Os09g0304500

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Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0304500| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001069355.1 GI:115478449 GeneID:4346668| Leng...")
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Gene Name

Os09g0304500

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001069355.1 GI:115478449 GeneID:4346668

Length

2006 bp

Definition

Oryza sativa Japonica Group Os09g0304500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:8319084..8321089

Sequence Coding Region

8319144..8319159,8319554..8321022

Expression

GEO Profiles:Os09g0304500

Genome Context

<gbrowseImage1> name=NC_008402:8319084..8321089 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:8319084..8321089 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagccaacagggagctgcagtatagacatccaacgtctcgccgccgatctcgagacaaagctatgcaatgtggatttggacggcggccggcgatggcgccgctcgccggagtgcctcatttccaaggtgaagccgcaggtccgccgcgtcgacgactcgcagtacaccccgcaggtggtgctcgtcggcgcctaccaccacaaaccgctggacagcacggaccagctggcgaagtggacggcactccgccgtgtcctccccgacgacggcgagcagcgggcgtccacgctgaggcggtgcctggaggcaatcgccggcgttgaggacgaagcgaggagctactacgaagacggcgccaagacatggagggagaatcagatgttcgtgcagatgctgttgctcgacgcgtggttcgtcctcgacatcttcaacgtcggcggcgaggcggctgcggcggtgggtagccgcggcgggagcgcggtggactacatcttcgccgtgcgcgacgtgttctacctgctcgagaaccagatacccttcttcatcctcgagaaggtctacgagctggtgcgtgtcggaaattccggccaggatcaagatcaacgcacgcaaacgtgtacttctcctccgcctcctcagcctccgggagctacagccatcgccggcggcggcccgtcgtcctcctccaccgttgttgtggatggattcttgcgccatctccggtcgctgctccaggaccagggctactcgaatgtggaggtggacatcaccagcacacgcccctgtcacctcgtccacttactccacatgcacttcacacccatggcgatgtcgccggccgacgacaccgacgacgctgccgctgtccccaacaggcgcgcgcgcgccaccgtttaccggtggcgcggggcgacgcagtaccacgccgccggcgtgaggttcaagaaacgggccctcggcgccgccgccggcgacgcgcggtgcgtcctcgacgtggagctccggcggctgacgacgctgcacgtcccgacgctgacggtggacaacaacacgtggcgggtcctgcgcaacctgatggcgctggagcagaacaacccacacctgggcagccacgtcacggcctactgcctcttcgtgtcgcagctagccggcacggcgagcgacgtcgcgctcctggcgaggaaaggcgtggtcgtgcacttcatggccaccgacgaggacgtcgccgacgggttcgccggcctgtgcaggggcgtggcgctcgacgtcgacgacgcgcgccggaactacctgcagccgacgtgggagaggatggagcggtggtacagcagccggccggtcaactggatggcgctgctgcggcggcggcatttgagcaacccgctggtggcgatcgcgctgctcgccgccattactggcctagtctgtgaagttgtgcaggccgtatatgcggtcaagacctacaggcctacaatctag</cdnaseq>

Protein Sequence

<aaseq>MGEPTGSCSIDIQRLAADLETKLCNVDLDGGRRWRRSPECLISK VKPQVRRVDDSQYTPQVVLVGAYHHKPLDSTDQLAKWTALRRVLPDDGEQRASTLRRC LEAIAGVEDEARSYYEDGAKTWRENQMFVQMLLLDAWFVLDIFNVGGEAAAAVGSRGG SAVDYIFAVRDVFYLLENQIPFFILEKVYELVRVGNSGQDQDQRTQTCTSPPPPQPPG ATAIAGGGPSSSSTVVVDGFLRHLRSLLQDQGYSNVEVDITSTRPCHLVHLLHMHFTP MAMSPADDTDDAAAVPNRRARATVYRWRGATQYHAAGVRFKKRALGAAAGDARCVLDV ELRRLTTLHVPTLTVDNNTWRVLRNLMALEQNNPHLGSHVTAYCLFVSQLAGTASDVA LLARKGVVVHFMATDEDVADGFAGLCRGVALDVDDARRNYLQPTWERMERWYSSRPVN WMALLRRRHLSNPLVAIALLAAITGLVCEVVQAVYAVKTYRPTI</aaseq>

Gene Sequence

<dnaseqindica>61..76#471..1939#aattccagacaatgaaacacatatgctactcgaaggaaacatgactgattaacggtacgtatgggggagccaacaggtatgcacaaatattctatattgatttgtcctttttcgtttagtttggcacatatatattactgtctctagcactcgtttatttatggattaccttaaattttctcacctccatcacattcaaattaatgaatttctgtgctagatggccaaaacaaattctgcgtacatgtggtatgcaattttatgagttttacttactgcatctatatatgcaggtttttcttcgtatttaacttactttcataaaaaaaataacaatcttgaattggtgaaacggccgaatgatttcatgtgctgccacactaatatatcagttgtcatttgaataacaaattctgaatgtttcaccctatgcatgatacatgcaattaattaaccaagaaaattttcagggagctgcagtatagacatccaacgtctcgccgccgatctcgagacaaagctatgcaatgtggatttggacggcggccggcgatggcgccgctcgccggagtgcctcatttccaaggtgaagccgcaggtccgccgcgtcgacgactcgcagtacaccccgcaggtggtgctcgtcggcgcctaccaccacaaaccgctggacagcacggaccagctggcgaagtggacggcactccgccgtgtcctccccgacgacggcgagcagcgggcgtccacgctgaggcggtgcctggaggcaatcgccggcgttgaggacgaagcgaggagctactacgaagacggcgccaagacatggagggagaatcagatgttcgtgcagatgctgttgctcgacgcgtggttcgtcctcgacatcttcaacgtcggcggcgaggcggctgcggcggtgggtagccgcggcgggagcgcggtggactacatcttcgccgtgcgcgacgtgttctacctgctcgagaaccagatacccttcttcatcctcgagaaggtctacgagctggtgcgtgtcggaaattccggccaggatcaagatcaacgcacgcaaacgtgtacttctcctccgcctcctcagcctccgggagctacagccatcgccggcggcggcccgtcgtcctcctccaccgttgttgtggatggattcttgcgccatctccggtcgctgctccaggaccagggctactcgaatgtggaggtggacatcaccagcacacgcccctgtcacctcgtccacttactccacatgcacttcacacccatggcgatgtcgccggccgacgacaccgacgacgctgccgctgtccccaacaggcgcgcgcgcgccaccgtttaccggtggcgcggggcgacgcagtaccacgccgccggcgtgaggttcaagaaacgggccctcggcgccgccgccggcgacgcgcggtgcgtcctcgacgtggagctccggcggctgacgacgctgcacgtcccgacgctgacggtggacaacaacacgtggcgggtcctgcgcaacctgatggcgctggagcagaacaacccacacctgggcagccacgtcacggcctactgcctcttcgtgtcgcagctagccggcacggcgagcgacgtcgcgctcctggcgaggaaaggcgtggtcgtgcacttcatggccaccgacgaggacgtcgccgacgggttcgccggcctgtgcaggggcgtggcgctcgacgtcgacgacgcgcgccggaactacctgcagccgacgtgggagaggatggagcggtggtacagcagccggccggtcaactggatggcgctgctgcggcggcggcatttgagcaacccgctggtggcgatcgcgctgctcgccgccattactggcctagtctgtgaagttgtgcaggccgtatatgcggtcaagacctacaggcctacaatctagctaggccactgtgccatatgcctaccaactttgcgtagcctatcaagtaacaagtatgactctgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0304500, RefSeq:Os09g0304500