Os10g0572500

From RiceWiki
Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0572500| Description = The stop codon is not identified.| Version = NM_001071996.1 GI:115483587 GeneID:4349466| Length = 4728 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0572500

Description

The stop codon is not identified.

Version

NM_001071996.1 GI:115483587 GeneID:4349466

Length

4728 bp

Definition

Oryza sativa Japonica Group Os10g0572500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23157659..23162386

Sequence Coding Region

23157659..23158471,23158908..23158993,23159719..23160828,23161507..23161581,23162052..23162126

Expression

GEO Profiles:Os10g0572500

Genome Context

<gbrowseImage1> name=NC_008403:23157659..23162386 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23157659..23162386 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggcgccgcaggagcgcaccgtcagggatctctacgatcgcacgcgacacaaggatctcgcgctccccgaggaatcagtggaggggcgtggcagtggacgacgggtggaggggccggggcatcgggaagtggtcgccaagatggaggacaagcttacagcaagaaaaagaccagtaccactcgacagtcctaatgtgaagacagaatctggcacttgtaatgtctgttgtgctccttgctcctcgtgcctacaccgaaatattgcactcacggattcaaatatggactgtggatcatctcaaacatgctttgcaaggtcagaaacaaaaaacagttcgtttgttcgtgttgataaagggctccgtaccaaggctaaggggggagaaaatgacgatgaattcagtgctacttcaagccctgcttcctattctgaaaatggtgaaaataaagtcatcgcaagatcatctgttgcagcagattccgaggttgacaagccagcaaaacgtagaaggctagtaaatcacggttctagatcacctatagtagaatgccatgatgatagcaactcatgtgttactggagtatcagcagcaagcaagcttctgttagacaagaaaaaggataaactatctacatcagcatcaagtcgtgaccttactgttaactataaggacaatggcattaacagactaagaaactactgcgccgaagaatctacaggaaagaagagatctgatgttcatgccatgcaccgaagttcatctgatagatcattgcctgccgagtctccttttgcaaccaagaggttgctgcgtacccaatcctctctcagtgcatcacatggattatctcctaagagaccaacacatgaatttgggaatgcacaaaataatttagctcaccaaccttgtgagaaagcttcttcaaacaagaccgtagagcgttcactgggaggaaaatcagatccttctgtgcttggtggtgagaggcacagcatgatgactagttgtggtaccagtaatagggataaaatcaaggctggatctttaacaaagaatctggaaaatggcacctcatgctcaagaaatggaagtctagaacatgctgacatccaatctaatgatgctgtcaataggaatgacaatgataaacaagaacgtaatcaaggttgttcaatggatacaggtagtggtagaaagttgaatacacagaatgatgtgatgacggactctgggaattcagagggcttaatagatgttaatgtttgtgatatatgtggagatgttggaagggaatatcttctggctacatgcactaggtgccttgaaggggcagagcatacttattgcatgcgagtgaagttagagaaagttccagatggtgaatggttatgcgaagaatgctgtcttaaagaagatgaaaaccaaacaagaagcaacggtggcacatcaaggaataaggttttggacgggaagaaccaaaattcagaaagtacaaacaactctaagacattgaaggttgttgtgactgatttggacagtcaacaaatcacttgtggcactccagtaaatgatcccttggctggtagcaatcaaaagttgcatcttgcgtcatctgatctggaagcacggcaagtgaagtgtgccaccccaactgctgaaagactggatgtgaagaacaaaaattcaggaattatgggaaatcgcaagaagttgcaagttgttacatctagcttggaagcacgacaatcctcttgtaggacaccaacgtctggaagcttggataagaagaatcaaagcttagacaagaggagtcaaagttcagaagtgttgttaaaacgtaagaagttgcgagttgccactgatatggaatcacctctatcaaatgatggtgtacggagtccacctaaatcatgcaagagatatgcagaaaatactttatcctctactcccaggctcctgaaggcggacagccctaggaatcatgatgtgttctccagggagaactcatttaaaagctctaacaaaggaagtataaagtcgcctgataatgctccaatgaggtctcaagcagttaatagttccgtgaccttacctcggtcatattccttggggaacttggcaaatgttaaaacaccaggtccttcaccacgagg</cdnaseq>

Protein Sequence

<aaseq>MRAPQERTVRDLYDRTRHKDLALPEESVEGRGSGRRVEGPGHRE VVAKMEDKLTARKRPVPLDSPNVKTESGTCNVCCAPCSSCLHRNIALTDSNMDCGSSQ TCFARSETKNSSFVRVDKGLRTKAKGGENDDEFSATSSPASYSENGENKVIARSSVAA DSEVDKPAKRRRLVNHGSRSPIVECHDDSNSCVTGVSAASKLLLDKKKDKLSTSASSR DLTVNYKDNGINRLRNYCAEESTGKKRSDVHAMHRSSSDRSLPAESPFATKRLLRTQS SLSASHGLSPKRPTHEFGNAQNNLAHQPCEKASSNKTVERSLGGKSDPSVLGGERHSM MTSCGTSNRDKIKAGSLTKNLENGTSCSRNGSLEHADIQSNDAVNRNDNDKQERNQGC SMDTGSGRKLNTQNDVMTDSGNSEGLIDVNVCDICGDVGREYLLATCTRCLEGAEHTY CMRVKLEKVPDGEWLCEECCLKEDENQTRSNGGTSRNKVLDGKNQNSESTNNSKTLKV VVTDLDSQQITCGTPVNDPLAGSNQKLHLASSDLEARQVKCATPTAERLDVKNKNSGI MGNRKKLQVVTSSLEARQSSCRTPTSGSLDKKNQSLDKRSQSSEVLLKRKKLRVATDM ESPLSNDGVRSPPKSCKRYAENTLSSTPRLLKADSPRNHDVFSRENSFKSSNKGSIKS PDNAPMRSQAVNSSVTLPRSYSLGNLANVKTPGPSPRG</aaseq>

Gene Sequence

<dnaseqindica>3916..4728#3394..3479#1559..2668#806..880#261..335#tacctctcgggctctgctcttctcgtcttcctcttcctctccgctacgcagccgcggcgcaagtgcttcctctccacgccatcaccgacccaccaccgcgcgcatccgttcccgtccctatccgccgccggagccctagatagataccgcgtcgcggccatgctggaggagccgctcgccgccgtgctccgcggagacgggaggtaataagggaggggagggggaggggttcccgatcggcggggagctggggtgggggcatgagggcgccgcaggagcgcaccgtcagggatctctacgatcgcacgcgacacaaggatctcgcgctccccgaggtacgtcacgctcacgcgcgcaccaacccctcctccctctactgttgattcattcattcgttcatgggttgattgatgatacctcctccggttcgctggtgttgttgctggtgatgtgggtttcgtcttcccttacccgcggattagggattagggattggggattgggattggtgggggtaggctaggctatgccgattcgaggtttcgttgcgcgtgtaccgtacgaattgtttgtttggccgattagttttttttttttttcatcagggaggcgttggacgcggttttgcgataggtcaatcagaaattgatcgaatcctttgatttcatgcctcctgctatttgttttcgcatccaattaggagccaatcgcagggatttggtgggggtgtcgatgcgattttgcggctggagtttttcgagggttgcctgattgacgcgcgccttcttctgtttgtgccgttcaggaatcagtggaggggcgtggcagtggacgacgggtggaggggccggggcatcgggaagtggtcgccaagatggaggtgagcatttccagggtgtggttttctctgtatatgctgacaatattctgctgggctcagaattttgcgcctgtttgcctcatcatctcatgcccacatgagagaaaaatacgatttcaatctagattattcgtctattctaatgcgctcttggactgcatgcagtttagctgttgtgttgtggtatagatgcttggaggtgattctgatcccacaatgctgtctacaataagggtatattaatatgtcagtagtgcaactcctgcttttggcatgacttattctcgcttggaaaatggcttggcagtacttgaatgctttggcgatctttctttccttggtggattgatgtgacgctttattcatctttacttacttgatgaatgactctgatcatggttttgtgtgctgtaagagagcactggcaattatctttccttgttgtctttataacagtccattttctcgttaagtgcttgtggattgtcattcgtcgatttactttaatagctctgagtagtctaattctccaggattagcaatgtttctgataaatagtttaatcttttcattgaaaatccataaaatacctgaggtctcattgtatgcttgttatgtttatgcagttctggcagggattttttttttgattgtttatgtttcttttttttttcctaggacaagcttacagcaagaaaaagaccagtaccactcgacagtcctaatgtgaagacagaatctggcacttgtaatgtctgttgtgctccttgctcctcgtgcctacaccgaaatattgcactcacggattcaaatatggactgtggatcatctcaaacatgctttgcaaggtcagaaacaaaaaacagttcgtttgttcgtgttgataaagggctccgtaccaaggctaaggggggagaaaatgacgatgaattcagtgctacttcaagccctgcttcctattctgaaaatggtgaaaataaagtcatcgcaagatcatctgttgcagcagattccgaggttgacaagccagcaaaacgtagaaggctagtaaatcacggttctagatcacctatagtagaatgccatgatgatagcaactcatgtgttactggagtatcagcagcaagcaagcttctgttagacaagaaaaaggataaactatctacatcagcatcaagtcgtgaccttactgttaactataaggacaatggcattaacagactaagaaactactgcgccgaagaatctacaggaaagaagagatctgatgttcatgccatgcaccgaagttcatctgatagatcattgcctgccgagtctccttttgcaaccaagaggttgctgcgtacccaatcctctctcagtgcatcacatggattatctcctaagagaccaacacatgaatttgggaatgcacaaaataatttagctcaccaaccttgtgagaaagcttcttcaaacaagaccgtagagcgttcactgggaggaaaatcagatccttctgtgcttggtggtgagaggcacagcatgatgactagttgtggtaccagtaatagggataaaatcaaggctggatctttaacaaagaatctggaaaatggcacctcatgctcaagaaatggaagtctagaacatgctgacatccaatctaatgatgctgtcaataggaatgacaatgataaacaagaacgtaatcaaggttgttcaatggatacaggtagtggtagaaagttgaatacacagaatgatgtgatgacggactctgggaattcagagggcttaatagatgtaagtagtttcctgatccattctgttcattcgtgagtatactgtatactccttcaaaatgtagttcttttatactgtgtttctatgcaaaacaacgttagtttacactaggtttgatatctgtccatacaaaaaaagaattttgggtcacacttggggttgattgattgaaagtgtaacatgtaactgggatttggttggtcttggacacattttcttatcatgacacttaacatggagaggaactgtgcatatcatttgcccttttagagtatgagatgttccttatttcatttgcttcttggctggttatgccactttttcatgtgaaagatagcttgaactggtgaagtttaatgatgaagctttcacttaaaatagtcttccgtgcaatacctgaaataactaattactagcacctagcacatcccactgggtagaaaaagttcgtacatgaaggctaattcctgttcttttattgatcgaaatatggtggtaggaaattggtgttttgtttcttcactacatacaaatgttcttgtgctttcctgcatataccatcatctgattaaaatcaagactaattaaaagtttgctgcatatctgaacatatttggataataggatttatttggctctttgatttacaatgcttccctcaatctgtacagtgatgtttccattgtttcatattatttacctgtctcttttgtgttgtaccccaggttaatgtttgtgatatatgtggagatgttggaagggaatatcttctggctacatgcactaggtgccttgaaggggcagagcatacgtaagttactaaccattttctttgtattactttctaagaaatatgatgtattattatatttaacagctatttcttcacactggaacatcatgcacatattaaactagtttaccaaggatggatattattcacaccaccactcttttaagtcttgtctggcaatgacgcttgtagcctataaatgatcgaatctaggtgtatttgtatcaaatgatctattagggtgcaattctcatgatgcgttaaactaatgcttttaagctgaatgcaagtcctttccatggttttgtttgatattaatttcactggagtatataataaagaggaaaagcaagttatttgggctagcatgctggtttcattcctttgtgttttgtgcggaaaatgtatatgctgcaatatgctagcttttgaatttctgtttattgttgactagttattgcatgcgagtgaagttagagaaagttccagatggtgaatggttatgcgaagaatgctgtcttaaagaagatgaaaaccaaacaagaagcaacggtggcacatcaaggaataaggttttggacgggaagaaccaaaattcagaaagtacaaacaactctaagacattgaaggttgttgtgactgatttggacagtcaacaaatcacttgtggcactccagtaaatgatcccttggctggtagcaatcaaaagttgcatcttgcgtcatctgatctggaagcacggcaagtgaagtgtgccaccccaactgctgaaagactggatgtgaagaacaaaaattcaggaattatgggaaatcgcaagaagttgcaagttgttacatctagcttggaagcacgacaatcctcttgtaggacaccaacgtctggaagcttggataagaagaatcaaagcttagacaagaggagtcaaagttcagaagtgttgttaaaacgtaagaagttgcgagttgccactgatatggaatcacctctatcaaatgatggtgtacggagtccacctaaatcatgcaagagatatgcagaaaatactttatcctctactcccaggctcctgaaggcggacagccctaggaatcatgatgtgttctccagggagaactcatttaaaagctctaacaaaggaagtataaagtcgcctgataatgctccaatgaggtctcaagcagttaatagttccgtgaccttacctcggtcatattccttggggaacttggcaaatgttaaaacaccaggtccttcaccacgagg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0572500, RefSeq:Os10g0572500