BGIOSGA031728

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Revision as of 04:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031728| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031728, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA031728

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031728, complete gene.

LocusTag

OSJNBA0006L06.16

Ensembl Transcript ID

BGIOSGA031728-TA

Ensembl Protein ID

BGIOSGA031728-PA

Length

5705

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15895362..15901066

Sequence Coding Region

15898168..15901066,15895362..15895780

Genome Context

<gbrowseImage1> name=IndicaChromosome10:15895362..15901066 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:15895362..15901066 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCGCCACGACGCGGGAACGCCGCCGCGGCGCGCGCGCGACCATGCACGCGGCGTGCTTGTGCTCCACCTGCTGCTCGTGTCGGCCTCGCTGCGCGGCGCGACGGCCGCGCCGGGCGAGGCGGAGGCGCTGCTCGCGTGGAAGGACACCCTGCCGCGCTCGGCGGCGGCGGCGGCCGGCGTCCTCGGGTCGTGGGCGACGCCATCGCCGCAGCAGCCGAACGCGAACCCCGCCGTCGCGGCGTGCGCGTGGCGCGGCGTGGCGTGCGACGCGTCGGGCGTCGTGGTGGGCGTCGACGTGGCCGGCGCGGGGGTCGCCGGGACGCTCGACGCCCTCGACCTCTCGTCGCTGCCGGGTCTCGCCGCGCTCAACCTCAGCCTCAACTCGCTCACGGGCTCCTTCCCGTCGAACGTGTCGTCGCCGCTGCTCAGCCTCCGGTCCATCGATCTGTCGAGCAACAACCTCTCCGGCCCGATCCCGGCGGCGCTGCCGGCGCTCATGCCCAACCTCGAGCACCTCAACCTCTCGTCCAACCAGTTCTCCGGCGAGATACCGGCGTCCCTCGCGAAGCTGACGAAGCTCCAGAGCGTCGTTCTTGGCTCCAACCTCCTCCACGGCGGCGTGCCGCCGGTGATCGGCAACATCTCCGGCCTGCGAACGCTCGAGCTCTCCGGTAACCCGTTGGGCGGCGCGATCCCTACCACTCTCGGCAAGCTCCGGTCGCTGGAACACATCAACGTCAGCCTCGCCGGGCTGGAGTCCACCATTCCCGACGAGCTCAGCCTCTGCGCCAACCTCACCGTCATTGGCCTCGCCGGGAACAAGCTCACCGGCAAGCTGCCGGTGGCGCTGGCGAGGCTGACGAGAGTGCGGGAGTTCAACGTCTCCAAGAACATGCTCTCCGGCGAGGTCTTGCCGGACTACTTCACCGCCTGGACCAACCTCGAGGTGTTCCAGGCGGACGGCAACCGGTTCACCGGCGAGATCCCCACGGCGATCGCCATGGCGTCGAGGCTGGAGTTCCTCTCCTTGGCGACCAACAACCTCTCCGGCGCGATCCCGCCGGTGATCGGAACGCTCGCCAACCTCAAGCTCCTCGACCTCGCCGAGAACAAGCTCGCCGGTGCGATCCCCCGCACGATCGGCAACCTCACGAGCCTCGAGACGCTGCGGCTGTACACCAACAAGCTCACCGGCCGGCTCCCCGACGAGCTCGGCGACATGGCGGCGCTGCAGAGGCTGTCCGTAAGCAGCAACATGCTGGAGGGCGAGCTCCCGGCGGGGCTCGCGCGGCTGCCGAGGCTCGTCGGCCTCGTCGCCTTCGACAACCTCCTCTCCGGGGCCATCCCGCCGGAGTTCGGCCGGAACGGCCAGCTCTCCATCGTCAGCATGGCGAACAACCGCTTCTCCGGCGAGCTGCCTCGTGGCGTGTGCGCGAGCGCGCCGCGGCTCCGGTGGCTCGGCCTCGACGACAACCAATTCTCCGGCACCGTGCCGGCGTGCTACCGCAACCTGACCAACCTTGTGCGCCTCCGGATGGCACGGAACAAGCTCGCCGGCGACGTGTCGGAGATCCTCGCGTCGCACCCCGACCTTTACTACCTTGACCTGTCCGGCAACTCGTTCGACGGCGAGCTCCCCGAGCACTGGGCGCAGTTCAAGAGCCTCTCGTTCCTCCACTTGAGCGGCAACAAGATCGCCGGAGCGATTCCGGCGAGCTACGGCGCCATGTCCCTGCAAGATTTGGACCTCTCGTCGAACCGTCTCGCCGGCGAGATCCCGCCGGAGCTCGGGAGCTTGCCGTTGACCAAGCTGAACCTGCGCCGCAACGCCTTGTCGGGACGTGTCCCTGCGACGCTCGGGAACGCCGCGAGAATGGAGATGCTCGACCTGTCCGGGAACGCGCTCGACGGCGGCGTGCCGGTGGAGCTGACGAAGCTGGCCGAGATGTGGTACCTCAACCTGAGCAGCAACAACCTCTCCGGCGAGGTGCCGCCCCTGCTCGGCAAGATGAGGTCGCTGACGACGCTGGATCTCAGCGGCAACCCCGGCCTGTGCGGCCACGACATTGCCGGGCTGAACTCTTGCAGCTCGAACACCACCACCGGCGACGGCCACTCCGGTAAGACGAGGCTGGTGCTCGCCGTCACGCTCTCCGTCGCCGCCGCGCTGCTGGTGTCCATGGTGGCCGTGGTTTGCGAGGTGTCACGCAAGGCGAGGCGAGCCGCCGTCGTCGTAGAGAAGGCGGAGACGTCGGCGAGCGGAGGCGGCGGGAGCTCGACGGCGGCGGCGGTGCAGGCCTCGATATGGAGCAAGGACACGACGTTCTCCTTCGGCGACATCCTGGCAGCGACGGAGCACTTCAACGACGCGTACTGCATCGGCAAGGGGAGCTTCGGGACCGTGTACCGCGCCGACCTCGGCGGCGGGCGCGCCGTCGCCGTGAAGCGGCTCGACGCGTCGGAGACCGGCGACGCGTGCTGGGGCGTCAGCGAGAGGAGCTTCGAGAACGAGGTGAGGGCGCTGACGCGGGTCCACCACCGCAACATCGTCAAGCTCCACGGCTTCTGCGCCATGGGCGGGTACATGTACCTCGTGTACGAGCTCGCCGAGCGGGGCAGCCTCGGCGCGGTGCTGTACGGCAGCGGCGGCGGCGGCGGCTGCAGGTTCGACTGGCCGGCGAGGATGAGGGCGATCAGGGGCGTCGCGCACGCGCTCGCCTACCTCCACCACGACTGCTCGCCGCCGATGATCCACCGCGACGTCTCCGTCAACAACGTCCTCCTCGACCCGGACTACGAGCCGCGGGTGTCGGACTTCGGCACGGCGAGGTTCCTCGTCCCCGGCCGCTCCACCTGCGACAGCATCGCCGGCTCCTACGGCTACATGGCACCAGAGCTGGCGTACATGAGGGTGACGACCAAGTGCGACGTGTACAGCTTCGGCGTCGTGGCGATGGAGATGCTCATGGGCAAGTACCCCGGCGGGCTCATCAGCTCGCTGCAACACTCGCCGCAGTCACTGTCAGCCGAGGGGCACGACAGCGGCGGCGGCGGCGAGGAGGCGTCGGCGTCGGCGTCGCGCCGGCTGCTGCTCAAGGACATGGTGGATCAGAGGCTGGACGCCCCGGCGGGGAAGCTGGCCGGGCAGGTCGTGTTCGCCTTCGTCGTGGCGCTGTCTTGCGTCCGGACGAGCCCCGACGCCCGGCCGACGATGCGCGCCGTCGCGCAGGAGCTCGCCGCTCGCCGGCGACCGATCCTGGACAGGCCGTTCGAGATGATCAAGATAGGCGATCTGACAAATTCTCACAGATGA</cdnaseq>

Protein Sequence

<aaseq>MKRHDAGTPPRRARDHARGVLVLHLLLVSASLRGATAAPGEAEALLAWKDTLPRSAAAAAGVLGSWATPSPQQPNANPAVAACAWRGVACDASGVVVGVDVAGAGVAGTLDALDLSSLPGLAALNLSLNSLTGSFPSNVSSPLLSLRSIDLSSNNLSGPIPAALPALMPNLEHLNLSSNQFSGEIPASLAKLTKLQSVVLGSNLLHGGVPPVIGNISGLRTLELSGNPLGGAIPTTLGKLRSLEHINVSLAGLESTIPDELSLCANLTVIGLAGNKLTGKLPVALARLTRVREFNVSKNMLSGEVLPDYFTAWTNLEVFQADGNRFTGEIPTAIAMASRLEFLSLATNNLSGAIPPVIGTLANLKLLDLAENKLAGAIPRTIGNLTSLETLRLYTNKLTGRLPDELGDMAALQRLSVSSNMLEGELPAGLARLPRLVGLVAFDNLLSGAIPPEFGRNGQLSIVSMANNRFSGELPRGVCASAPRLRWLGLDDNQFSGTVPACYRNLTNLVRLRMARNKLAGDVSEILASHPDLYYLDLSGNSFDGELPEHWAQFKSLSFLHLSGNKIAGAIPASYGAMSLQDLDLSSNRLAGEIPPELGSLPLTKLNLRRNALSGRVPATLGNAARMEMLDLSGNALDGGVPVELTKLAEMWYLNLSSNNLSGEVPPLLGKMRSLTTLDLSGNPGLCGHDIAGLNSCSSNTTTGDGHSGKTRLVLAVTLSVAAALLVSMVAVVCEVSRKARRAAVVVEKAETSASGGGGSSTAAAVQASIWSKDTTFSFGDILAATEHFNDAYCIGKGSFGTVYRADLGGGRAVAVKRLDASETGDACWGVSERSFENEVRALTRVHHRNIVKLHGFCAMGGYMYLVYELAERGSLGAVLYGSGGGGGCRFDWPARMRAIRGVAHALAYLHHDCSPPMIHRDVSVNNVLLDPDYEPRVSDFGTARFLVPGRSTCDSIAGSYGYMAPELAYMRVTTKCDVYSFGVVAMEMLMGKYPGGLISSLQHSPQSLSAEGHDSGGGGEEASASASRRLLLKDMVDQRLDAPAGKLAGQVVFAFVVALSCVRTSPDARPTMRAVAQELAARRRPILDRPFEMIKIGDLTNSHR</aaseq>

Gene Sequence

<dnaseqindica>1..2899#5287..5705#ATGAAGCGCCACGACGCGGGAACGCCGCCGCGGCGCGCGCGCGACCATGCACGCGGCGTGCTTGTGCTCCACCTGCTGCTCGTGTCGGCCTCGCTGCGCGGCGCGACGGCCGCGCCGGGCGAGGCGGAGGCGCTGCTCGCGTGGAAGGACACCCTGCCGCGCTCGGCGGCGGCGGCGGCCGGCGTCCTCGGGTCGTGGGCGACGCCATCGCCGCAGCAGCCGAACGCGAACCCCGCCGTCGCGGCGTGCGCGTGGCGCGGCGTGGCGTGCGACGCGTCGGGCGTCGTGGTGGGCGTCGACGTGGCCGGCGCGGGGGTCGCCGGGACGCTCGACGCCCTCGACCTCTCGTCGCTGCCGGGTCTCGCCGCGCTCAACCTCAGCCTCAACTCGCTCACGGGCTCCTTCCCGTCGAACGTGTCGTCGCCGCTGCTCAGCCTCCGGTCCATCGATCTGTCGAGCAACAACCTCTCCGGCCCGATCCCGGCGGCGCTGCCGGCGCTCATGCCCAACCTCGAGCACCTCAACCTCTCGTCCAACCAGTTCTCCGGCGAGATACCGGCGTCCCTCGCGAAGCTGACGAAGCTCCAGAGCGTCGTTCTTGGCTCCAACCTCCTCCACGGCGGCGTGCCGCCGGTGATCGGCAACATCTCCGGCCTGCGAACGCTCGAGCTCTCCGGTAACCCGTTGGGCGGCGCGATCCCTACCACTCTCGGCAAGCTCCGGTCGCTGGAACACATCAACGTCAGCCTCGCCGGGCTGGAGTCCACCATTCCCGACGAGCTCAGCCTCTGCGCCAACCTCACCGTCATTGGCCTCGCCGGGAACAAGCTCACCGGCAAGCTGCCGGTGGCGCTGGCGAGGCTGACGAGAGTGCGGGAGTTCAACGTCTCCAAGAACATGCTCTCCGGCGAGGTCTTGCCGGACTACTTCACCGCCTGGACCAACCTCGAGGTGTTCCAGGCGGACGGCAACCGGTTCACCGGCGAGATCCCCACGGCGATCGCCATGGCGTCGAGGCTGGAGTTCCTCTCCTTGGCGACCAACAACCTCTCCGGCGCGATCCCGCCGGTGATCGGAACGCTCGCCAACCTCAAGCTCCTCGACCTCGCCGAGAACAAGCTCGCCGGTGCGATCCCCCGCACGATCGGCAACCTCACGAGCCTCGAGACGCTGCGGCTGTACACCAACAAGCTCACCGGCCGGCTCCCCGACGAGCTCGGCGACATGGCGGCGCTGCAGAGGCTGTCCGTAAGCAGCAACATGCTGGAGGGCGAGCTCCCGGCGGGGCTCGCGCGGCTGCCGAGGCTCGTCGGCCTCGTCGCCTTCGACAACCTCCTCTCCGGGGCCATCCCGCCGGAGTTCGGCCGGAACGGCCAGCTCTCCATCGTCAGCATGGCGAACAACCGCTTCTCCGGCGAGCTGCCTCGTGGCGTGTGCGCGAGCGCGCCGCGGCTCCGGTGGCTCGGCCTCGACGACAACCAATTCTCCGGCACCGTGCCGGCGTGCTACCGCAACCTGACCAACCTTGTGCGCCTCCGGATGGCACGGAACAAGCTCGCCGGCGACGTGTCGGAGATCCTCGCGTCGCACCCCGACCTTTACTACCTTGACCTGTCCGGCAACTCGTTCGACGGCGAGCTCCCCGAGCACTGGGCGCAGTTCAAGAGCCTCTCGTTCCTCCACTTGAGCGGCAACAAGATCGCCGGAGCGATTCCGGCGAGCTACGGCGCCATGTCCCTGCAAGATTTGGACCTCTCGTCGAACCGTCTCGCCGGCGAGATCCCGCCGGAGCTCGGGAGCTTGCCGTTGACCAAGCTGAACCTGCGCCGCAACGCCTTGTCGGGACGTGTCCCTGCGACGCTCGGGAACGCCGCGAGAATGGAGATGCTCGACCTGTCCGGGAACGCGCTCGACGGCGGCGTGCCGGTGGAGCTGACGAAGCTGGCCGAGATGTGGTACCTCAACCTGAGCAGCAACAACCTCTCCGGCGAGGTGCCGCCCCTGCTCGGCAAGATGAGGTCGCTGACGACGCTGGATCTCAGCGGCAACCCCGGCCTGTGCGGCCACGACATTGCCGGGCTGAACTCTTGCAGCTCGAACACCACCACCGGCGACGGCCACTCCGGTAAGACGAGGCTGGTGCTCGCCGTCACGCTCTCCGTCGCCGCCGCGCTGCTGGTGTCCATGGTGGCCGTGGTTTGCGAGGTGTCACGCAAGGCGAGGCGAGCCGCCGTCGTCGTAGAGAAGGCGGAGACGTCGGCGAGCGGAGGCGGCGGGAGCTCGACGGCGGCGGCGGTGCAGGCCTCGATATGGAGCAAGGACACGACGTTCTCCTTCGGCGACATCCTGGCAGCGACGGAGCACTTCAACGACGCGTACTGCATCGGCAAGGGGAGCTTCGGGACCGTGTACCGCGCCGACCTCGGCGGCGGGCGCGCCGTCGCCGTGAAGCGGCTCGACGCGTCGGAGACCGGCGACGCGTGCTGGGGCGTCAGCGAGAGGAGCTTCGAGAACGAGGTGAGGGCGCTGACGCGGGTCCACCACCGCAACATCGTCAAGCTCCACGGCTTCTGCGCCATGGGCGGGTACATGTACCTCGTGTACGAGCTCGCCGAGCGGGGCAGCCTCGGCGCGGTGCTGTACGGCAGCGGCGGCGGCGGCGGCTGCAGGTTCGACTGGCCGGCGAGGATGAGGGCGATCAGGGGCGTCGCGCACGCGCTCGCCTACCTCCACCACGACTGCTCGCCGCCGATGATCCACCGCGACGTCTCCGTCAACAACGTCCTCCTCGACCCGGACTACGAGCCGCGGGTGTCGGACTTCGGCACGGCGAGGTTCCTCGTCCCCGGCCGCTCCACCTGCGACAGCATCGCCGGCTCCTACGGCTACATGGCACCAGGTACAAACTGTCCGTACATCCATAGCCACACAGGGTGAAAACGGTCGGAATCTAACGACGCTGCTAGTTGATCATATTTATCATTTAAACTACTCAGTACGTTATTAATGTGATGCATAAAGAAATTAGAAAAAACAAATTTTATATCTATGATATTTAAAATCTTAATAGTGGTGGTGTCCATTCGCACGCAATCTCTACCACTGACATATGGGTCTCATAATCTATACTATTACCTTTCACCTTTCAGCAAATCTTCAATTTCACCATTAGCTCTCCCAAATTTCAAAATCACCTACTTGTTGAAATAAGAAAAACTATAGTGTTACTTAGACTAAATAGGGTCTTATTATTAACTAGCTGGGTGACCCGCGCAATTGCGCGGCTAGCACCCAAACAAAATCATATATTATTTTAGTATGATTCATTTAAAATTTATTAAATAACTAGCTCATTGTCTTAAGACTTTGAAAGACCAAACCTTATCATCCTCATGTTTCTAATTATATAGTTTTTAAAAGTCACACCAGTTGCTACCCCTTATGTCATCTCTTTCTTTATTTGCTTGCTCGATCTATCACTATTTCTATTCATTCTTCTTGGAACATTTAAAAATTGGATTTTATAGTTTTTAGAGTTTATTGTTATGTTGGGTTTCATTTTCATAATATCTAGATGTCCCGTCAAACGTTGTCATTATACTCCTCTATGGCCCGTCCACTGTCTCTTCTCTTTATTGTCATTGAGATTTTTAAAATCGAACATAATTATCATTTGTGTTCATTTTTTACTTTCTAGAAGTCCCGCCAAACCGTCCGCGGCTTTGCCATTGTACTCCTCTACGGTTCGCCCGCTGCCTCCCTTCTTTATTGTCATTGAGATTTTAAAATCAAACATGATTATTATTGTTTTTTTTTTACTTTTTAGAAGTTCCAAATCTTTAAAAGTTGAACTTGTAGTTTTATTTTTTATAATTTTTAGAAGTCCCTTCAAACGATGCCATTATGCCCCTCTACAGCCCGTCCGCCGCCTACTCTTTATCGTCATTGTGATTCTAAAAATCGAACATAACTATCGTTAGAATTTATTTTTTATTTTCTAGAAGTCCCGTCAACCGTCGGCGGCTCTGCAACTATACTCTTATACACCCTGCCCACTGCTTTTCCTTTTTATTGTCATTGAGATTTTAAAAATCGAATATGATTATCAATGGTGTTTTTTTTACTTTCTAGAAGTCTCGGCAACCGCCTTACTTGTTTGCTTCACGGCCTACTTGACGTCCCTCCTTTTAATCGTCATTAGGATTCTATTTGGTATTTTATTAACAATTTTTATATGTCGTATCAACCGCCACCACTCTACTCCTTTATATGCATGGTACTTAATTTATCTCGTCATGTGTTTTAGATGGTTTTCTTTCAATAGTCTTTATTTTTATCACAAATTTTATACATTGCATTCCTAATTGAAATCTTATTTTTCTTTTTCTATTTTCAGAATTTATTTTTTTTTAGAAAAATTAGTTAATACCGTATTGTGTTTTTTTAATGTTTTTATTTTCTATTTTCAATTTTAGTTGTTTGAAAATTGTATTCCTACTTAAACTCTCTTTTAATTTTTCTAATTTTGGATATTATTTTATTTTTTATTCAAAATTTTTATTAATCTCGTATTAGGTTCTTATATGGATTCTTCATTCAATATTGCCTATTTTTAATTTCGAATTTCAGCTAATTTTAAATTGTATTCAAACTTGAACTCTTCTTTTATTTTCTTTTGCTAATTTTGGATTTATTTTTATTCCGAGTTTTAATTAATCTCATATTGGGTTCTTTTATGTACTCTTTTTTTAATATTCCTTATTTTTAATTCCAAATTTCAGTTATTTTTAAATTGTATTCTTACTTGGACTCTCCTTTTCTTTTCTAATTTTGGATATTATGTGATGTTTATTTTGAATTTGATTAATCTCGTATTGGGTTCTTATATGGAACTTATTTCAATATGCTTATTTTTAATTCTGAATTTCAGATATTTTTAAATTGTACTTCTACTTTGACTCTTCTTTTTTTTCCTTTTCTCTGATTAATGTGGGAATTTCTAGCCCCCACAGCGAACATAGTGCCTCCTTTCAATGCTGTTTTAATAATATAATAGATAGATTGATTGATTCAATAAGCTAGAAATTTAATTTGTTTTCTGTTGCAATGCACGAACTCTAAGCTAGTATAGCCAACAAAAAAAAAAGGAAAACCGTTGAAAACAGTGCCCCTTAAACATAAACAGCGCCCAATTGATTAAGAATTTTTGTGACCATTTTCACCCCTTATACACACCGAATCCGCCATTGACGCTGATACCATGTTTATCTTGCGGTCTTGCCGCAGAGCTGGCGTACATGAGGGTGACGACCAAGTGCGACGTGTACAGCTTCGGCGTCGTGGCGATGGAGATGCTCATGGGCAAGTACCCCGGCGGGCTCATCAGCTCGCTGCAACACTCGCCGCAGTCACTGTCAGCCGAGGGGCACGACAGCGGCGGCGGCGGCGAGGAGGCGTCGGCGTCGGCGTCGCGCCGGCTGCTGCTCAAGGACATGGTGGATCAGAGGCTGGACGCCCCGGCGGGGAAGCTGGCCGGGCAGGTCGTGTTCGCCTTCGTCGTGGCGCTGTCTTGCGTCCGGACGAGCCCCGACGCCCGGCCGACGATGCGCGCCGTCGCGCAGGAGCTCGCCGCTCGCCGGCGACCGATCCTGGACAGGCCGTTCGAGATGATCAAGATAGGCGATCTGACAAATTCTCACAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031728