BGIOSGA031623

From RiceWiki
Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031623| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031623, complete gene.| tag = OS10G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031623

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031623, complete gene.

LocusTag

OS10G0495300

Ensembl Transcript ID

BGIOSGA031623-TA

Ensembl Protein ID

BGIOSGA031623-PA

Length

5112

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17754497..17759608

Sequence Coding Region

17758937..17759608,17757407..17758357,17757152..17757241,17756993..17757061,17756080..17756220
,17755754..17755802,17755198..17755301,17754497..17755072

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17754497..17759608 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17754497..17759608 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGGCGGCGAACGTGATGCTGGCGATCCACGAGAAGAGGACCACCCCCACCGACCTCTACCGCCCGCTCCGCCTCTACATCGCCTCCGCCTACTCGGAGCGGGAGGCGGCCGCGGCCGACGACGACCTCGCCGCGGTGCGCGACCTGCGCGCCGACGTCGAGCAGCCGTCGCTCCCGGACCCGTCCTCCCTCGAGCGAAGGCGGGACGCGCTCCTCGCCTACGCGCGCGCCCTGTCCCTCGTCGAGCCCCGCTTCCCCATCTCCTCCGACCGCGCCCACGTCCACTCCCTCGCCTTCACCTGGCACGACGCCTTCAAGACCGGCAAGAAGGCCAGCGTCGCCTCCATCCACCTCGAGAAGGCCGCCGTGCTCTTCAACCTCGCCGCCGTCTACTCCCAGATCGCGCTCGCCGCGGACCGGGCCACCGACGTCGGGATCAGGACCGCGTGCGGCTCGTTCCAGAGCGCGGCGGGGGCGTTCGCGTGGATGAGGGAGAGCGGCGTCGCCGCCAAGGCCGTCGCGGCCGGGGCCACCACCGTCGACGTCACCCCCGAGTGCGCCGCCATGCTGGAGAAGCTCATGCTCGCGCAGGCGCAGGAGTGCTTCTTCGAGAAGGTGATAGCCGGTGGGAAGCCGCCCGCGCTGTGCTCCAAGGTTGCCCGGCAGGTGGGCATATTCTATGAAGAAGCCTATGCAGCTCTTAGCGCAGCTCCTCTCAGTCAGCACTTTGATAAGACATGGGTTTCTCATGTCCAGCTGAAGGCAGCTCAGTTCTATGCTGATGCTTGCTATAGGTGTTCTTTGGATCTTCACGAGAAAGAAGAAATTGCACAGGAAATTGCACGTCTGAAGATTGGAATTAGCGCTTTGGCAGATGCCAAGAAGGTGGCCAGGGGAGTTGCTGCCCCACTTCTTGATTCTGTTAATAAGCTGGAGAGTAATATGAAGACCAACTTGGAGAGGGCTATGAAAGAGAATGACCGTGTTTATCTGATGAGGGTTCCGGATGCTAGTTCTCTTGGCGCGCTCCCTGCAGCATCACTTGTAAAGCCTACATCTTTGGCTGAAGTTCTAGATGCTAGCAAAGAGAGGCTTTTTTCATCACTTGTGCCTGATGGAAGCATGAAAGCACTTTCCAAGTACACTGAGATGGTAGATAACATCATCAGGACTCAAGCGGAGAAATTACAGCAAGCTAGTGAGATCACTAGAGTTAGGTTGAAGGAAATGGACTTGCCCGATTCCATTCTTTCATTAGAAGGTAATATCACCTTACCTTTAGATTTGAAGGAAGACGTTGAGGCTGTTCAGATAAGCGGAGGCCCTGCTGGATTGGAAGCGGAGTTGCAGCAGCTTAGGGATTTAAGCAGAGTCAATCAGGAATTACTTGTTCAGACCGAAGAGATGCTGCAGAAGGAGGCGAATGAAGATGCTCAGTTTCGGACGCAATTCGGGAGTCGTTGGACTAGACCTCAATCTAGCACCCTAACAAAAAACATTCAAGACCGATTGAATCTGTTTGCTTCTAATCTTAAGACAGCTGGTGATAGTGATTCTCAGATTGAGCGAGGTTTGAAGGAGAGCTATCCATTGATGTCTATTCTTGACAGAAGACCGATAGAGTCTGCACTACCGAGTATTTCTAGGCCTATTATGTCCTTGGATGGGAATGAGGATGCTATTGTTGGAGCCCTTAAACAAAGCTTGAGGCAACTAGAATCTCTAGGAGCACAGAGAGCAGGTCTTGAAGACATGCTTAAAGAAATGAAGAGAAAGGATGACATACTCCCTAAATTGATGGCCGGTGTTGGATCACACGATGATCTTTTTAAGAAGGAGATTTCAAAGTATGATCCTGTCTGTGCTGAGATAGCTGATAACATTGTGGCGCAAGAACAACTGCTGCTACAAATACAGGCACAAAATGAACAGTTTGCTGCGGTGTTCAACCTAGAGGATTACAAAGTTGCTCGTGAGAGATGTTACAAGCAAATTGCTGCGGCTGTTGCTAAATACCGAGATATTAAGAAGAACATTAATGAAGGCCTCAATTTTTATGTGACATTGCAGGAAGCAATTGGCAAAATAAAGCAGCAGTGCAGTGACTTCATAATGACCCGAAACATTCAATGCCGTGAAATGATCGAAGATGTGCAGAAGAAGCTAGCAGGTTTCAGCTTCTCATCTTCTTCCAGCCAAGCAAGCATGCAGAGGAACACTTCTGTGCCACCAGATCAGAACAGTCCATCACCACCACCACCGTCGTCGCATGCTCCCCATGCTCAGGGCCCATATGGTGTTCCACCCGGAGGCGATTCAAGACCCGGGTACTCTCAGCCCGAGCAAAGACCTGCTTACTCACAGCCATACCCGCCCTATGGCACACCACCGCAACAGCCTCCATATGGTGCGCCGTCGCAACAGCCTCCTTATGGCGCGCCCCACCCTGGTCACTACCAACAGCCACCACACCAGCAACCTCCCAACCATGACTATGGCCAACAAGCATATCCTGGAGGATGGCGCGGGCAGTACTACAATCCACATCAGCCCCAGCCGCAGCCACAGCCGCCATATCCTCAGCCACCGTACAATGCCCAGGGTTCTTACCCTCCTCACCAGAGCAGCTACTACAGGCCTCAATGA</cdnaseq>

Protein Sequence

<aaseq>MSSAANVMLAIHEKRTTPTDLYRPLRLYIASAYSEREAAAADDDLAAVRDLRADVEQPSLPDPSSLERRRDALLAYARALSLVEPRFPISSDRAHVHSLAFTWHDAFKTGKKASVASIHLEKAAVLFNLAAVYSQIALAADRATDVGIRTACGSFQSAAGAFAWMRESGVAAKAVAAGATTVDVTPECAAMLEKLMLAQAQECFFEKVIAGGKPPALCSKVARQVGIFYEEAYAALSAAPLSQHFDKTWVSHVQLKAAQFYADACYRCSLDLHEKEEIAQEIARLKIGISALADAKKVARGVAAPLLDSVNKLESNMKTNLERAMKENDRVYLMRVPDASSLGALPAASLVKPTSLAEVLDASKERLFSSLVPDGSMKALSKYTEMVDNIIRTQAEKLQQASEITRVRLKEMDLPDSILSLEGNITLPLDLKEDVEAVQISGGPAGLEAELQQLRDLSRVNQELLVQTEEMLQKEANEDAQFRTQFGSRWTRPQSSTLTKNIQDRLNLFASNLKTAGDSDSQIERGLKESYPLMSILDRRPIESALPSISRPIMSLDGNEDAIVGALKQSLRQLESLGAQRAGLEDMLKEMKRKDDILPKLMAGVGSHDDLFKKEISKYDPVCAEIADNIVAQEQLLLQIQAQNEQFAAVFNLEDYKVARERCYKQIAAAVAKYRDIKKNINEGLNFYVTLQEAIGKIKQQCSDFIMTRNIQCREMIEDVQKKLAGFSFSSSSSQASMQRNTSVPPDQNSPSPPPPSSHAPHAQGPYGVPPGGDSRPGYSQPEQRPAYSQPYPPYGTPPQQPPYGAPSQQPPYGAPHPGHYQQPPHQQPPNHDYGQQAYPGGWRGQYYNPHQPQPQPQPPYPQPPYNAQGSYPPHQSSYYRPQ</aaseq>

Gene Sequence

<dnaseqindica>1..672#1252..2202#2368..2457#2548..2616#3389..3529#3807..3855#4308..4411#4537..5112#ATGTCGTCGGCGGCGAACGTGATGCTGGCGATCCACGAGAAGAGGACCACCCCCACCGACCTCTACCGCCCGCTCCGCCTCTACATCGCCTCCGCCTACTCGGAGCGGGAGGCGGCCGCGGCCGACGACGACCTCGCCGCGGTGCGCGACCTGCGCGCCGACGTCGAGCAGCCGTCGCTCCCGGACCCGTCCTCCCTCGAGCGAAGGCGGGACGCGCTCCTCGCCTACGCGCGCGCCCTGTCCCTCGTCGAGCCCCGCTTCCCCATCTCCTCCGACCGCGCCCACGTCCACTCCCTCGCCTTCACCTGGCACGACGCCTTCAAGACCGGCAAGAAGGCCAGCGTCGCCTCCATCCACCTCGAGAAGGCCGCCGTGCTCTTCAACCTCGCCGCCGTCTACTCCCAGATCGCGCTCGCCGCGGACCGGGCCACCGACGTCGGGATCAGGACCGCGTGCGGCTCGTTCCAGAGCGCGGCGGGGGCGTTCGCGTGGATGAGGGAGAGCGGCGTCGCCGCCAAGGCCGTCGCGGCCGGGGCCACCACCGTCGACGTCACCCCCGAGTGCGCCGCCATGCTGGAGAAGCTCATGCTCGCGCAGGCGCAGGAGTGCTTCTTCGAGAAGGTGATAGCCGGTGGGAAGCCGCCCGCGCTGTGCTCCAAGGTTGCCCGGCAGGTGAGCCTCTTCTTGCTCTGCCTCCTCTTGTTCAGGTTATTTCGATGATATGAGCTGATAATAATGTAGTGAGGGAGCTTATTTCGATTTATGTGGCTAGTATTTTGGAATGCTTTTTGTGGAGTCGTTTGATGGGGATACTGTCTGTAATTACCATCCACAGGTGACTTAACATAGCAACTTGTAGTTTTGGGAATTTGTCTAAATAAGTGCTCCTTTAGATGCTATCTTTAGTGTTGATAATAATAATTGGACTTTGCTATGGTGATTGGTGAACCATTGGGCATGAAGTCTGTCTTGATAGCATGATAAACTTGAGTTGTGGCATCATCCCATGGAGTGATCATATTTTAAATGAAACTGACTGGTTACAATATGATTGATTTGGTAGCATTCATGTGTCTCTCCTGGTGGTAAATAGAAGCTAGATTAGGTCTTGCAGTTTATTTGATTAAATAAAGTACAATTTGCAGGGTTTACTGCTTTTACAAACATTCAAGATACAAATATTTCTTCACCTTTTTGTAATATTGGTGTCAGATGTGCTATTGGATTGATTTGTGGATGTCCCTTTTTCAGGTGGGCATATTCTATGAAGAAGCCTATGCAGCTCTTAGCGCAGCTCCTCTCAGTCAGCACTTTGATAAGACATGGGTTTCTCATGTCCAGCTGAAGGCAGCTCAGTTCTATGCTGATGCTTGCTATAGGTGTTCTTTGGATCTTCACGAGAAAGAAGAAATTGCACAGGAAATTGCACGTCTGAAGATTGGAATTAGCGCTTTGGCAGATGCCAAGAAGGTGGCCAGGGGAGTTGCTGCCCCACTTCTTGATTCTGTTAATAAGCTGGAGAGTAATATGAAGACCAACTTGGAGAGGGCTATGAAAGAGAATGACCGTGTTTATCTGATGAGGGTTCCGGATGCTAGTTCTCTTGGCGCGCTCCCTGCAGCATCACTTGTAAAGCCTACATCTTTGGCTGAAGTTCTAGATGCTAGCAAAGAGAGGCTTTTTTCATCACTTGTGCCTGATGGAAGCATGAAAGCACTTTCCAAGTACACTGAGATGGTAGATAACATCATCAGGACTCAAGCGGAGAAATTACAGCAAGCTAGTGAGATCACTAGAGTTAGGTTGAAGGAAATGGACTTGCCCGATTCCATTCTTTCATTAGAAGGTAATATCACCTTACCTTTAGATTTGAAGGAAGACGTTGAGGCTGTTCAGATAAGCGGAGGCCCTGCTGGATTGGAAGCGGAGTTGCAGCAGCTTAGGGATTTAAGCAGAGTCAATCAGGAATTACTTGTTCAGACCGAAGAGATGCTGCAGAAGGAGGCGAATGAAGATGCTCAGTTTCGGACGCAATTCGGGAGTCGTTGGACTAGACCTCAATCTAGCACCCTAACAAAAAACATTCAAGACCGATTGAATCTGTTTGCTTCTAATCTTAAGACAGCTGGTGATAGTGATTCTCAGATTGAGCGAGGTTTGAAGGAGAGCTATCCATTGATGTCTATTCTTGACAGAAGACCGGTGAGAGTTAAAAATACATTATACTAGATAGTGTTCTTGTTTTTTTTTTCTTCAACTTGTCTTTCTTGATATGCTTCATTATGAATTTCAATGATGTTATTCAATCCTACACTCTTTTTTTTTTTTCATATTTGGTCTGTTACATATTGCTATTATATATTGCAGATAGAGTCTGCACTACCGAGTATTTCTAGGCCTATTATGTCCTTGGATGGGAATGAGGATGCTATTGTTGGAGCCCTTAAACAAAGCTTGGTAATCTACATTGTTTTTCTTAGCTGGCAAGTTTGATGTAAAGCTTCACTTGTTTTAAAACTTAAAAACCAATTTGATGTGCTTTTACAGAGGCAACTAGAATCTCTAGGAGCACAGAGAGCAGGTCTTGAAGACATGCTTAAAGAAATGAAGAGAAAGGTACTATCTTTTATTGCTTATTTTGATATTGTGTACATAAACTACTATAAGTCCCAGACATATGTTATGACAGATTAGGAATTTCTTTTGTTCAGTATTAGCTTGTTGATAATCATGTAGTTGACTTTTGTTTTATGTTTAAAAGCTCATGCAAATATTCTGATTCTTCTACATTTGGTCGTATGTGCATACTAGGGAAATATCCATGTTTTTACTTTTTTTTTAGAATGCAGGAGAGCTGCTTTATTTCATTAAGAAGGAAAAAAACCAGCCATGCAACCAAGGGCTCACAAGCCCTTCCACAAATAGCATCACTCTTTTTTTTTTTTTTTTACATTTGAACCTAGTCTTCTTGCGATCGCTTCATCCCCCCCCCCTCTCTCCTTTGTATGGACCTATCTCCTGAAGTGTTACTCATTATTTTTTACTGCATTTTACTGGCAATAAAATTAGTTTACAACCAGTTGCCCATTGATCTTCACTATGGATGGATCATGTTCATGCCTGATATGTGGTGTTCTTGGAGTCCTATGCTTGTACGTGTATGTGATAACCTGCTAGGAACCAATTAAAAGCTATACATGTGCTCTCCGTTTAACTTCCACTTGACAAGTTTTCAGGGAGGTCTTGCATTTTCTTTTCAAAGTTTGTTTGTCCTTGGCACCTTGTAACGGTCGAATTCAATATCTGTATTCATGACTGATAGTGACACATATAACCTGTGATGCCATCATGTTCATTTAGAATTATGACATACAAATATTTCTATCAGGATGACATACTCCCTAAATTGATGGCCGGTGTTGGATCACACGATGATCTTTTTAAGAAGGAGATTTCAAAGTATGATCCTGTCTGTGCTGAGATAGCTGATAACATTGTGGCGCAAGAACAACTGCTGCTACAAATACAGGTAAGCCACCATTCCTGATAAAGATTGATATAGTCCACCTTTGCAATTCTCTTATTCTAGAAGTTCAATGTAAACACCTTTCTGCTAAAATCTAGATAGACATCCCCCAAAAAATGTAATTATATTGAAATTTTTAAACGTCTAATAGCATCAATGGTTTAGTTGGTATTAGCAAAGAAAGAACAACCAGAAAATATTTTGAAGAGTTAACTATACTGTATTTCATGTTCTTTCGTCCTTATGTCTAACACTATTTATATTTTGGATTTCTGCACAGGCACAAAATGAACAGTTTGCTGCGGTGTTCAACCTAGAGGATTACAAAGGTATCCCTTCTGATTTATTCATCAATGGATTATATTGTGCGCTTAGTGACTTTGATAGCTGGATTTTTGCCCATTCTTAGGTAGCAACTAATGATTTGGATGTGGGATAATTATTTCTGTTACACTTACCAATAAGGTTGGGAACTTATATATACACATACCTAGTCATCAAATTGTCTGCTAGCTAAAACAACAGAATGCTGTGTTGTTTGTATGCATGTGTTTTTCTCTGTTAACCATTCAATTATGTTTCTTCGTTGAATACATTTTCTCCTCCTAGTTCTAGTTCAATTTAAGATATGAAGAACCATTGATGCTGGAACTTGGTCTCTTTAATTCTAATTTACAATTATTTTATCATGTAAATAGTACCACAATCAGTGTTTTTAAGTATGTATCCTGGTTTGTAAGCAATGAGCTGTGTAGGCCTGATTTGTGAAGCATGTTTTCAGTTGCTCGTGAGAGATGTTACAAGCAAATTGCTGCGGCTGTTGCTAAATACCGAGATATTAAGAAGAACATTAATGAAGGCCTCAATTTTTATGTGACATTGCAGGTAAATGCGCGTCTCTGTTGCATTCTGTTTCTACTGTAGTTAGGATATATATGATGACAGTTACCATTGTATGTAGGAGGACCACTGTATATGTATTTATATCCTGAAATGGTCCTTTTGTGCAGGAAGCAATTGGCAAAATAAAGCAGCAGTGCAGTGACTTCATAATGACCCGAAACATTCAATGCCGTGAAATGATCGAAGATGTGCAGAAGAAGCTAGCAGGTTTCAGCTTCTCATCTTCTTCCAGCCAAGCAAGCATGCAGAGGAACACTTCTGTGCCACCAGATCAGAACAGTCCATCACCACCACCACCGTCGTCGCATGCTCCCCATGCTCAGGGCCCATATGGTGTTCCACCCGGAGGCGATTCAAGACCCGGGTACTCTCAGCCCGAGCAAAGACCTGCTTACTCACAGCCATACCCGCCCTATGGCACACCACCGCAACAGCCTCCATATGGTGCGCCGTCGCAACAGCCTCCTTATGGCGCGCCCCACCCTGGTCACTACCAACAGCCACCACACCAGCAACCTCCCAACCATGACTATGGCCAACAAGCATATCCTGGAGGATGGCGCGGGCAGTACTACAATCCACATCAGCCCCAGCCGCAGCCACAGCCGCCATATCCTCAGCCACCGTACAATGCCCAGGGTTCTTACCCTCCTCACCAGAGCAGCTACTACAGGCCTCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031623