Os10g0572300

From RiceWiki
Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0572300| Description = Leucine-rich repeat, typical subtype containing protein| Version = NM_001071994.2 GI:297610976 GeneID:4349464| Lengt...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0572300

Description

Leucine-rich repeat, typical subtype containing protein

Version

NM_001071994.2 GI:297610976 GeneID:4349464

Length

2539 bp

Definition

Oryza sativa Japonica Group Os10g0572300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23146522..23149060

Sequence Coding Region

23146562..23146697,23147679..23148592,23148681..23148821

Expression

GEO Profiles:Os10g0572300

Genome Context

<gbrowseImage1> name=NC_008403:23146522..23149060 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23146522..23149060 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctgaggaagaaggaggcggcggttgcggccgcggccgccgtcgcggagatggagcgcggaagcaagggtctcgctgccctgggcttggagtccaagcccatctcctcgctacgccgtgatgtctctgcaggtactgacatggaaaaattgagccttatccaagtggcaagcctgatagagtcatcagcaaagaaagggatcacagaactcagcctccgggggaaactggtcgaccagatcgagtggctccctgtttcactcggcaaattgcaagatgttaccgagcttgatctttccgagaataggatcatggcactcccatcaacaattggcagccttagatatttgacaaagcttgacctacactcaaatcagctgatcaatctgcccgacgcgtttggggaactctccaacctaattgatcttgacctgcatgccaaccagcttaagtctcttccttcatcatttggaaatctcacgagcctagcaaaccttgacctgagctcaaatatgttgaaggctcttccagattgtttaggaaaattggcaaacttgagaagattaattgttgagacaaatgagcttgaggagctaccctatactattggatcttgcacatctcttgtggagcttaggttggatttcaatcagttaaaagcccttccagaggccattgggaagttggagaagctggaaatactgacattgcactataacagaatcaaaggattgcctacaacagtgggttcactttccagattgagagagctggatgtcagttttaatgaggttgaagtaatccctgagaacatttgctttgcgacaagtcttgtgaagttgaatctcagcaggaattttgcagacttaagagcactgccgaaatcaataggaaatcttgagatgctagaggagctggacataagcagtaaccagatacgggtactgccagattcgttcaggtgtctttcgaggctacgtgtatttcatgctgatgagactccacttgaatttccaccaagagaagttgtaaagttaggggctcaggctgtggtcaagtatatgaatgatttgaatgctgcaagaggaacaaaccagaagaaaacagatcggggaagcttctggacctggctcttctcgctgtttggttgttgcaaaaagaaccaagaagtgggattgccagtataa</cdnaseq>

Protein Sequence

<aaseq>MELRKKEAAVAAAAAVAEMERGSKGLAALGLESKPISSLRRDVS AGTDMEKLSLIQVASLIESSAKKGITELSLRGKLVDQIEWLPVSLGKLQDVTELDLSE NRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELSNLIDLDLHANQLKSLPSSFGN LTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVELRLDFN QLKALPEAIGKLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICFA TSLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFRCLSRLRVFHADE TPLEFPPREVVKLGAQAVVKYMNDLNAARGTNQKKTDRGSFWTWLFSLFGCCKKNQEV GLPV</aaseq>

Gene Sequence

<dnaseqindica>41..176#1158..2071#2160..2300#tggatacgttggtgttggtgcggacagcgtggacctggagatggagctgaggaagaaggaggcggcggttgcggccgcggccgccgtcgcggagatggagcgcggaagcaagggtctcgctgccctgggcttggagtccaagcccatctcctcgctacgccgtgatgtctctgcaggtaatttgctttcaagtacagtattattttgtcggaatcacgaaatcctaaaaatctttgtactactatatatccatgtgtgatggtttcgatgctgccgtgttctatggacccgacataattttgcagtatctgtttttttttccggttaaatttcactaccttgcacgaattggatgctcatgtcatgcatatgggcgtaatatttccattacgatgtggttgctaccttttatatagaaagaatcactagaaataattgtcaactgacgtaatggcgtactgatttgttagtgttgctttgattttcttcaactagttgccatttaattgcacactgtttataaattgcctattcttgtttcactagtactataattggaaacatagaggagcggtctcgtagtttgtgatgattctgtatttctgcttgttggtttagcaaattacacgattgatgtctacaaggtaccagtgtaccgcaactgatttttcacctttcgctatgagttagcgtttgatgtgaacaaccacctctgcagccaattgtcacatcacatccatttcttcaaaggaatttcgtgctattttgtgatttcttttttcttgacataatgcattagtcgtttgttggtcccagctttaatttttaattttcttgcggtagttggaggaccattcccttgttggtcactgctggacctggtgtatcatttgtctcttgtgcctggtgatctgatattgttaattcatttgttaccagttaggcaatagcataattatttgtctgaatacgatatgaatcatgagcaattagtcattttgctttgttgactttggaggtgctatctaatgtaggccttaatcatgcttaggcaagtagtgatcatcaaatttgtaacggtaccataaatgtgatcagcatttttgagatgtcagtacttgtgttatcctaagttccacttgtcaatatccctgcaggtactgacatggaaaaattgagccttatccaagtggcaagcctgatagagtcatcagcaaagaaagggatcacagaactcagcctccgggggaaactggtcgaccagatcgagtggctccctgtttcactcggcaaattgcaagatgttaccgagcttgatctttccgagaataggatcatggcactcccatcaacaattggcagccttagatatttgacaaagcttgacctacactcaaatcagctgatcaatctgcccgacgcgtttggggaactctccaacctaattgatcttgacctgcatgccaaccagcttaagtctcttccttcatcatttggaaatctcacgagcctagcaaaccttgacctgagctcaaatatgttgaaggctcttccagattgtttaggaaaattggcaaacttgagaagattaattgttgagacaaatgagcttgaggagctaccctatactattggatcttgcacatctcttgtggagcttaggttggatttcaatcagttaaaagcccttccagaggccattgggaagttggagaagctggaaatactgacattgcactataacagaatcaaaggattgcctacaacagtgggttcactttccagattgagagagctggatgtcagttttaatgaggttgaagtaatccctgagaacatttgctttgcgacaagtcttgtgaagttgaatctcagcaggaattttgcagacttaagagcactgccgaaatcaataggaaatcttgagatgctagaggagctggacataagcagtaaccagatacgggtactgccagattcgttcaggtgtctttcgaggctacgtgtatttcatgctgatgagactccacttgaatttccaccaagagaagttgtaaagttaggggctcaggtacacattatactgccgttctgccatatttgcttacttagtccttcgctttctttaaatgattaacaatgtttcttctgcatgccaggctgtggtcaagtatatgaatgatttgaatgctgcaagaggaacaaaccagaagaaaacagatcggggaagcttctggacctggctcttctcgctgtttggttgttgcaaaaagaaccaagaagtgggattgccagtataactgaagcatttcatcatctgtatgtatgttgtgaattactcaggtctgcaaagaaaggaaacgtggataatttggttcctcttgttttttttgtcccttttttttggtgtgtatatatgtaattttgtcatgtaaggtccatttctagttatgcaagacctattaagattcatttctgtgtgtaacttcatttgtatgatagcatgttactgcttccatattaaaaactgtcttacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0572300, RefSeq:Os10g0572300