BGIOSGA031625

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Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031625| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031625, complete gene.| tag = OsI_341...")
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Gene Name

BGIOSGA031625

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031625, complete gene.

LocusTag

OsI_34168

Ensembl Transcript ID

BGIOSGA031625-TA

Ensembl Protein ID

BGIOSGA031625-PA

Length

4415

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17737781..17742195

Sequence Coding Region

17742077..17742195,17740892..17740943,17738369..17738638,17738116..17738283,17737781..17738041

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17737781..17742195 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17737781..17742195 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACTCATCGATGATCGCTCGCATCCTGGAGTGCTCGAACTTCTTCCCGGTGGTAGAGCACGGCTCAAACATACACATCGGCGAACAGGTCCAGCGCGAAGCACGTGCTCAAGCTCTACGAAAACGACAAATGGGCTGCCTGCCTATGCTGGACCTGGTGGATGGAACGCTAAAACCTGTCGGTGATCGATCCGAGCCGCGTCGTGTCGCCTTGCCTCGCCTCGCCTGGACTTCGACTTCGCCACCGTCGAGGGCACCGGAGATGGCCAACCACCGCCGCCAATGGGCGTCGTGGCAGACGTTCCACCCCGTCCACCCGATGGAGGATCTCATGCCCGGCGGCGTCCGCCTCCCCGACCCCGACGAGCAGCCACCGGACCCCATCTACGCCTTCCTCGAGGTGTTCGAGGAGCTCTACGGCGACCAGTTCCCTCCCCACGTTCTCCTCTACGACTCGGGGGATCCCAACGGCGGCGACGACATGGAGGAGTCTGATGACGACGTCGACGGCGGCGGCGAGAGTCTCTCCGCCATCGTCTATGGCGGGGGGAGACTGCACCCGTCCCGGCGCCCGTCCGTGCCGCCGCCGGGAGGAGAGGCCGAGGGGGGGTGGAGGGAGAAGGGCCGGCCGGACGCGTGGCAGCGGTTCTACCTCGACCGCGGCGCCGGCAGGCACGCGGCGTCGGAGGCGGAGGCCAACCGGGAGCTCTGGATCGCGTTCCTGCTCGACCGCGGCGCCGCGAAGAGCACCTCGTGGTGGAGGTCGTTCGAGCGGCGGTTCGAACGGTGCGCCGCCGCCGATCCCTACTACGCCGCCGGCGACACGCCCTGCGCCATGGTGACCTCTTTCACGTTCTGCTTCCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MHSSMIARILECSNFFPVVEHGSNIHIGEQVQREARAQALRKRQMGCLPMLDLVDGTLKPVGDRSEPRRVALPRLAWTSTSPPSRAPEMANHRRQWASWQTFHPVHPMEDLMPGGVRLPDPDEQPPDPIYAFLEVFEELYGDQFPPHVLLYDSGDPNGGDDMEESDDDVDGGGESLSAIVYGGGRLHPSRRPSVPPPGGEAEGGWREKGRPDAWQRFYLDRGAGRHAASEAEANRELWIAFLLDRGAAKSTSWWRSFERRFERCAAADPYYAAGDTPCAMVTSFTFCFQ</aaseq>

Gene Sequence

<dnaseqindica>1..119#1253..1304#3558..3827#3913..4080#4155..4415#ATGCACTCATCGATGATCGCTCGCATCCTGGAGTGCTCGAACTTCTTCCCGGTGGTAGAGCACGGCTCAAACATACACATCGGCGAACAGGTCCAGCGCGAAGCACGTGCTCAAGCTCTGTGAGTTCGATGGCAAAGAGGACACCTCACGTAGAGAACCCTGATGGGGCCAATGCGACATAGATGGTGTTGTCCGAAACGACGGCGGCCTGCCACCAGCCGCCTTTGCCCCTCCCTCACCAGCGATCGGGAACGGATGAGAGAGAGGGAAGATGAGAAGGGAATAGGAGATGGAAAGAGGGGAGGCTAAAGGAATAAGAAATAGACCTGACACGTGGGGCCCACTCACCACATCGGCTAAAATCAGGCTTTATACTGCTTGGAATATCGGGTACACCGGTTTTGCAAGTGGAGGGCCTCATTACATGTACAATTATTACGGTTTGAGGACGAAATTAGTTACTCCCTCCGTCCCATAATATAAAGGATTTTGACTTTTTACTTGCACTGTTTGACCACTCGTCTTATTCAAAAAATTTGTACAAATATAAAAAACGAAATATTGTGCTTAAAGTACTTTGGATAATAAAGTGAGTCACAAATAAAATAAATAATAATTCTAATTTTTTTTAATAAGATAAATGGTGAAACAGTATAAGTAAAAAGTTAAAATTGCTTATATTATGAGACAGGGAGTATTTCAACGTCAAGACGAGAGATCTAAAGTGAACTTATCCCTATATGTAATTAGTTGGACCTGTGTGGTAAAGGTCCAGCCCATTTAGCGCCTAGGGTTACCCTCTCCTCTCTACCTCGCAGTGGCCGCCGCCGCCGCAACGCATAATCCCTCTGTTCTTAAAAAAAAGACAAACACTGGATTTCCATGTCAAACGTTTGACTGTCCGTCTTATATAATTTTTTTTATAATTAGTATTTTCATTGTTATTAGATGATAAAACATGATTAATACTTTATGCATGACTTGTCTTTTAATTTTTTTTAAATAAGACGGACGGTCAAACGTTGGACATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTAACATTTCTCATATTCACATTGATATTATAAATCTAAACATATATATCTATCTAGATTCATTAACACTAATATAAATGTGGAAAATACTAGAATAACTTATATTATGAAAAGGAGGAAGTACTGATCATGATTGCGCTGTTATTTCAGTATGACATCTTGTGCAGACGAAAACGACAAATGGGCTGCCTGCCTATGCTGGACCTGGTGGATGGAACGGTAAGAATTTGAGATGAATGTGTTCTGCTCAACCACTTGAGAGCTTCGACCCGATCAACAGATGCTGTTGAACATCAATTGCAGATCCTGGCATGCTTGAAGTGGGCGATGGGGAGATGTCTTAATCGGAGTACCGCTCACAGTTCAGTATCTGTGGGCACTATCATAGGTACCATAGCATGTTTTGTGTACTAACAGTTTTGCTGCAATGTTGAATATTTTCTTTTGTTGCATTTCCTCACAGCAAGCTTTGCTTTAACTGTTCAGGCTCCTCTTTTGATTGGATGTGATGTGCGCTCAATGTGGCCCTGTTTAGTTTCCCAAAAACATCACATCGAATCTTTGGACACATGCATGAAGCATTAAATATAGATAAATGAAAAAACTAATTGCACAGTTAGAGAGGAAATCGCGAGACGAATCTTTTCAGCCTAATTAGTCCATGATTAGCCATAAGTGCTACAGTAATCCACATGTGCTAATGACGGATTAATTAGGCTCAAAAGATTCGTCTCGCGGTTTCCAGACGAGTTATGAAATTATTTTTTTCATTCGTGTCCGAAAAACCCTTCCGACATCCGGTCAAACATCCGATGTGACACCTAAAAATTTTCTTTTTGGAAACTAAACAGGCCCGAGCCAGCAGATGAAAGACATACTCAGCAACTGGGAGGTCATCGCTGTGAACCAAGGCAAGCCTTCTCTTTCACATGCTTAGATCTAGCCATATTCTTTGATATTTCACCATACTCATATAACAACTTTGTGCAGACAGACTAGGTGTCCAAGGGAAAGAAAATGCAAGCTGACAATGGATTGGAGGTAATCCCTGTTCATCTGCATCAGTGGTTTTCAAGTTTCAGCCTTGTCTTTGTTCCATGCTCTGAAGCTGGCAATACTGTGTTAATTTGTCGATAGGTTTGGGCCAGGTCACTCAGCAACAACAGGAAGGATGTGGTACTCTGGAACAGGCCATCACTGCGCATTGGTCGTGCATTGGACTCACTGGGTCAGTGGCTGTCACTGCTCGTGATCTATGGGCGGTAAACTTGCTTTCTTCAGAGCTCAAAGTACAACATCACTCTTCAGAATTCAGAGTTCATAACATTTCTCTCTTGCGATTTGCAAGGATTGGTAGAGATGGAAATGGATGCCATTTGGTTATATATATGCAGAAATAAGCTGTAAGCCTGTGCATTTAAGGTGCCGTCAAATGCGGTGTATTGCTGAAGTTTGTTGTGAAAGTTGCAGCAACAAAGCGGCATTCCTGCCACTATCTTATAAAGAAATATACTCGCCTGAAGACAAATCTGTGGCAAAAGCCTTCATAGTAGAGAGTTGAGACATTGCAAGACATCACAACTAGACAGAATGCAAAACACATTGTGGATCAAAACACTATCAGCTACAACTACGGATTGGGTTTGCACCAGCCAAATCACCTGCATCTGTTGCTTCAACAAAACAATTAATATCCACGAGGCTGCCGTCTCCGCCTCCCCGCCCACCGGCGTCGGAAGGATCCAGTCCGTTGGTCAGTACGGCCGTGATTCAAGGGGCCCATATCTGTCGGGCCGGAACGGGACTCTGACTTAGATGTGCCCATGTTATTTGGTCTGGAAGAGATTTTGATTTGGAATAAATCCACTTCGACTCCATTAGCCAGTGAGCGAATCTGATTGGAAAAAGTATACCCAAGGTCCCTCAACTTGTCATCGAATTGCAAAATCGTCCTCCAACCGTAAAACCGGATACAACGCGTCCCCCAACTTATGAAACCGGTGCAAATTAGACTCCTAGGCGGTTTTGACTCCGGTTTTATCCAGCGTGGCAGCTGACTTAGCATGGGACCCACGTGGGTCCCACATGCCAGCCCCTTCTTCCCCTCCCTCTCTTCCTCTCTCCTTCTTCCCCTCCCCATGCAGGGCAGCCGGCCGGTGGGGGAGCGCGGGAGACCGGCAACGGGCGATGGGCGACGAAGCGGCGGCAGCGCTGCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGCCGAGGGATCTAGTTTGTACTGGTTTTGTAAGTTAAGGAATGCGTTGTATCCGGTTTTGTGGTTGAGGGACGATTTTGTAACTCGATGAGAAGTTGAGGGACCTTCGGTGTACTTTTTCCAATTTTTCACAATATTATCCTAGCGTGGGCCGTGGGCGTGTGGCCCATCACTGGGCCTTTTCCAAACCGACTTTTGGCAGCTAAAACCTGTCGGTGATCGATCCGAGCCGCGTCGTGTCGCCTTGCCTCGCCTCGCCTGGACTTCGACTTCGCCACCGTCGAGGGCACCGGAGATGGCCAACCACCGCCGCCAATGGGCGTCGTGGCAGACGTTCCACCCCGTCCACCCGATGGAGGATCTCATGCCCGGCGGCGTCCGCCTCCCCGACCCCGACGAGCAGCCACCGGACCCCATCTACGCCTTCCTCGAGGTGTTCGAGGAGCTCTACGGCGACCAGTTCCCTCCCCACGTACGCCGTCCGCCGATCAAAACTCGATCGATCGATTGATTTTGGCCTTTGATTTGCTCATCTGCTTCAATTCCACACCCTGCAGGTTCTCCTCTACGACTCGGGGGATCCCAACGGCGGCGACGACATGGAGGAGTCTGATGACGACGTCGACGGCGGCGGCGAGAGTCTCTCCGCCATCGTCTATGGCGGGGGGAGACTGCACCCGTCCCGGCGCCCGTCCGTGCCGCCGCCGGGAGGAGAGGCCGAGGGGGTGGATGCCGTGCCCGGTTCTTCCTCGGGCGGGAGGCGGCCATGGCGATGCCGACGCCGCGGCCGCCGAACAAGGGGTGGAGGGAGAAGGGCCGGCCGGACGCGTGGCAGCGGTTCTACCTCGACCGCGGCGCCGGCAGGCACGCGGCGTCGGAGGCGGAGGCCAACCGGGAGCTCTGGATCGCGTTCCTGCTCGACCGCGGCGCCGCGAAGAGCACCTCGTGGTGGAGGTCGTTCGAGCGGCGGTTCGAACGGTGCGCCGCCGCCGATCCCTACTACGCCGCCGGCGACACGCCCTGCGCCATGGTGACCTCTTTCACGTTCTGCTTCCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031625