BGIOSGA031671

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Revision as of 04:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031671| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031671, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA031671

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031671, complete gene.

LocusTag

OSJNBA0012L23.48

Ensembl Transcript ID

BGIOSGA031671-TA

Ensembl Protein ID

BGIOSGA031671-PA

Length

4449

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17112166..17116614

Sequence Coding Region

17115430..17116614,17113614..17113669,17113151..17113387,17112772..17113060,17112484..17112680
,17112166..17112319

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17112166..17116614 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17112166..17116614 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGAAGAGACCCTCGTGGCCATGCCGCTCGCGCCGCCGCATCACCACCACCACCACGCCCACCTCCCCGCGCTCCCGCACCTCGCCGCGCCGCCCCCGCCGCCACCGCCGCCCGCAGAGACCGAACTCACGGAACAGCGAGAAGAGGAGGTCCCGGTGGACGACGTCGTCGAGGCGTCGGCGGACGTGCCAAGGAGGGAGGAGGGCCTTGTCGTCGATGGGGGTGAGGACGTGTACTACGCGAGGAGGATGCTGCAGGGGGTGGTGCTCCGGCCGCCGCCGCACCTGCCGCAGCCGGAGGCACCGCCGGGGCTGACCAGGGCGCTCTCCGCGCCGGCGCCCGACGGGTACGTCGAGGAGGAGGAAGAGCAGAGGCCCGTCGAGAGGTCCGCCTCCGTGAACTCCGCGGCGTCCGCCGTCGTCGTGGACGTGGCCTCCATCGGGCGGTTCTTCCGCGACCGCCGCGACGTGCTCTCGTCGGCCATCACCCGGCGAATCTCCTCGCTGAAGGAGGCCTCCTCCTCCCCTCCTCCTCCGGTGGGGATGGACACCTACGGCGTGCAGGAGATCCACCTTCCCAACGTGAAGGTCACCGTCCGCCTCAAGGACGCCATCGAAGCCGACGCGGAGGAGGACGATGCTGTGGGCGGCGGCGGCGACGACGGCTACTCGTTCTCGGGCAGCCACATCAAGGGCCGTGTCAGCTTCTTCTCCCGCTCGGGCTGCCGCGACTGCGCCGCCGTGCGCGCCTTCTTCCGCCAGTCCGCCCTCCCCTACGTCGAGATCAACCTCGACGTCTTCCCGGAGCGCGAGGCCGAGTTCGCCTCCCGCGCGGGCGCCTCCGCGCGCGTGCCCCAGATCTTCCTCAACGAGAAGCTCCTCGGCGGCCTCGTCGTCCTCAACTCCCTGCGCAACAGCGGCGAGTTCGAGCGGCGCGTGCGTGACCTCGCCGGGAGACGGTGCCCCGACACCGCGCCGCGGGTGCCCGTGTACGGGTTCGACAACGATCCCGGCAAGGAGGGCGGCGACAGGGAGGACGCCATGGTGGGCATCGTGAGGGTGCTCCGGCACAGGCTCCCGATACAGGACCGGATCGTGAGGCTCAAGCTCGTCAAGAACTGCTTCTCCGGCGCCGACATGGTCGACGGCATCGTGAACCATTTGGAATGCAGCAGGAAGAAGGCTGTGGAGATCGGAAGAGAACTGGCAAGGAAGCACTTCATCCACCATGTCTTCAGAGAGAACGACTTCGAGGATGGCAGCCAGAACCTGTACCGGTTCTTGGAGCACGACCCTGCCATCCCAAAGTACTACAACTTCATCAGGGGAGCCACCAACGACGGCGAGCCGAAGCTGGCCGCCGCCATCGGGCAGAGGATGACCAAGATCATGGTTGCCATCCTGGAGGCCTACGCCTCCGACGATCGCCGCCACCTCGACTACAGCCGCATCGCCGCCAGCGAGGAGTTCAGAAGATACGCGAACATGGTGCAGGAACTCCAGAGGGTGGACATGTCGGCGCTCCCGGCCGAGGAGAGGCTACCGTTCTTCCTGAACCTGCACAACGCGATGGCCATCCACGCCGTCGTCAGGGTCGGCCAGCCGGGGGCCATCGACCGGCGGTCCTCCTTCTCCAACTTCCAGTACGTCGTCGGCGGGCACCCGTACTCGCTGGCGACGATCAGGAACGGCATCCTCCGGTCCAACCGCCGGCAGCCGTACACCATCGCCAAGCCGTTCGGCTCGTCCGACAAGAGGCTCGAGTTGGTGCAGGGGAAGGTGAACCCGCTGGTCCATTTCGGCCTCTGTGACGCCACGAGGTCGAGCCCGATCGTGCGCTTCTTCTCCACGCAGGGGGTGGAGCCGGAGCTCCGGCACGCGGCGAGGGAGTTCTTCCTCAACGGCGGCGTGGAAATCGACCTCGAGAGCCGGACGGTTCACCTCACCAGGATCATCAAATGGTACAGTGTTGATTTCGGGCAGGACAGGGAAACCCTCAAGTGGATCCTGAACTATTTGGACCCGACCAAAGCTGGGCTCTTGACACACCTCCTCAACGACGGTGGGGCGATCAACATCTCATATCTGAACTATGATTGGTCCTTGAATGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MGEETLVAMPLAPPHHHHHHAHLPALPHLAAPPPPPPPPAETELTEQREEEVPVDDVVEASADVPRREEGLVVDGGEDVYYARRMLQGVVLRPPPHLPQPEAPPGLTRALSAPAPDGYVEEEEEQRPVERSASVNSAASAVVVDVASIGRFFRDRRDVLSSAITRRISSLKEASSSPPPPVGMDTYGVQEIHLPNVKVTVRLKDAIEADAEEDDAVGGGGDDGYSFSGSHIKGRVSFFSRSGCRDCAAVRAFFRQSALPYVEINLDVFPEREAEFASRAGASARVPQIFLNEKLLGGLVVLNSLRNSGEFERRVRDLAGRRCPDTAPRVPVYGFDNDPGKEGGDREDAMVGIVRVLRHRLPIQDRIVRLKLVKNCFSGADMVDGIVNHLECSRKKAVEIGRELARKHFIHHVFRENDFEDGSQNLYRFLEHDPAIPKYYNFIRGATNDGEPKLAAAIGQRMTKIMVAILEAYASDDRRHLDYSRIAASEEFRRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAVVRVGQPGAIDRRSSFSNFQYVVGGHPYSLATIRNGILRSNRRQPYTIAKPFGSSDKRLELVQGKVNPLVHFGLCDATRSSPIVRFFSTQGVEPELRHAAREFFLNGGVEIDLESRTVHLTRIIKWYSVDFGQDRETLKWILNYLDPTKAGLLTHLLNDGGAINISYLNYDWSLNV</aaseq>

Gene Sequence

<dnaseqindica>1..1185#2946..3001#3228..3464#3555..3843#3935..4131#4296..4449#ATGGGGGAAGAGACCCTCGTGGCCATGCCGCTCGCGCCGCCGCATCACCACCACCACCACGCCCACCTCCCCGCGCTCCCGCACCTCGCCGCGCCGCCCCCGCCGCCACCGCCGCCCGCAGAGACCGAACTCACGGAACAGCGAGAAGAGGAGGTCCCGGTGGACGACGTCGTCGAGGCGTCGGCGGACGTGCCAAGGAGGGAGGAGGGCCTTGTCGTCGATGGGGGTGAGGACGTGTACTACGCGAGGAGGATGCTGCAGGGGGTGGTGCTCCGGCCGCCGCCGCACCTGCCGCAGCCGGAGGCACCGCCGGGGCTGACCAGGGCGCTCTCCGCGCCGGCGCCCGACGGGTACGTCGAGGAGGAGGAAGAGCAGAGGCCCGTCGAGAGGTCCGCCTCCGTGAACTCCGCGGCGTCCGCCGTCGTCGTGGACGTGGCCTCCATCGGGCGGTTCTTCCGCGACCGCCGCGACGTGCTCTCGTCGGCCATCACCCGGCGAATCTCCTCGCTGAAGGAGGCCTCCTCCTCCCCTCCTCCTCCGGTGGGGATGGACACCTACGGCGTGCAGGAGATCCACCTTCCCAACGTGAAGGTCACCGTCCGCCTCAAGGACGCCATCGAAGCCGACGCGGAGGAGGACGATGCTGTGGGCGGCGGCGGCGACGACGGCTACTCGTTCTCGGGCAGCCACATCAAGGGCCGTGTCAGCTTCTTCTCCCGCTCGGGCTGCCGCGACTGCGCCGCCGTGCGCGCCTTCTTCCGCCAGTCCGCCCTCCCCTACGTCGAGATCAACCTCGACGTCTTCCCGGAGCGCGAGGCCGAGTTCGCCTCCCGCGCGGGCGCCTCCGCGCGCGTGCCCCAGATCTTCCTCAACGAGAAGCTCCTCGGCGGCCTCGTCGTCCTCAACTCCCTGCGCAACAGCGGCGAGTTCGAGCGGCGCGTGCGTGACCTCGCCGGGAGACGGTGCCCCGACACCGCGCCGCGGGTGCCCGTGTACGGGTTCGACAACGATCCCGGCAAGGAGGGCGGCGACAGGGAGGACGCCATGGTGGGCATCGTGAGGGTGCTCCGGCACAGGCTCCCGATACAGGACCGGATCGTGAGGCTCAAGCTCGTCAAGAACTGCTTCTCCGGCGCCGACATGGTCGACGGCATCGTGAACCATTTGGAATGCAGCAGGAAGAAGGTCAGTACCACTTGATCATTTACTAGTACGATGCTTCTTCGTTTGACTTTTTGTTCTCTTTGGGTTTTTTTAAATCTCAACTTCTTAGGCGCTTCGTTTATCTTTGGTGAACTGTGCATGAAGCATGAATAGTTCTTGTTGTTTTTGGACTAAAGGGCTTGGGTGTAAATAGTTACGGAATGTTAGGGGAGAGTACCATTTTCATTGGGATTATTATAAGCTTAAAATGGATGGTTTAATTCAAGCAAAATATGTTTGCAATTTAAAAGTAATTTGTGAATAGAACTTTTATATACATGTTATTGGCGATCTAAAAGCAATGGCTGAAAAATAAACTTCGATGAAGAAAAAAAATCCAAAATTAGCTCCAAATTTAAAGTTGAAATTTTAAATTTTGACAAATAAGTATAAGTATAAGTGAAAAGATGAGGCCTGGAGTGCAGTGGTGCTTGTTTTGACATATCCTCAAAAATGTTTATTAATTATTAAACTTGCTATTCTTGAGACGAACTGGTAGTACCAATCTCTAGTGAACACTTTTGTCATACATTTAATACATTTAAGTCGCACGTAATTAAGGAAACAAACAAAATTCCACCTGGATTAAGGCGGCAAAAATCAGATGCTGCCATGTTTGGCCTGTGGCAACACTCTTTCTTGTGGCACCATATCCTGAGTTCCTGACCCCATAGATAATGTTGAAGTAGTAGTAGAGTACTACTAGAATATATTTACACTGAAAGCAAGGGGCCCAGATGCAAAACCACCTAGGATCACGTGAGCCGGGCGTGTGGGGGAGCGTTACGTGCTGCCGTGCCGAACCGGTCCGCGAGCACGGGCCCCACCGGGGTTCCGGCCATTTTCACTTCCCGCGTCACGCCGCAACGGGTGGGCGGGCGCGGCCCGGCACGTAACGGAACGGGCCAGGTGCCCGGGCCCACATTAGTTATGCAGGGTTCGGTTTCGTTGTTGGTTGCTTCCCGGGACCCACCTCCGACACCCGAAGGTTCATCGCCTTGGCGCGTACAGCGTGTCACTGCCATCCGGGCCCCACATGATTTCGTCTCACTTTTGTTTGATCGCTACGGGGGAAGAGCCGTGGCTAGACTAGTCGTCGTACAAAAGCTATGTGCGGATAAATGGGGCCCACATTTCGGTGTATGTTTTGACCTTGCCTAATCGAACTGGGTCGTGCTTATGTAGTGTACTTATGCTACAAGCGAGATTTTGTGCCGACCACGTTGGCGGTTGCTGCACCAACTCACACGGAAGTAATGCTCGGCTCAACGCGAACTTCGTGGTGTACTTGTACCAGGTCTAGGTGGTTAGTGGATTATTTTCGGTCAGGTCGATGCAAATCTGGAGGAGCTTGCTGGAAAATCTGGCGCATTTGACTAGTGATTAGTGGGGCTGTGGCGTCTCTGACTAGTGTGATTAGTGGGGTTGAGGTGAATGAACAACCGAAAGAAGCTCGTGTCCATTGGCCATAGCCTCCTCCTAGGTGGTTAAGCACCGACCCAACTAGCAGTTGTGCGATTTATTAGTGGGTTTATCTGAATTCCTGACCCAGTTTTTGACTTCTGTTGTCGCTGTTGTATCCTTATCCATAGTAGTCGCCATACATCCCGGACTCTTATGTCCTGCTCATTGGAGTCTTGCGTGGAATGCCATGGATTTGGGTTATCTTGTCCCCGTTTCGGAAATTCGGTTATTCATGTATAACAACTGACATCCAAAGCAACTGTTAACTCTGTCTGTAGGCTGTGGAGATCGGAAGAGAACTGGCAAGGAAGCACTTCATCCACCATGTCTTCAGGTCAGCACACACGATCTATTCTGAGGCCCTGTTTAGTTCCTCCAAAATGATAAAAGTTTTGCTGTTTTGATGTACTTTTTTTTTTCAAATGAATCTAAACACTAATAGCAAAAGTTGGTAATTTGGCATTTGTCATTTGGGAATCTAGAGCAGCAAATTTTGGCAAAAAAAAAAATATTGGATGAACTGAATCTAAATGTATTGGTGTCATGGTGTGTGTGTGTAGAGAGAACGACTTCGAGGATGGCAGCCAGAACCTGTACCGGTTCTTGGAGCACGACCCTGCCATCCCAAAGTACTACAACTTCATCAGGGGAGCCACCAACGACGGCGAGCCGAAGCTGGCCGCCGCCATCGGGCAGAGGATGACCAAGATCATGGTTGCCATCCTGGAGGCCTACGCCTCCGACGATCGCCGCCACCTCGACTACAGCCGCATCGCCGCCAGCGAGGAGTTCAGAAGGTAACAGCTGCTTCTTCCATTGCTTGGATACAACTACAAGCAGTGTTAATCCGGCAATGTCGGTGACCGTGATGAGTTCTTGCGACGCAGATACGCGAACATGGTGCAGGAACTCCAGAGGGTGGACATGTCGGCGCTCCCGGCCGAGGAGAGGCTACCGTTCTTCCTGAACCTGCACAACGCGATGGCCATCCACGCCGTCGTCAGGGTCGGCCAGCCGGGGGCCATCGACCGGCGGTCCTCCTTCTCCAACTTCCAGTACGTCGTCGGCGGGCACCCGTACTCGCTGGCGACGATCAGGAACGGCATCCTCCGGTCCAACCGCCGGCAGCCGTACACCATCGCCAAGCCGTTCGGCTCGTCCGACAAGAGGCTCGAGGTAATTAAGCACACGCATGCATGAGAGACGCCTGTGATCAATCACCGATTGCCATGGCGAGAGGAGCTGAAAATTTTTTTCGCTTGTGCAGTTGGTGCAGGGGAAGGTGAACCCGCTGGTCCATTTCGGCCTCTGTGACGCCACGAGGTCGAGCCCGATCGTGCGCTTCTTCTCCACGCAGGGGGTGGAGCCGGAGCTCCGGCACGCGGCGAGGGAGTTCTTCCTCAACGGCGGCGTGGAAATCGACCTCGAGAGCCGGACGGTTCACCTCACCAGGATCATCAAATGGTCAGTTCATTCTCATAATCTCATTTCATCCCCAATTGGTGCAATTTTCACTGAGAAGAACAACTTATTCAGAAATTCAGATTTCATCACAGCTAGTTTGATCATGAGTTCAGTCAATGTATTTGCAACATGAAGAATTCCTGAATAACCATCCCCTTGTGCAGGTACAGTGTTGATTTCGGGCAGGACAGGGAAACCCTCAAGTGGATCCTGAACTATTTGGACCCGACCAAAGCTGGGCTCTTGACACACCTCCTCAACGACGGTGGGGCGATCAACATCTCATATCTGAACTATGATTGGTCCTTGAATGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031671