BGIOSGA031681

From RiceWiki
Revision as of 04:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031681| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031681, complete gene.| tag = OsI_340...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031681

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031681, complete gene.

LocusTag

OsI_34054

Ensembl Transcript ID

BGIOSGA031681-TA

Ensembl Protein ID

BGIOSGA031681-PA

Length

3633

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16953244..16956876

Sequence Coding Region

16956764..16956876,16956589..16956697,16955196..16955415,16953244..16954322

Genome Context

<gbrowseImage1> name=IndicaChromosome10:16953244..16956876 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:16953244..16956876 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGGCGGGAGGTGTTGTAGTGCATTGCAACCATTGCCACCATGGATGATGGATGATGGATTCATGGTTGGATGGTGCCATGGTGGTGCTGCTGCCATTGGGGGAATGTGGGGACTTGGAAATTATCCGCGGGAGGATTTGGTGCGTGTCGCTGTTGGTGGTGGTGGTGATGGTCGGGGGCGTCGCTTTGGTTCTTGCCTTTTTAGGCTGGGCCTTTTGGACGAAACAGGGGTTTACAAGAACCTTCTCCAGGAAGTAGCACAGAGGGTTGGAGCACCATTGCCTTCGTATACAACAGAGCGATCTGGGCTTGGCCACCTTCCGGTTTTCACATGCACAGTAGAGCTAGCTGGGATTACATTTACAGGTGATCCTGCTAAGAACAAGAAACAAGCTGAAAAAAATGCTGCTTCAGCAGCTTGGTCTTCTCTGAGACAATTGGTACGTCAGGAAGCGAGTTCATCAAATGAACCTGAGAGCAATGATGAGCAGGAGCAGATCAGGATTGCTCGAGCTCTTCTCAACTATCGCCTGAAGGAGAAGATGGCGATGGCCAATAATCCACATGCTTCACCCTTCCCAAAGAAATTTCCGATGCAGCCCGAGAGGAGGACAGCATTTCCTCAATCCTCTCACTCCAGCTACTCGAAGATTCTCCCTCTGTTTCGCCCCAAGTCTAATTCAAGGTCAAGGCCAGAGTCGCCAGCAGCGTCTGATGCAGCATCACAGACTCCTTTCCGGCCAACTGAAAGTCCAAATCCAAGGTCAAGGTTCCCCGCTGCAGAGGCGGCTCCTTATGTCCCAGTTGGGCACTTCCGTATGCCTTGCCATAGCATGGCTCCTCCAGTCACAGTCAGGACTTCTATCCCTGTTTTCTCTGCTCCACCTCTCCCACCCCCAGGTGCGCGGACACAACAGCTTCCTCCTCTCATGAGCCACCCGCCGCCAATTCGAATGGCTTCCCCGGTTCGCATCAGGCCAGCTCCTCCTCTTTTTACTCCTTCAGCAGTCCAAGGGCCGAAACCTATGATGCCTGTTCAGATAAAGGATGTGCAACACCAACAAATAAAGGAAACCCGGTCACCTGTGATGCCTGTTCAGGTGAAGGATGCACAAAACCAGCTTCTTAAGGGATCCCTTTCACCTGTGATCCCTGTTCAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTTCAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTGGTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCAAATAA</cdnaseq>

Protein Sequence

<aaseq>MDGGRCCSALQPLPPWMMDDGFMVGWCHGGAAAIGGMWGLGNYPREDLVRVAVGGGGDGRGRRFGSCLFRLGLLDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFTCTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIARALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSIPVFSAPPLPPPGARTQQLPPLMSHPPPIRMASPVRIRPAPPLFTPSAVQGPKPMMPVQIKDVQHQQIKETRSPVMPVQVKDAQNQLLKGSLSPVIPVQIKDVQSQPPKEALSPAIPVQIKDVQLQPRNEPVSIGKGVVPLPAIRPPVKVEAPAEVKEASQPVAGSSVVQCKADTSPDSLPKTQLKTANADNADAKDDHLPVDAEEVEDIIRHLELK</aaseq>

Gene Sequence

<dnaseqindica>1..113#180..288#1462..1681#2555..3633#ATGGATGGCGGGAGGTGTTGTAGTGCATTGCAACCATTGCCACCATGGATGATGGATGATGGATTCATGGTTGGATGGTGCCATGGTGGTGCTGCTGCCATTGGGGGAATGTGGTGAGGTCTGCTGCCGCCTCAGCCCTAGCTAGTGCGGTGTTTGCTTCTCCCTGTCCTGGCTTTAAGGGGACTTGGAAATTATCCGCGGGAGGATTTGGTGCGTGTCGCTGTTGGTGGTGGTGGTGATGGTCGGGGGCGTCGCTTTGGTTCTTGCCTTTTTAGGCTGGGCCTTTTGGTGCGACCGCCACCGATGTGTGTTGGTCTGCATGGAGATCGTTTTGTTGAAATGGGGGTGATTTGGTATCAGATTTTCTTGTTTGTAAAGGTCATACTGTTTATTGCCATTGTAAAAAAAAACTTCGGCTGTCAGTTGGCGTTTAATATGAATAACTAAAATTTTGCAAAAATAGAAAAGCTTGCTAGTTGTCACAGTGATTTTGAACAAGAACTGGTCAAATGTTAGGCGTGTTCAAAGCTCCTCATAGTTGACTAGTACTGAGGGTTTTGACTGACAGAAACTGATTTGACCATTTGCTAGACGATCTGTCTTTTTTTTTTTCAAAATCAGTCATTATCTCTAAAAGAAATATTTAACTACAGAAGAAGTTACCATATCAATTGACTAAGTCAACAATGGCCTTGTAAGTAATTAAGTGATATAGTAAACTCACTAGCTGACTATACATGGAACTATTGTTCTTACACTTATACTCCAGTACTGCTGCCATGAATATGATAGCATTTCTTTTTTGTGTCTTGAAAATTTATTTACATATATGCTACTCAATGCTAAAAAAGTATCATCTGATTCATTAATCTAATTGAACTTGCGGTCAACTCAATACAGTCTTTTAAGTGCTGATGGTTGCACTCTGTATCAATTTTTATTAACTAATATACATGAAAAAAGCTTGGTTCATTTTATCCTTAAATTACCTAGCTAACTTGGAGTTGACTTGTATGTTTCTGTTAGTTTGATAGATGTTCCTTCTTATTCATTGCCCCTTTATTATCACCTGATCAGTTCACAGACTGCTCAACTAACACCCCCCATATTTAACCTCTTTTAAATCATTATCCTTACATTTGAAGTATTGTTCTGTTCAGCAATACCTTAATCCAGAAGTCAATCTTCCTTAGGATTCTGGTGCCTTTTCTTCTTTTTTTTTTATTTGGTTACTTCTGTTTCAATCAAGACTGAGTATTAATGGAAGTTTAACTAGCTAACATGGACATCATTGTACTCCTGTCATGAACTATTTTGCCAAGCTGTCTGTTAACCTTTTACATTTTCTATGATTTATGTTACCTTGCAATATGATCTGGCACCCACAAGTTTCATTCCTTGGTTTGTACTGTAAATTTTCCAGTCAGTTAATACATACTGTGATATGTTTCTCTTAAACAGGACGAAACAGGGGTTTACAAGAACCTTCTCCAGGAAGTAGCACAGAGGGTTGGAGCACCATTGCCTTCGTATACAACAGAGCGATCTGGGCTTGGCCACCTTCCGGTTTTCACATGCACAGTAGAGCTAGCTGGGATTACATTTACAGGTGATCCTGCTAAGAACAAGAAACAAGCTGAAAAAAATGCTGCTTCAGCAGCTTGGTCTTCTCTGAGACAATGTGAGTGTGACTGTCACCAGTTCCTTTCATAGTTCGTTCCACTGTACCATTGGTTAAACAAACAGTGTTGCCATTTCTAGTTCAATTTTTTCCTGCAATAATCATGTTTGACAAAAAAGTGTGGAAGATTTTGCAGTATGTTAGAAATGCTCATTGTGGCTTTAGAAGTGATTGTTTTGGTTTAGGTCCTTCAGAATATAAATGATTTGCTTGAACTTATCTAGCTAGGTGCACTTGTTTGTTGTGCGCTTGAACTTATCTAGCGGTCATAATGTTTGTTTTAGTTTGTGTGGAAGAATACCTGATTAGATGATAATTTGTTGTTGACATGTACTGGTCCATGCTCCATAGACTGTAATATCCATATTAGACAATTTGATTAGAGCAGGAGGAATTATATGACAACTTTGGATCTTATCTTGGGAAAAGACAAGCAACTCTAAAGTAATGTTGATTTAGTATGAACAATAATTAGATCAAGGTTGCTTGTTAACACCACATTTCTCACCATGTTACGTACACTTAGGATCACACAAAACATTTATTCATTCCTCCGGACATGTAAGTTGCAACCACATTAAGGTAACACTAAATGACTGCAAGAAAGTTCATGTTTAAAGCCACTTTATCATGGTAGGAATGTTTTTGTTTGCCTTCCGTTAATGCCACAATTTTGGCACACACAAATTTTGTTAGTCGGGGTTTCTGTACAGAGGAGCTGTACTTATTTGAACTTTTACTGAAAGTTCTATGTCCATATTCATTTTTCGGTTTAATGCTATGGAGTTTCTTTACAATGTTATTATGTCAGTTATATGTTGAATTGTATCATTACTATTGCATAATACCACTTATTTCTCCTATTTGGAACAGTGGTACGTCAGGAAGCGAGTTCATCAAATGAACCTGAGAGCAATGATGAGCAGGAGCAGATCAGGATTGCTCGAGCTCTTCTCAACTATCGCCTGAAGGAGAAGATGGCGATGGCCAATAATCCACATGCTTCACCCTTCCCAAAGAAATTTCCGATGCAGCCCGAGAGGAGGACAGCATTTCCTCAATCCTCTCACTCCAGCTACTCGAAGATTCTCCCTCTGTTTCGCCCCAAGTCTAATTCAAGGTCAAGGCCAGAGTCGCCAGCAGCGTCTGATGCAGCATCACAGACTCCTTTCCGGCCAACTGAAAGTCCAAATCCAAGGTCAAGGTTCCCCGCTGCAGAGGCGGCTCCTTATGTCCCAGTTGGGCACTTCCGTATGCCTTGCCATAGCATGGCTCCTCCAGTCACAGTCAGGACTTCTATCCCTGTTTTCTCTGCTCCACCTCTCCCACCCCCAGGTGCGCGGACACAACAGCTTCCTCCTCTCATGAGCCACCCGCCGCCAATTCGAATGGCTTCCCCGGTTCGCATCAGGCCAGCTCCTCCTCTTTTTACTCCTTCAGCAGTCCAAGGGCCGAAACCTATGATGCCTGTTCAGATAAAGGATGTGCAACACCAACAAATAAAGGAAACCCGGTCACCTGTGATGCCTGTTCAGGTGAAGGATGCACAAAACCAGCTTCTTAAGGGATCCCTTTCACCTGTGATCCCTGTTCAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTTCAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTGGTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031681