Os10g0573000

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Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0573000| Description = Similar to Carbohydrate kinase-like protein| Version = NM_001072000.1 GI:115483595 GeneID:4349470| Length = 2786 bp|...")
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Gene Name

Os10g0573000

Description

Similar to Carbohydrate kinase-like protein

Version

NM_001072000.1 GI:115483595 GeneID:4349470

Length

2786 bp

Definition

Oryza sativa Japonica Group Os10g0573000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23205534..23208319

Sequence Coding Region

23205584..23205913,23206288..23206553,23206666..23206783,23207097..23207305,23207552..23208005

Expression

GEO Profiles:Os10g0573000

Genome Context

<gbrowseImage1> name=NC_008403:23205534..23208319 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23205534..23208319 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcgcctcctcctcccgcctcctccaccgcttctcctcctcctctctgccgcgaccctgccggcgacgggtacccaggccacgcggccacagccgcttcgccgtgcggtgggagcaccgggcggcggcggtggtgctgctgctgccgagagctctcctcggaggaggattccaggatgccgatgcggctgagagtgacgacgaggaggaggaggatgcccatggcgtcctgcgcccgctcgacgctgacgacgtcaacctcgacctccacgcgcctccctccggccccgagcgctgggacgtcctcggcctcggccaggccatggttgatttctcagggatggtggacgacgagttccttcacagattgggcatacaaaagggtaccagaaaggttgtcaaccacgaggagagagggcgtgtcttgcgcgccatggatggttgcagctacaaggctgccgctggaggctcactgtccaactcgcttgtcgcgctatcaaggcttggtagtagccgctccactaactaccccgagcttagaatcgcgatggctggcagtgtgggcagcgacccacttggtagtttttacagggcaaaattgcgccgtgctaatttgcatttcttgtctaagccggtcaaagatgggactactggaactgtgattgttctaacaactccagatgcacaacgaactatgcttgcatatcagggaacatcgtcaactttgagttatgattcagatttggccagtctagtgtccaagtcaaatgtagtaattgtggaaggctacctatttgagctacctcacacgatcgaagccatcaagcaagcatgtgaagatgctcataagaatggctcacttattgcagttacagcatcagatgtgtcatgcatcaagcgttgctacaatgatttttgggatattgtaacaaactatgcggacatattattcgccaatgccaatgaagcgagggcattctgcgagctaagctcaacagatagccccatgtcagcggcaagatacttaagccattctgttcctctagtatccgtgacagatggtgtgcacggttcatacattggagtgaaaggggaagcgatatacatccctccaccaccatgtgtacctatagatacatgtggggctggtgatgcatacgcttcagggattctatatggcattcttcggggctcttcggatttgaagagcattggcctgctcgcttcgcgagtagctgctattgtcgttgcgcagcaaggtacacgcttacgggttcaggacgccgacagattggccgaatcattcacacttcacctagataacctggagttttgttcagatattgaaacagaccatgtttcaaacttctga</cdnaseq>

Protein Sequence

<aaseq>MALASSSRLLHRFSSSSLPRPCRRRVPRPRGHSRFAVRWEHRAA AVVLLLPRALLGGGFQDADAAESDDEEEEDAHGVLRPLDADDVNLDLHAPPSGPERWD VLGLGQAMVDFSGMVDDEFLHRLGIQKGTRKVVNHEERGRVLRAMDGCSYKAAAGGSL SNSLVALSRLGSSRSTNYPELRIAMAGSVGSDPLGSFYRAKLRRANLHFLSKPVKDGT TGTVIVLTTPDAQRTMLAYQGTSSTLSYDSDLASLVSKSNVVIVEGYLFELPHTIEAI KQACEDAHKNGSLIAVTASDVSCIKRCYNDFWDIVTNYADILFANANEARAFCELSST DSPMSAARYLSHSVPLVSVTDGVHGSYIGVKGEAIYIPPPPCVPIDTCGAGDAYASGI LYGILRGSSDLKSIGLLASRVAAIVVAQQGTRLRVQDADRLAESFTLHLDNLEFCSDI ETDHVSNF</aaseq>

Gene Sequence

<dnaseqindica>51..380#755..1020#1133..1250#1564..1772#2019..2472#gcggccgcgggagctccacggcatcgatcgccatcctctcctccgcaacaatggcgctcgcctcctcctcccgcctcctccaccgcttctcctcctcctctctgccgcgaccctgccggcgacgggtacccaggccacgcggccacagccgcttcgccgtgcggtgggagcaccgggcggcggcggtggtgctgctgctgccgagagctctcctcggaggaggattccaggatgccgatgcggctgagagtgacgacgaggaggaggaggatgcccatggcgtcctgcgcccgctcgacgctgacgacgtcaacctcgacctccacgcgcctccctccggccccgagcgctgggacgtcctcggcctcggccaggccatggtacgcccccatcttcttcaattctactctaaataagataaatctatattattgattcattcattaattacttcgtgttcctgatcgatgaacatttgcaaggaaccagtactcgcatacaagaaaattacttctcctatggtagaaatgtcgaattcgaaacggctaatttggctcaactgtcgccactgtatccactcactactcgtgtgcgtgcaacctgcatgaacgcttaataaaaagacggcttctttcttcctatgtgtttgtgttggaaataattatcactatgatgttgttctttctgtttcaataggttgttgagctgttgtgatcaatgctaatttgtggctgggattttggcctgcaaacaggttgatttctcagggatggtggacgacgagttccttcacagattgggcatacaaaagggtaccagaaaggttgtcaaccacgaggagagagggcgtgtcttgcgcgccatggatggttgcagctacaaggctgccgctggaggctcactgtccaactcgcttgtcgcgctatcaaggcttggtagtagccgctccactaactaccccgagcttagaatcgcgatggctggcagtgtgggcagcgacccacttggtagtttttacaggtagttcactagtttgacaacatatttttgcacgtactgatgtcttaattgctgcactagaagcttcagagtgttggctgacatcacactgttggttgaattgttctattagggcaaaattgcgccgtgctaatttgcatttcttgtctaagccggtcaaagatgggactactggaactgtgattgttctaacaactccagatgcacaacgaactatgcttgcatatcaggtcagttgatatgtttgtacttcagggttgttattcccccttctagggacttctgttgcaatatcagactaaattttaatttttgaagatgagtagtttaaccaggtctgcttttagtatgaatgtatcaatgagaaccaccatcagatatcaactttacttgacaggtcttattacttgttagctgtactttttgactcattgaacattcaccgtgtataatttacttactggacaactatatagaagtgttgctggcactaatataggagtatgaccttactgttccctttttgcgtgtgtgtatttccagggaacatcgtcaactttgagttatgattcagatttggccagtctagtgtccaagtcaaatgtagtaattgtggaaggctacctatttgagctacctcacacgatcgaagccatcaagcaagcatgtgaagatgctcataagaatggctcacttattgcagttacagcatcagatgtgtcatgcatcaagcgttgctacaatgatttttggtgagactagtctccttgcaaactatctcctgctagcatcacgttttttggggtgttgactgtattattttctctatattatgctagtgtaccactacctcatctctgaaccttattgtactgatggtaaaccaaaaatattttttatggtattaattgtatgctttctctatattatggagtgagccactatctcatctctgaactatactgtactgtactgaccataaaccaacgatttttcagggatattgtaacaaactatgcggacatattattcgccaatgccaatgaagcgagggcattctgcgagctaagctcaacagatagccccatgtcagcggcaagatacttaagccattctgttcctctagtatccgtgacagatggtgtgcacggttcatacattggagtgaaaggggaagcgatatacatccctccaccaccatgtgtacctatagatacatgtggggctggtgatgcatacgcttcagggattctatatggcattcttcggggctcttcggatttgaagagcattggcctgctcgcttcgcgagtagctgctattgtcgttgcgcagcaaggtacacgcttacgggttcaggacgccgacagattggccgaatcattcacacttcacctagataacctggagttttgttcagatattgaaacagaccatgtttcaaacttctgatcgttttagctgaaagtcgtaggacttccatttgtatatagcatctgtttacttttaggcctagctagctcattgttcagtacagctgagctacccagcttgtcagtcctttcagacgtttgttacaatttcattccttaaatttggttccagaaaaggatgctacatacttcatggatttcatattgaactgaagatattactcctagataaggcagtggcaatagttcatgtgctttcattggttcttgtgtacactcaagatacatgacatattttttatagataatgagagacatgacatataatcttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0573000, RefSeq:Os10g0573000