BGIOSGA031762

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Revision as of 04:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031762| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031762, complete gene.| tag = OsI_339...")
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Gene Name

BGIOSGA031762

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031762, complete gene.

LocusTag

OsI_33908

Ensembl Transcript ID

BGIOSGA031762-TA

Ensembl Protein ID

BGIOSGA031762-PA

Length

3398

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15507953..15511350

Sequence Coding Region

15511157..15511350,15509762..15509963,15509417..15509673,15508198..15508635,15507953..15508028

Genome Context

<gbrowseImage1> name=IndicaChromosome10:15507953..15511350 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:15507953..15511350 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCAAAATACATGTATGGATCGAGCTCCATGAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAGGAGGGATGCAGTAGTCAGTAGAGAATCCATCCAGAAAAGAGAATACCTTCAACCGATCGACGCGTGCTCCCCTGGAAGGGAGCGAATGAGCGATCGATGTGCTGCTGAACAAATGGGAGATGATCCTACTATTAAAGCAGGATGCACATTTGTTGACAAGAGTGCATTTGTTTTGACCATTAGACAACATGCCATTAAGAATGAATTTGAGACTAACATCAAACATAGCAATAAAGATAGGTACAGGGCAAAGTGTGCAGACCCTGATTGCAAGTGGGTTGTTTATGCAAAAAGAGTTCTTGGTGATGTCATGTTCATGATTGTGAACATAGGTCCTGCCCATACATGCGCAAGCACAAGTAGAATGCAAGGCAAGGAAGCTTCTACGGCATGGATCTGTGATAGGGCAAAGGATTTGATTATAAGGACACCTGCACTCAGGCCCAAGGATTTGCATGAAACACTTCAGACTCGATTCAATATTGACTTGTCGTATAACAAGGTATGGGCTGGTATGAAGAAGGCGAAGGATGAGCTCCATGGGACTTGGGAGCAAAGCTTTAAGATGTTATGGGGTGTCATACAAGAGCTACACCAGAAGAGTAGAGGCCTTCATTACACCATACAGAGGAGCACTGCCACCAAAGCTCAAGTGAAAGGACCAAGTAAGGGAACAGGACAGTGGGGGTTCTGTGTGGACTTGGAAACAAAGACATGCTCATGTGGACAATGGGATGTGTCAGGAAAACCTTGCACTCATGCTATTGCCTTCATAGGCTCAATTAGGAAGTGCCATGTTGAGTTATTTGTTGATGACTTCTACTCTGTAGAAAGGTTTAAAGCAATGTATGAATTTGCAGTGAACCCACTAGATGACAAGTCACAATGGCCTTTGGTTGATCCCGGGTTTGATATGAGACCTCCAAAGTTAGAGACATCCGCAGGAAGGCCTAGGAAAAGAAGGATAAAATCTAGTGGAGAACCTGGTAAAAGGGGTCCATATCAGTGCAAAAGGAAGAAAAAGGCAGCCGAGCCCAAGCAGAACTTCTCTGATGCTGCATCAGAAAACACAAATTCACATGCTAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MCKIHVWIELHEKKKKKKKKKKEKKRRDAVVSRESIQKREYLQPIDACSPGRERMSDRCAAEQMGDDPTIKAGCTFVDKSAFVLTIRQHAIKNEFETNIKHSNKDRYRAKCADPDCKWVVYAKRVLGDVMFMIVNIGPAHTCASTSRMQGKEASTAWICDRAKDLIIRTPALRPKDLHETLQTRFNIDLSYNKVWAGMKKAKDELHGTWEQSFKMLWGVIQELHQKSRGLHYTIQRSTATKAQVKGPSKGTGQWGFCVDLETKTCSCGQWDVSGKPCTHAIAFIGSIRKCHVELFVDDFYSVERFKAMYEFAVNPLDDKSQWPLVDPGFDMRPPKLETSAGRPRKRRIKSSGEPGKRGPYQCKRKKKAAEPKQNFSDAASENTNSHAR</aaseq>

Gene Sequence

<dnaseqindica>1..194#1388..1589#1678..1934#2716..3153#3323..3398#ATGTGCAAAATACATGTATGGATCGAGCTCCATGAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAGGAGGGATGCAGTAGTCAGTAGAGAATCCATCCAGAAAAGAGAATACCTTCAACCGATCGACGCGTGCTCCCCTGGAAGGGAGCGAATGAGCGATCGATGTGCTGCTGAACAAATGGGGTGAGGGCGTGAGCCCGTCTGTGGACTGTGGTGGAGTAGTACAGTATTTTATTGGGGCGTATTAAGTTCTCGTGGTAGACTGGTAGGTTTGGGTAGTACTGCTCCTCCAATACCAATAGCGAGCGAACAGACAACTCTTGTCAGATTTGAGTACTCCATAGTACTTCGTAGGTACTAGGTACAGTACTCCTAGACACTAGGGCTGCATCGCCTTGTCTTGTCACTGTCAGCTGTGCTAAAGGACTGCGTCGGCTATTCGCATGCGCGGTCAGGCGCGGTACAGGGCAGCATGGGCTCTACTAGCTACAACTACAGGAGTAGGAGTACTCGGCTGCACTAAATATTTGCTACAGTAATGACGAATTAATTAGGTTTAATAAATTCATCTCGCCTTTTTCGGACGGAATCTGTAATTTATTTTATTATTAGACAACGTTTAATACTTCAAATGTATGTGCATATATCCGATGTGATAATCAAATCTAAAAATTTTTCCAAACTAAATACTTCCTCCGTCCCAAGATATAAGTATTTTTAGTTATAAATTTGGACAACCGTGTGTCCAGATTCATAGCCAAAGTTGCTATATTTTAGGATAAAGGTAGTACTAACGTATGTACTGCTAGTACAACGAGTAATCCACAAATAGATATAGGTGGTGCTATAATAAAGATGAAGATTAAGTGTTTCACGCAAAACGAGACGGTAGTAACGTGTAATTGAGTTTTAATCATTACAAACTTGAAAAATGGATTAATCTGATGTTTTAGAGCAACTTTCATATAAAAAGTTTTCGCACGAAACACACTGTTTAGCAGTTTAAAAAGCGTGTCATCAGAATCTAAAATTTCATCCGATATTTGTTGGACATTCGAAGGCAGCAGCCCAAAAATGTGAAAGTTCCTCCATTAGGCTGGGTTCTTTTGTCATGGTTAGGAACACTACCTCTAGCATGGAAAATGAAGCAATCCATTAGCGAGTGGTTAATTAAGTATTAGTTAATTTTTTTTAAAAAAATGATCAATATGATTGTTTTAAACAACTTTTATATAAAAATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCAAGATCATGGTACTAACAATGTCCCTAGAGATGAAGTTGTTCTAGATACAGCAATTGTTCCACACACATCTTATGATAGAGATGATCCTACTATTAAAGCAGGATGCACATTTGTTGACAAGAGTGCATTTGTTTTGACCATTAGACAACATGCCATTAAGAATGAATTTGAGACTAACATCAAACATAGCAATAAAGATAGGTACAGGGCAAAGTGTGCAGACCCTGATTGCAAGTGGGTTGTTTATGCAAAAAGAGTTCTTGGTGATGTCATGTTCATGGTATTTCTCGTCCTATGCTATTTTGCATTTCATTATTTGAATGAAACTTTTTTTATTACTAATGTGCTATAAACTATTGATATTGCAGATTGTGAACATAGGTCCTGCCCATACATGCGCAAGCACAAGTAGAATGCAAGGCAAGGAAGCTTCTACGGCATGGATCTGTGATAGGGCAAAGGATTTGATTATAAGGACACCTGCACTCAGGCCCAAGGATTTGCATGAAACACTTCAGACTCGATTCAATATTGACTTGTCGTATAACAAGGTATGGGCTGGTATGAAGAAGGCGAAGGATGAGCTCCATGGGACTTGGGAGCAAAGCTTTAAGATGTTATGGGGGTTCAAAGCGGCCCTAGAAGAAGCATGCCCTAGGAGTATAGTGGAGATAGATTGCAAAAAGGTAGGAGGTCAAATCATGTTCTCAAGGATGTTTGTGGCTATAAGAGCTTGTGTGGATGGATTTTTAGTTGGATGCAGACCTTACCTAGGAGTAGATTCCACTCACTTGACTGGACGATACAATGGACAACTTGCCGCAGCAACGGCAATAGATGGTCACAATTGGATGTATCCTGTGGCTTATGGAATTTTCTATAGAGAGAATACAAGTAACTGGAGCTGGTTCATGACACAACTCAAAAGAGCAATAGGCACTCCTCAAGGTTTGACCATCCATACAGATGCATGCAAGGGTCTTGAGGATGCTGTCGCAACTGTTTTTGGAAATTCAGCAGAGCATAGAGAGTGTTTTAGACACCTCATGAGTAACTTTAGAAAGAAATTCAAGGGAGATGTTCTCAAGTATATGTGGCCTTGTGCTTGGGCATGTCAGGGAGTTAAGACACCAACAATTGATTGATAGTATTGCTACCACTTGTCCACAAGCCATCCCTTACTTAAAGACTTATCACAAACACTTGTGGAGTAGGGCCCAATTTTCAAGACAGTGCAAGGTTGATTATGTCAACAACAACATATCTGAATGTTTTAATAGCTGGATAAAAGATCTCAAGGACCTCCCTGTTGTTGATTTGATGAACAAGATAAGGGAAAAAATCATGCAGAAGATATACACAAGAAGTGTTATAGCTGATAATTTGCATGGGAGAATCCTTCCTAGTGTCATACAAGAGCTACACCAGAAGAGTAGAGGCCTTCATTACACCATACAGAGGAGCACTGCCACCAAAGCTCAAGTGAAAGGACCAAGTAAGGGAACAGGACAGTGGGGGTTCTGTGTGGACTTGGAAACAAAGACATGCTCATGTGGACAATGGGATGTGTCAGGAAAACCTTGCACTCATGCTATTGCCTTCATAGGCTCAATTAGGAAGTGCCATGTTGAGTTATTTGTTGATGACTTCTACTCTGTAGAAAGGTTTAAAGCAATGTATGAATTTGCAGTGAACCCACTAGATGACAAGTCACAATGGCCTTTGGTTGATCCCGGGTTTGATATGAGACCTCCAAAGTTAGAGACATCCGCAGGAAGGCCTAGGAAAAGAAGGATAAAATCTAGTGGAGAACCTGGTAAAAGGGGTCCATATCAGTGCAAAAGGTGCTTTTAGTTTGGCCACATTGAGAGGACCTGTGATCTACCCCAAGCTGAACCTAACTATGTGCTGCCAGCTCTGCCTCCTAGAAGAAACAAGTAACTTTGATCTTCTTTACTAGGCAAGTATTATGTGTGCAATGAAAATATATAATGTAAACTTGTTTACTTGTAGGAAGAAAAAGGCAGCCGAGCCCAAGCAGAACTTCTCTGATGCTGCATCAGAAAACACAAATTCACATGCTAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031762