BGIOSGA031634

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Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031634| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031634, complete gene.| tag = OsI_341...")
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Gene Name

BGIOSGA031634

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031634, complete gene.

LocusTag

OsI_34144

Ensembl Transcript ID

BGIOSGA031634-TA

Ensembl Protein ID

BGIOSGA031634-PA

Length

5025

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17570843..17575867

Sequence Coding Region

17575605..17575867,17575382..17575510,17575000..17575059,17574751..17574874,17574573..17574617
,17574392..17574490,17572984..17573076,17572605..17572671,17572317..17572381
,17571980..17572053,17571735..17571859,17571550..17571650,17570843..17570944

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17570843..17575867 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17570843..17575867 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCTCGCTTGCCTCCGCGAAGCCCTCGCCTCGCGCCGCCGCCGCCGCCGCGGCGGCGGCGGCGGCATCGTCGTCGCTGCTGTCGCTGCGGGGGAGGAGGAGGAGGGTGGGGGTGGTGTGCGCGGCGGTGTCGTCGGGGGAGGAGGTGTTCGGGGGGAGGAGGGAGCTGGCGGGGGTGCAGCCGATGGTGGAGGCGCTGCCGCCGGTGGAGAGGGCGGTGGTGGAGCTGGCGGTGGTGGCCGCGGCGGCGGCGGCAGGCGTCTCGGGCTCCGCGGCGGTGAACTCCGCCGTGCCCGGGGTCGCCGCGGCGGGGCTGCACAACTACGTCGCCGGCTCCGACGACCCCACCAAGCTGGAGAGCAGCGAGGTGGAGGCCATCGCGAGCAAATACGGCGTTAGCACAGAGGATGCAACCTTCAAGGCCGAGCTCTGTGATTTGTATGGCAGGTTTGTTTTCTCATTAATTCATCCAGGATATGAAGACCTTGAAGGTACTGAAGTTGAGACTATTATAAAGTTTAAAAAGGCCCTTGGGTTGAATGATATAGATGCTGCAAATGTGCACATGGAGATTGCTAAACGCATTGATCGCAATGCTGGTGTAGGACAACAGCAGGCATTTGAAAAGCTTATATTTGTAACAAATCTTGTGTTTCGGGATGCATATGAATACCTACTTCCATGGAAACGTCTTTTCGGGGTTCATGAATCTCAGGGGTGTGTTCATGTGATGGCAGGAACTTCATCTGACTATAACGCCTCTTTGTCAATTTTGTCGGTGCGAGATAGAAGTTTGACTAAGACTTTGATAGACGATGTTATGAGGGAAAGTGCCAAGAGTTTATATGCATCATTGCTCAAGTCTATTGGGAGAGGTCTTGACATAGGCACATTAATTGAAGTAAGGAGATCACAACTAGCATATAAACTTTCTGATGAGATTGCTGCTGAGATGTTCAGGGAGCATGCAAAGAAGTTAGTTGAAGAAAACATTTCAACAGCCTTGAACAACTTGAATAACCGAACACAGGTTGTTGAAGAAGTGAAAAGCATCCTTTCATTTAATGGTATGCTTACAGTACTGAGCAATTTCCCGGGAGAAGAAAGATTTGTCCGCGGGCTTGGGCCTATTACATTAGGTGGAGACAGTGATCATGAAAAGAGGGTAGAGGATCTAAAGATGCTCTATAGTGCCTATGCAATGGAGGTACTTTCAGATGGACATCTTAACGATGACAAGCTTGCGGCTTTGAATCAACTGAGGAATATATTTGGACTGGCGAAGTACGAAGCAGAAGCAATCATCACAGATGTCAAGGCTCGAGTATTTCAGACCTACTAA</cdnaseq>

Protein Sequence

<aaseq>MELSLASAKPSPRAAAAAAAAAAASSSLLSLRGRRRRVGVVCAAVSSGEEVFGGRRELAGVQPMVEALPPVERAVVELAVVAAAAAAGVSGSAAVNSAVPGVAAAGLHNYVAGSDDPTKLESSEVEAIASKYGVSTEDATFKAELCDLYGRFVFSLIHPGYEDLEGTEVETIIKFKKALGLNDIDAANVHMEIAKRIDRNAGVGQQQAFEKLIFVTNLVFRDAYEYLLPWKRLFGVHESQGCVHVMAGTSSDYNASLSILSVRDRSLTKTLIDDVMRESAKSLYASLLKSIGRGLDIGTLIEVRRSQLAYKLSDEIAAEMFREHAKKLVEENISTALNNLNNRTQVVEEVKSILSFNGMLTVLSNFPGEERFVRGLGPITLGGDSDHEKRVEDLKMLYSAYAMEVLSDGHLNDDKLAALNQLRNIFGLAKYEAEAIITDVKARVFQTY</aaseq>

Gene Sequence

<dnaseqindica>1..263#358..486#809..868#994..1117#1251..1295#1378..1476#2792..2884#3197..3263#3487..3551#3815..3888#4009..4133#4218..4318#4924..5025#ATGGAGCTCTCGCTTGCCTCCGCGAAGCCCTCGCCTCGCGCCGCCGCCGCCGCCGCGGCGGCGGCGGCGGCATCGTCGTCGCTGCTGTCGCTGCGGGGGAGGAGGAGGAGGGTGGGGGTGGTGTGCGCGGCGGTGTCGTCGGGGGAGGAGGTGTTCGGGGGGAGGAGGGAGCTGGCGGGGGTGCAGCCGATGGTGGAGGCGCTGCCGCCGGTGGAGAGGGCGGTGGTGGAGCTGGCGGTGGTGGCCGCGGCGGCGGCGGCAGGGTACGTGGTCGGGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGCTCGTCGGCGCTCGGGGCGGTCAGCGTCTCGGGCTCCGCGGCGGTGAACTCCGCCGTGCCCGGGGTCGCCGCGGCGGGGCTGCACAACTACGTCGCCGGCTCCGACGACCCCACCAAGCTGGAGAGCAGCGAGGTGGAGGCCATCGCGAGCAAGTGAGTGTTGGATTTGCAGATTGCTCGTCTATACTTGCTGCATTTGGTTGTGTGATTTTTTATTTTTACTCGTTTACTTCTGAAACTCCCATTTGCTGTTAGAATGCTAGTAAAATTTTGTTCTAGCTTGTTTATGCAAATTGAACAACCTATAATTATCAGGAGGAGGAGGATTTTTTTTTTTTTACTAATGCGAGCTAAAAATTCTGTTTATAAAATGAGATGCATATTGCCATACCTATAAAATTAAAATTAGAATTCATATATTGAATGTGTCTCTCTTACTCCGTCAAATGATCCTTTTACTATCAATTATTTTTAGATACGGCGTTAGCACAGAGGATGCAACCTTCAAGGCCGAGCTCTGTGATTTGTATGGCAGGTATGTATGTTTCCTTCTAGAAATCAATCTTAAACATGTCCTGTTTTTAGTTCAGATCCTATTTTTTTTGGTCTTGTAGTATATAAGCATTTGCTCATCTTGTTCTCATGTCCATTTTATTCCAGGTTTGTTTTCTCATTAATTCATCCAGGATATGAAGACCTTGAAGGTACTGAAGTTGAGACTATTATAAAGTTTAAAAAGGCCCTTGGGTTGAATGATATAGATGCTGCAAATGTGCACATGGAGGTAGTGCCCCAAGATCTAGGCCCTTTTATTTCTAACTGTCTGCCTCAGATATTTCTTCTACTTTAGTCTTCATTTTCACATTTCCACAGTTTTCCCTTCCTCCTCACTTCTTTCATTGCGCTTGTTGTAATAGATTGCTAAACGCATTGATCGCAATGCTGGTGTAGGACAACAGCAGGTACGTGGTTGTGCTGTGATATATACATGGGTACTTTGAATTTTCTATTGATCCGATGATAACCATTTTAAATATTTGGCAGGCATTTGAAAAGCTTATATTTGTAACAAATCTTGTGTTTCGGGATGCATATGAATACCTACTTCCATGGAAACGTCTTTTCGGGGTTCATGAATCTCAGGTACTTAATTAAAATAATCATCATTCGTTTAAACCGTGCATATCATCTCTTTGTTTCATGATCTCGTCATATGGAGAAAGCAGGGGATCATTAGAGAATTTTAATCATCTATGCTGGTATTTGAAGTCTAGTTGCACAAATTCTCTGACATTGTTACCACTGCAATTCTTAAAGGCCTCTAGCATGTTGAGTAATCTCTTTGCATAATGTTGTACTATTGTGCTGTTCTCAGTGTAATGGTTGTTGGGTTATGGCTTTGGCCGAAAGCCTACACTGTCAAGGTCAGCATCAGGTCACATGTATTGGCAAATAATATTCTCCACTTAATCCCAAAAAATGCAACTTAGAGCATTGCTCTTGCCACTGTAACATTATTAGCAATTAAATGCAAATTTTATAACAATATGGAAGTCTGAATTATGACAATTACTCCAATATTATTTTCTTGTGGTTAGTTTCAATATCTACAATTTGTAAAGTTATCAGCTATAACTATGAAAAAAAAATACATGGCCCACTGTGGCATGCTGGATATGGTGCATGTAATATTATGTGATACAACTTTTATCCCCACCCCCCCCCCCCCCCACCCCAAAAAAAAATAATAAAATAATGCTCAACATTTTGCATGCTGCATAGAACCAAAAAAGAAAGGATGTGCATGCGATAAATTTGAAAGTTATTTATAATTTGTCCTGGCTTGGTCAAGGTGCAAAATTTTGAATTGCATGGGCACAAAATGATTTTCGAGTTTTATACTGGAGATGTACTTGAAAGGGGAGACCTCTCTTGGGGGAAAACTTTGTTCTTGCCACTAGAAAAGTATGCTGTTTTTTGCCATCAAAATTACACCATTTCATTTTTGCTTTCCAAAATTTTGCGCTTATCTAATTTTTTCCATCATCATCAAACCCTGCTAGTTGACCATTACTACTGTAGTACTATGGCGTTTGACTTTCACATATTTTCTTACTAAGACCAAAATGCCTCTATCAAATTGTGTGCCCAATTTGTCAGCCTTTACCTCTATTTTGATGCCCTTTCTCACCATTTCTCTCGAAGGGTTGGAACTTTCAGTAAAAAAATTCAGAGTGCACCAAAATAACCAAAACTACAGACTTCTAAAAGCTTAGGTGCTTTTATCTACAAATTTACAAATAATTTATTTTTTATCAAGATTTTAGACGAATTGAATTATTGAATGATTTTCATCAATTTGAATGAGTCAGTATTTTTTAGTGTGACAATTTCAACAAATTAAAATTTGGTATTGTTTTTTGAAATATTAAATGAATAACACCAAATTTGGATGAAGGGGTGTGTTCATGTGATGGCAGGAACTTCATCTGACTATAACGCCTCTTTGTCAATTTTGTCGGTGCGAGATAGAAGTTTGACTAAGACTTTGGTTAGCTGTATTGGCAAAACAATACACACAAAGATGGTGCAGACGAAATAAGGAATTAATTTTGTGTCAAATACAAAAACCGGTGCTTGCTTATTACTGGCATTAATTAGTAGCCTATGCAAACTTTGTAGTGGCATGAACAAAATTTCCTTATCAGCAATGAGTATGCAGATTGCCTGCAAGCTGTACAAAATGCGCATTCACATATTTCTCATGTGCTTTTGTTCATATTTTAGTGCATAGCTTCTTTTGGGTTTATATCTTGTTTGATGATAAGATTTTATTTAGTTACATTATTGTTGTTTTCGGCAGATAGACGATGTTATGAGGGAAAGTGCCAAGAGTTTATATGCATCATTGCTCAAGTCTATTGGGAGAGGTACTGAGACACTTATATTTCTCTTTTTAAGGCATTAGTTCCATCCATAACTGTCATTATGTATACTAGATTCACTGTTACAGAGTATTTATGTCTGAACAGAGACTTGGAGCAGTGCAGAACTGCAGATAGCAATGTTATCTCCTGCTTGTATAATTATACTTGATAGACTATTTACTGCATTTCTACAGAAATCTCAACTCAACATATTCTGTTTCTCTAGGTCTTGACATAGGCACATTAATTGAAGTAAGGAGATCACAACTAGCATATAAACTTTCTGATGAGGTAACACTTTTCCTCTGAAAATTTTACTGCTTATTTGCTTTTCCCCATTTTTTCGTTCATTTTGATAAATACTTGGGAAAATACCACTTATATCTAAGTGTGCACGCTTGCCAAGATGTCAGACTCTGGCGTTTGGACAACAAAAAAGTTTTCTATATTTGATTATTCACATAAATCTTAAATATGATATGTAAGATGAATGGAATTCATATAGGCATACTACGTTGTTAAGCGGCATATTCTATTATTTAAATTTATTGCAGATTGCTGCTGAGATGTTCAGGGAGCATGCAAAGAAGTTAGTTGAAGAAAACATTTCAACAGCCTTGAACAACTTGTAAGTCGCGTACCAAAGCAACGTATGAAATGCACTTTTGGACAACTTGTCCATGTGAATATAGATTCACTACATTTCATAACATGAATGGATTTGGCTTCATAAACCATATCTTTACAGGAATAACCGAACACAGGTTGTTGAAGAAGTGAAAAGCATCCTTTCATTTAATGGTATGCTTACAGTACTGAGCAATTTCCCGGGAGAAGAAAGATTTGTCCGCGGGCTTGGGCCTATTACATTAGGTAGAGTGGTAAAGTATTTCGAAATTCATGTGTTAATGAGGTGGCCCTTTTCTAATGCTGGCTCCTGTGCTTTGCTTTGCACAGGTGGAGACAGTGATCATGAAAAGAGGGTAGAGGATCTAAAGATGCTCTATAGTGCCTATGCAATGGAGGTACTTTCAGATGGACATCTTAACGATGACAAGGTGATTTCATGTATAATACCATCTTTTCAGTTTACTGGTGCTGCTTATGAGATGCCAAGCTGAAATGAGGCTGCCGGATGGCAAATTCAATTAACCATCTGCGTTGAAACATAACATTGCAATTTCACCGACCCTTAAAACATAGCAGCAGTTGAGACAGTCTGGCCTTCGCAATTGTGAATTATGTCAAGCATTAGTTCAGTGGCTTGAATCTACTAGCACATGGATACTAGTCTGGTCTTAACTTGGTTCAGCTCAGATCTACATTATTTGTTGAAAATCGGTGATCAGTATCTAGATGGAGATTCTCATGATAGAGCCCAGATCATTTTACTGGTCCAGCTTTGTGAGAATGCCAAAGACAGAGTTCAATACACTTTACCCAGTTGATTGTGAAATAACAAGTACTGTAAACACTTGTAAATAATGCAGTCAATCCGGACCAAGATTGCTTGAGCACATACCATCAACATTTTGTTTTTTCTGTTGATCTGCTTATACTTAGGTGCATGCATGCTTTATGACAGCTGCGTCTAACAATTTGTTCTACCTTGGTAGCATGATATCATATTAACCGAATCCTTTACATGATTATGGTAATGCAGCTTGCGGCTTTGAATCAACTGAGGAATATATTTGGACTGGCGAAGTACGAAGCAGAAGCAATCATCACAGATGTCAAGGCTCGAGTATTTCAGACCTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031634