAGGATGGACTCTCTGGACGACACAAGGTTGGTTACTTGGTTTCATTGATGTTCATCTAAATTTAGGAGTCAGCCAGTTGAGTCGTAGCACTTATAAACAGAAATGCACCAATTTTTTTTTACCTCGTCGTCTTATCATGCAACATTTTCTAGTAGTCTTTACATGTGAGTGGAGCTATGCTTGATGCTCCATATTGCGAGTACATATAATTAATAAAATTACTGATCATTCTTTTCCCTATCAGCGTTATTGTGGGGGCAGAGTCCTCAACCTTTTCACGGAGGTTGTCAGAAGCACAGAAGCGACAGGATGAACAAGATGATGGCGAAGACACCATTGCATTCAGTAAGAACTTGTTGACTGAAAAGAAGAAAACCAAGTACGCTATCACCTTCCTCTTTGCCTCTTTTTGTTTCTTTTATTGGAATGGTAGACGTTATATGTTTCCTTTCGGGGGTTTGCAGAACTCCAAAGGAGAAGAGCAAGAAGCGAGCCCGTAATCACGACGATGTCGCTACGGAGGAGGATATTGTTGAGGATTTGATCTTGAGTTCAGACGAGGAAGACGAAGATGAGGACAAGAATATGGAATCAGATGAGGATGATGGCTCTATGCCTGTTGAAGATGACAGCGATGACGATTTCGTCGACCCAGACAGCCAGTGGAAGAAACAGAAGAAAGAGAAATCAAAGAAACGGAACAAGCGGCAACCCTCAAAGAAGGGTTCGTCAACAACAAAAAGAAAAGAGAAAATCCCACATCCCAAGAAGAAGGCGAAGCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031620

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA031620&oldid=30842"