BGIOSGA031628

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Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031628| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031628, complete gene.| tag = OS10G04...")
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Gene Name

BGIOSGA031628

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031628, complete gene.

LocusTag

OS10G0494800

Ensembl Transcript ID

BGIOSGA031628-TA

Ensembl Protein ID

BGIOSGA031628-PA

Length

6892

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17688631..17695522

Sequence Coding Region

17695495..17695522,17693408..17693538,17693137..17693254,17692782..17693008,17692532..17692634
,17692252..17692322,17691586..17691609,17691378..17691452,17691144..17691287
,17690950..17691073,17689895..17690833,17689757..17689818,17689532..17689657
,17689376..17689450,17689180..17689295,17688994..17689110,17688817..17688885
,17688631..17688709

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17688631..17695522 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17688631..17695522 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCAAGCGCGCGTACAAGCTCCAGGAGTTTGTCGCGCATGCTTCCGATGTCAACTGTGTCAAGTTTGGGAGGAAGACATCAAGAATCCTCATCACTGGTGGGGAGGACCAAAAGGTCAATCTTTGGGCCATAGGGAAACCCAGTTCCATCTTGAGCCTGTCAGGCCTTACGAGTCCAGTTGAGTCAGTGAGCTTTGACTCATCTGAAGCTATGATAGGTGCTGGAGCATCAAGTGGGACAATAAAGATATGGGATGTAGATGAAGCAAAAGTCGTTCGTACTTTTACTGGACATAGATCGAGTTGTGCGTCCCTTGATTTCCATCCTTTTGGAGAATTCTTCGCTTCTGGGTCTTCAGACACTAACATGAAAATATGGGATATGCGGAAAAAGGGATGCATTCACACATATAAAGGTCACACACGGCGGATTGATGTGCTTAGATTCACTCCTGATGGCCGGTGGATTGTCTCTGGTGGATCTGATAACTCTGTAAAGATCTGGGATTTGACAGCTGGAAAGCTCTTGCATGACTTTAGGAATCATGAAGGCCCAATTAACTGCTTAGATTTTCACCCCCATGAGTTCTTATTGGCTACAGGTTCAGCTGATAAGACAGTTAAGTTTTGGGACCTTGAAACTTTTGAGTTGATTGGTTCTTCTGGACCTGAGAATAGCCGGGAATACTTTGTGCCAGCTAGTGTAGTTCGGTCTATGACATTCAACAAAGATGGTAAATCACTTTTTTGCGGATTACATGAAAGTTTGAAGGTTCTTTCCTGGGAACCCATCATATGCCATGATGTGGTTGATGTTGGCTGGTCCACATTAGGGGATCTAATTGTTCATGAGGGAAAACTTCTTGGTTGCTCATATAACCAAAGTTGTGCTGGAATATGGGTCGTGGACTTGATGAAAATTGAACCGTATGCTGTTAGCATTGCTGAAGCACATTTGAATGAAAGCGTAAATAGGTCAATACAGGCTGATAATAGCATATCATCAGTGTTGGGAAGGTTATCAGTTTCCAGAAGCCCAGCCAAGGAAGCATCTTCCGATACTTTGCTTAAACTCTCAATGTCTGCTTCAAAAGAAGTTCCTGTTCCAGCTTCTTCTGCAGTGACAAAGAAACTACCAAAAGAACCTATAACAAGCAATATTCGGCTCACAAGATCTGATTCTCTACCAGTTGTTTCTCCTAGGGTTAGATTGAACCCAAAGTTCTCTGATGACCAGAAGAGGCAGACAGATTATGCTGTGCCTATAACAACTCCAAGAATTCGCTCCAAAGTGGATCTCTCTATAGGTGCTAGAGCATTCCATCGTAACTCAGTACCATCGGTTGCTCCCACAAATAGATCCAGGTCCAAAATATCTGCATATAGTAGTGAAGGATCGTCGTTCATCCCTGTTGTTGTCCCTAGGCATATCCCTAAAGTGGATTCTGGTCCCAATCTCAGTAAAGTTCTCACTACTGATTTAACAATTGTCGAGCCTCAAGACATAGAACGAGGTGGTCTGGCTGTGGATTGTGGAGAAGATGATAAATTGGTGTGTGTGATTGATTCAAGGAGCTCAAATATGGGTGTACAAAATGGCCGTAGAAGAAAAGCCGGTGATATTATTACACATAAAGAAACCCCAGAGACTGCTTTGACAGTTAATATGGATCGTGACTTCAGAAGAAAGGCTCCTGAAACTGAAAGTATGCAACAGGACATATTTCATTCAGAGCCCATTAGTTCAAAATGTAAATATATTAAAGAAACTTCAGGTGCTGGAGACATTAACTTGTCTGGGTCAGCCATTACTGAAAGTGTCAAGTCTAATGAAGGTGGTGACTGGTATAATGCATCTTCTTTTGTAAAACCAAATTTGACTGTTGGAAGGAATCCAGAGACTTCATACATCAACAGAAGAACAATGTTTGGATTGAGACATTCAACGGATTCAAGTGAAAAACACGCTGTTGAACATGGGCCTTCCAATTTGTCTGCAAGTTATGAGAGAAATCAGTATGCACCAACACTACATAACTTGAGGAGGCGCTCTTCGGTTGCTAGAGAACAGAGTGCATCAGCTGGTGATGAGGATGATATTGCTGATCTGATGGAAAACCATCAAGAATTCATTCATGCAGTGAAGTCTCGGCTAACAAAACTAGAGGTGGTTTACAGGTGTTGGCACAATAACGATGTAAAGGGATCTATTGATGCTACACGCAGGATTCAGGATCTTGATGTTACCGCCGATATAATTAGTGTTCTGATGGAGAATGATAATTCTATCACACTAGATATTTGTACTTGTGTCTTACCTCTTGCCTCCAGTGTTCTTGAAAAAAGCAGCTATGACAGGCACCTGAAAGTTGCCTTGGAGATGATCCTTAAGCTTGTGAAAAGCTTTGGTTCTACAATATCTTCAGCTGTGTCATCTACTCCACCAGTTGGTGTAGACATTGAGGCAGAACAGAGGCTCAATCGGTGCAATTTGTGCTTTCAAGAGCTGATAAAAGTTCACAGCGTTCTCTTTGCCCTGACACGGCGGCAAGGCGAGGTTGGAAGATCTGCACAGGAGCTAAGCCTCTTTCTTCAGGATATCTTTCAGCTGACAAGCAGATAG</cdnaseq>

Protein Sequence

<aaseq>MATKRAYKLQEFVAHASDVNCVKFGRKTSRILITGGEDQKVNLWAIGKPSSILSLSGLTSPVESVSFDSSEAMIGAGASSGTIKIWDVDEAKVVRTFTGHRSSCASLDFHPFGEFFASGSSDTNMKIWDMRKKGCIHTYKGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTAGKLLHDFRNHEGPINCLDFHPHEFLLATGSADKTVKFWDLETFELIGSSGPENSREYFVPASVVRSMTFNKDGKSLFCGLHESLKVLSWEPIICHDVVDVGWSTLGDLIVHEGKLLGCSYNQSCAGIWVVDLMKIEPYAVSIAEAHLNESVNRSIQADNSISSVLGRLSVSRSPAKEASSDTLLKLSMSASKEVPVPASSAVTKKLPKEPITSNIRLTRSDSLPVVSPRVRLNPKFSDDQKRQTDYAVPITTPRIRSKVDLSIGARAFHRNSVPSVAPTNRSRSKISAYSSEGSSFIPVVVPRHIPKVDSGPNLSKVLTTDLTIVEPQDIERGGLAVDCGEDDKLVCVIDSRSSNMGVQNGRRRKAGDIITHKETPETALTVNMDRDFRRKAPETESMQQDIFHSEPISSKCKYIKETSGAGDINLSGSAITESVKSNEGGDWYNASSFVKPNLTVGRNPETSYINRRTMFGLRHSTDSSEKHAVEHGPSNLSASYERNQYAPTLHNLRRRSSVAREQSASAGDEDDIADLMENHQEFIHAVKSRLTKLEVVYRCWHNNDVKGSIDATRRIQDLDVTADIISVLMENDNSITLDICTCVLPLASSVLEKSSYDRHLKVALEMILKLVKSFGSTISSAVSSTPPVGVDIEAEQRLNRCNLCFQELIKVHSVLFALTRRQGEVGRSAQELSLFLQDIFQLTSR</aaseq>

Gene Sequence

<dnaseqindica>1..28#1985..2115#2269..2386#2515..2741#2889..2991#3201..3271#3914..3937#4071..4145#4236..4379#4450..4573#4690..5628#5705..5766#5866..5991#6073..6147#6228..6343#6413..6529#6638..6706#6814..6892#ATGGCCACCAAGCGCGCGTACAAGCTCCGTATCCTCGATTCTTCTTGCCGCTTGAATCCTCGGTTTGGGAGTTTTAGATTAAATTTGAGTTCTTTTTTTGGGTCGAGTTGTTCTTGCCCTGCCTGCTTATCGTTGTATGTAATCTAGGTTTCTGATCGAGTTGGGGGGAGTCCGCGTGTGGTGATCGGTTTCGATCTGCGCTCATGTTATTTTCTTTGTGCTGTTCTTGGTTTGATGATTGGGTTTATCGCGGTACGCTGCTGGGATTGATTTGGTACGAATTCCAATGAGATGAGACGATTTGAGACCATGTGAACTCTACTGTTCAGCTCTAGCAGATCTTCCTTTTGTATGCGTGTGCAAGTATTATGTAGTTCTCTGCTTAAAGCCAGACTAAATTTTGCTGTTTTTTTTTTGCCGGAATGACCGAAGGAGGTCATTCAATGTAATTAAGACGGAAGAAAAGATTACAAGAAAAGTTTTACATCGACAGTTGGCTGTCGAGAAAGGATGTGCACCAGAGCACACGCCCCGAACCATGTGCCAACCGCCTAAACACACGCTACAGAGAGGGAAGTCCGTTACCCAATCCGAATCCACCATCTGAACATCGGCGGCACATGGCTTCCGCCACACCCGAACTGACGCCCCTCCGTCGGCCGACTTCATCGAACCACCATCCCTGAGAGCTGACCCAGGACCCCTCCGTTCAACCACCCACCGGCCTCCTTGCCAGATCTGGCCGAAGGAGAACCTGGGACTAGGTGGCATTGCTTCAGCAGCCTGAGCTTCCCCCACTGACAAGCTGCCGCCTCAATCCAGCTTAGAAACTCCCCACAAAGAAGGGGAGGAGCTCTAGGAAGGGCGAGGGTGCCGATCGACAACGAGGAAAACGACCAACCGCCGCCAACTCCCTTTGCACTGCCATCTGGGCCTGCACCAATGCCAGAAACGCTGCCGCTCCGGCTCCGGTGCCACCCGCCGGCGCCCCCTTTGTCCGGCCTCCTTGCCCCACCTAGCCGCGCCGCGCCGCTACTGGCCGCTAAGGGCACCGCGGCAGCCCAGCTGCCCGACCGTCGAGGCCTAGCCACGCCATAGGGCCCGGCGGCAGCGAAGGCAGAGGCGGGGGCGGGGGAGGCGGCAGGGTGCTGACCAGCACCAGCACCGCCGCCAGCATGGGGCGGGCCACGCCCCCGAGTTGCCGCCGCCGCCGCTCCCAACCGCCGCCGCCGCCGCCGCACGGTTCGGCCGCACGCCGCCGCCATGCACCTCGACGGCATCCGCCTCCGCGTCCAGGCCGGCACCGCCGCCACGCAACCGGAGCCGCCACCGCCGCTGAGCTGCCACCGTCGCCGAGCCGCGACAGTGCCGCCGAGCCGCCACCGCCGCCCCTAGCCGCCTCGCGCCGAGATTCAGGCGAGGATGGCCGGATCCAGACTTGGGACTCCGGATCCGCCGCCTCCCCGCACCGCCCCAACGTCGACGTCGCCAACTCCGACCGCGGTGGGGGTCTTCGTTTGTTTTAGTTCGAGAGAATAAAGACTATTATTACTGAAGTTTTATTTCAAAAATAAATATTAGTTAGAGCATTGAGTTGTCATCTTACAAAAATTGACTCCTGTATTATCTTCTGCTTGGATAGTTTCTGCTGCAAATAGGATCACACTAGGGTCAGATGCTGACACTTACCATGAGAAAAAATTGGATGGATGAATTAATCAATACAAAATCTTCAAATATTTATTATGTGTAGCTCTTTTCTTTAAGAATTTAGATGGTGAGATATCATGGATAATACATTCACTGAAATGAACATGGTTTAACCCGAAAAGCATTGTTATGTCAGTAAATTGCGTTACCTTGTTGAAATGTATATTTTGAAATACCCTTCCAAAAAAGTGATTTTCTGAAGCAACACTGAAAATTGCCCAAATGCCAAATGGTAATCTACAACAGCCAACCATGTTTCCTTGACAATGGCCAGAGGAGTTTGTCGCGCATGCTTCCGATGTCAACTGTGTCAAGTTTGGGAGGAAGACATCAAGAATCCTCATCACTGGTGGGGAGGACCAAAAGGTCAATCTTTGGGCCATAGGGAAACCCAGTTCCATCTTGGTAATATTCCACTGGCCTCTGAAAGGTCAATCGTTCATGTGTAATACTTCTTTTTTTTCTTCCTTGTCTTTGTTACTCAGTTTTATGGGGTCTTTATTAGTCAGTTTGAAAGTTACATCTCTTCTTACAAGTTAATGTCACTATGAATTGCAGAGCCTGTCAGGCCTTACGAGTCCAGTTGAGTCAGTGAGCTTTGACTCATCTGAAGCTATGATAGGTGCTGGAGCATCAAGTGGGACAATAAAGATATGGGATGTAGATGAAGCAAAAGGTACGAACTAATATGGATAACAATTTGCTGCATTATTCATTTAAAGAAACACTTCGCTGCATTTAAACCGAAGTATAAACTGTAGTTGTATCACACAACTATAACTTTGTTAATTTTTTTTTGCTCAGTCGTTCGTACTTTTACTGGACATAGATCGAGTTGTGCGTCCCTTGATTTCCATCCTTTTGGAGAATTCTTCGCTTCTGGGTCTTCAGACACTAACATGAAAATATGGGATATGCGGAAAAAGGGATGCATTCACACATATAAAGGTCACACACGGCGGATTGATGTGCTTAGATTCACTCCTGATGGCCGGTGGATTGTCTCTGGTGGATCTGATAACTCTGTAAAGGTACAATTCTGAATATGTCTATTAATACAAGGCAAACACAATCACAGCACTGGAAAAGAAATAACATGCTATGCTGATTATTCGAACCATTAAGCTGTCATATGTATCTCTCGGGTCACTGAAATTGTTTTCTGATCATCTTGCTAGATCTGGGATTTGACAGCTGGAAAGCTCTTGCATGACTTTAGGAATCATGAAGGCCCAATTAACTGCTTAGATTTTCACCCCCATGAGTTCTTATTGGCTACAGGTTAGATAGATGATCCTTTATTATAACACTTGTAGTAGATGCATTCACTGTTGTGTACTAGCTGGCAGTTTGATGACATGTTTTCCTCCAAAATTATGCTATTATGAATATTATTATTTCTGGCATGGATCATTGTTGACTGATGCTTATTTGTGTCATCTAGACTTGACAGCCTATACATTGCTTTCTTGTTTCAAAAATATTTGCAGGTTCAGCTGATAAGACAGTTAAGTTTTGGGACCTTGAAACTTTTGAGTTGATTGGTTCTTCTGGACCTGAGGTATTGAATATATTAATTGTTGTATATCTTAAAGCAATTCAAGTTAATGTTCAGAGTTTGAGCCAATTTAGATCTATAAATACCATCGCTATGTAGCGCTCTGTCATACTATCTCCTATATATGAGGGTCTCATGTAAGTGTTAGATACATGTCATCATGTTCTTGGCTTCAAAGAGATTCAATTAAAACCAAGTTCCAGTAATCTATTTAAGTTTATGGTAATTCTGCCTAAACCTGGTCCTTTAAAAGGGGATAAAAGAACACAGCAAGTCAACATTAAGCAGTACTTCTGTGCATATTTGGAGTCACTAAATGGTAAGATATCAATCTGACCAGTGATTCAGGCATCCAGCATGTCAAACCAAATGATATAATCATACCTGAAATTCTCTCTCTGCAAATAGCTTTCAAGAGCTTATATAATTTAATATTCATTTATGCAAAACGATATGTCAGTTCAAGTTTTTACCCACGTTCCTTAATTTGTACCTTTGGACCCTAATGTTTTGTCAGTTAGATAATACATACCCATCCTTAAAGAAAAGATTGATTGTACCTTGAGCTATACCATGAGTTATTTCAATCTCCGCTCCTTATCTTCTTGTTTCGTGGATGTAACTAATATATTCTGTTTCTTGCAGAATAGCCGGGAATACTTTGTGCCAGTACGTTGATCCTTAATCCATTCTATCTATATTTTTCTACTCAAATGGATGGCAGTGCTTTCTGTCTACAAAGTTCTCGACGTAAATGAAATAATCAATACTTATCTTATCTGCATGTACTCTTAATTTTCAGGCTAGTGTAGTTCGGTCTATGACATTCAACAAAGATGGTAAATCACTTTTTTGCGGATTACATGAAAGTTTGAAGGTAACTGCTCTGTTGGACTGTCGATATCCTCTGAAGCTTTGGAAAATGACCTCACAACAGATTTTATTTATTTATTTTTTTTACCTGTAGGTTCTTTCCTGGGAACCCATCATATGCCATGATGTGGTTGATGTTGGCTGGTCCACATTAGGGGATCTAATTGTTCATGAGGGAAAACTTCTTGGTTGCTCATATAACCAAAGTTGTGCTGGAATATGGGTCGTGGACTTGATGGTATGGTTCTACACTATTTACTTTGTTACCAATTGGGCAGTTCTGATATGTTACTTATCCCAAATTTCAGAAAATTGAACCGTATGCTGTTAGCATTGCTGAAGCACATTTGAATGAAAGCGTAAATAGGTCAATACAGGCTGATAATAGCATATCATCAGTGTTGGGAAGGTTATCAGTTTCCAGAAGCCCAGGTAAACAATTATCATTTGGCGTATAACATCAATATAATTTTTCTTCATCCATTATCCTTGAGTTATGATTCTTCACCCTAAAACTATGTATATTTTGCTATTTCTCGAAACCGCAGCCAAGGAAGCATCTTCCGATACTTTGCTTAAACTCTCAATGTCTGCTTCAAAAGAAGTTCCTGTTCCAGCTTCTTCTGCAGTGACAAAGAAACTACCAAAAGAACCTATAACAAGCAATATTCGGCTCACAAGATCTGATTCTCTACCAGTTGTTTCTCCTAGGGTTAGATTGAACCCAAAGTTCTCTGATGACCAGAAGAGGCAGACAGATTATGCTGTGCCTATAACAACTCCAAGAATTCGCTCCAAAGTGGATCTCTCTATAGGTGCTAGAGCATTCCATCGTAACTCAGTACCATCGGTTGCTCCCACAAATAGATCCAGGTCCAAAATATCTGCATATAGTAGTGAAGGATCGTCGTTCATCCCTGTTGTTGTCCCTAGGCATATCCCTAAAGTGGATTCTGGTCCCAATCTCAGTAAAGTTCTCACTACTGATTTAACAATTGTCGAGCCTCAAGACATAGAACGAGGTGGTCTGGCTGTGGATTGTGGAGAAGATGATAAATTGGTGTGTGTGATTGATTCAAGGAGCTCAAATATGGGTGTACAAAATGGCCGTAGAAGAAAAGCCGGTGATATTATTACACATAAAGAAACCCCAGAGACTGCTTTGACAGTTAATATGGATCGTGACTTCAGAAGAAAGGCTCCTGAAACTGAAAGTATGCAACAGGACATATTTCATTCAGAGCCCATTAGTTCAAAATGTAAATATATTAAAGAAACTTCAGGTGCTGGAGACATTAACTTGTCTGGGTCAGCCATTACTGAAAGTGTCAAGTCTAATGAAGGTGGTGACTGGTATAATGCATCTTCTTTTGTAAAACCAAATTTGACTGTTGGAAGGAATCCAGAGACTTCATACATCAACAGAAGAACAATGTTTGGATTGAGACATTCAACGGATTCAAGTGAAAAACACGCTGTTGAACATGGTAAGTGTTCAAACCGATATGTTATTATTTCTCTTTGTTTCCCTTCAACTTACCTTGCTCTTTGTTGGGAGGACAGGGCCTTCCAATTTGTCTGCAAGTTATGAGAGAAATCAGTATGCACCAACACTACATAACTTGGTATGCATACTCCAAATTTCCAGATTATGTCATTCACGATGTATTTATTCTTATGTTGGTACCAAATCCATGTTATGCCCTACCTTATTGTTTCTGCAGAGGAGGCGCTCTTCGGTTGCTAGAGAACAGAGTGCATCAGCTGGTGATGAGGATGATATTGCTGATCTGATGGAAAACCATCAAGAATTCATTCATGCAGTGAAGTCTCGGCTAACAAAACTAGAGGTTATAACGAGTATGGTCATCTATAGCATCTGCTATTTTGAGATACCTCGAGTAACGGTAATCTCAATGTGTTATGTGTAGGTGGTTTACAGGTGTTGGCACAATAACGATGTAAAGGGATCTATTGATGCTACACGCAGGATTCAGGATCTTGATGTGTGTACTTCTTAATTACCATCCTGTTCTGTTGAAGTTCCATCCATTATAATGTCTGATGAGTTCTACCACTTTTACAGGTTACCGCCGATATAATTAGTGTTCTGATGGAGAATGATAATTCTATCACACTAGATATTTGTACTTGTGTCTTACCTCTTGCCTCCAGTGTTCTTGAAAAAAGCAGCTATGACAGGTACTTTTCCTTGAATATATTCTTGTAGCATTTCTCTTAGTAAGTATGCATTGACATCTCCTATTGCAGGCACCTGAAAGTTGCCTTGGAGATGATCCTTAAGCTTGTGAAAAGCTTTGGTTCTACAATATCTTCAGCTGTGTCATCTACTCCACCAGTTGGTGTAGACATTGAGGCAGAACAGAGGTAACCTTTCTTGCCTCTCATTTTCATTGCATCTAAATACATTGCTGAGGCTTCATGTACATTACAATGGTTCAATTCACACATGTGAATTTGTTGCTACTTTGCTAGGCTCAATCGGTGCAATTTGTGCTTTCAAGAGCTGATAAAAGTTCACAGCGTTCTCTTTGCCCTGACACGGTAAATTCTTGGTTTAGCTTCAAAAAGGCATTGCTTTGAGATTCTGAAAGTCTCATTGGCGATTCAAAGAACTAAAAATCGATTCATTTGTGCATCCTGTTCTATAGGCGGCAAGGCGAGGTTGGAAGATCTGCACAGGAGCTAAGCCTCTTTCTTCAGGATATCTTTCAGCTGACAAGCAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031628