BGIOSGA031839

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Revision as of 04:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031839| Description = BGIOSGA031839| Definition = Oryza sativa Indica Group BGIOSGA031839, complete gene.| tag = | tid = BGIOSGA031839-TA|...")
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Gene Name

BGIOSGA031839

Description

BGIOSGA031839

Definition

Oryza sativa Indica Group BGIOSGA031839, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA031839-TA

Ensembl Protein ID

BGIOSGA031839-PA

Length

1491

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14311444..14312934

Sequence Coding Region

14312155..14312934,14311444..14311545

Genome Context

<gbrowseImage1> name=IndicaChromosome10:14311444..14312934 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:14311444..14312934 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCNNNGCGCGCTCTNGCCGAGNAAGACACNNGGGCGCGNAAACTCATNNGCAGGTCTAGGCGTCCGGCAGAGACTTCCCCGCGNGGTGGTCGTGTCTGTCGCCCGGAGGCGGCGCGGGAACGTCCTCCGGAGCCAGGACCTCGCGTTCTCCGACCGCTACGTCAGCACCACCATCGCCGCGATCTACCTCGCCGGCCGGGACCTCGCCTTCGCGCCCTACGGCGATCGGTGGCGGCAGCTGCGGAAGCTCTGCACGCAGCGGCTGCTGACCGCGGCGCGGGTGAGGTCGTTCCGGTGCGTCCGCGAGGAGGAGGTGGCGCGCCTCGTGCGCGACCTGGCGGCCTCCGCCGCCGCCGGCGAGGCCGTGGACCTCACCGCGAGGGTGGCCGAGCTCGTCAACGACGTCGTGGTGAGGTGCTGCATCGGCGGGCGCCGGAGCAGGTACCGCGACGAGTTCCTCGACGCCCTCCGCACCGCGCTGGACCAGACGACGTGGCTCACCGTCGCCGACGTCTTCCCGTCGAGCAAGCTGGCGCGGATGCTCGGCACGGCGCCGCGGAAGGCTCTCGCTTCCCGCAAGAAGATGGAGCGCATCCTGGAGCAGATCATCCAAGAACGGAAGCAGATCAAGGAGAGGAGCACCGGCGCCGGCGCCGGCGCCGACGACGAGGCGGCGGCGGCCGGAAACGAGTGCTTTCTGGACGTGCTGTTGAGGCTGCAGAAGGAAGGCGACACACCGATCCCAATCACAAACGAAACCATGATGTTGCTTCTACACCCTGAGGAAATCGATATGAGAGAGGCACCTGGACTTGTTGGGCCTAAACGCACCAGCCTATATTTGCACCCTGTTACTCGTGTTGCTCCAAGCAGTGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MXXALXPXKTXGRXNSXAGLGVRQRLPRXVVVSVARRRRGNVLRSQDLAFSDRYVSTTIAAIYLAGRDLAFAPYGDRWRQLRKLCTQRLLTAARVRSFRCVREEEVARLVRDLAASAAAGEAVDLTARVAELVNDVVVRCCIGGRRSRYRDEFLDALRTALDQTTWLTVADVFPSSKLARMLGTAPRKALASRKKMERILEQIIQERKQIKERSTGAGAGADDEAAAAGNECFLDVLLRLQKEGDTPIPITNETMMLLLHPEEIDMREAPGLVGPKRTSLYLHPVTRVAPSSV</aaseq>

Gene Sequence

<dnaseqindica>1..780#1390..1491#ATGCNNNGCGCGCTCTNGCCGAGNAAGACACNNGGGCGCGNAAACTCATNNGCAGGTCTAGGCGTCCGGCAGAGACTTCCCCGCGNGGTGGTCGTGTCTGTCGCCCGGAGGCGGCGCGGGAACGTCCTCCGGAGCCAGGACCTCGCGTTCTCCGACCGCTACGTCAGCACCACCATCGCCGCGATCTACCTCGCCGGCCGGGACCTCGCCTTCGCGCCCTACGGCGATCGGTGGCGGCAGCTGCGGAAGCTCTGCACGCAGCGGCTGCTGACCGCGGCGCGGGTGAGGTCGTTCCGGTGCGTCCGCGAGGAGGAGGTGGCGCGCCTCGTGCGCGACCTGGCGGCCTCCGCCGCCGCCGGCGAGGCCGTGGACCTCACCGCGAGGGTGGCCGAGCTCGTCAACGACGTCGTGGTGAGGTGCTGCATCGGCGGGCGCCGGAGCAGGTACCGCGACGAGTTCCTCGACGCCCTCCGCACCGCGCTGGACCAGACGACGTGGCTCACCGTCGCCGACGTCTTCCCGTCGAGCAAGCTGGCGCGGATGCTCGGCACGGCGCCGCGGAAGGCTCTCGCTTCCCGCAAGAAGATGGAGCGCATCCTGGAGCAGATCATCCAAGAACGGAAGCAGATCAAGGAGAGGAGCACCGGCGCCGGCGCCGGCGCCGACGACGAGGCGGCGGCGGCCGGAAACGAGTGCTTTCTGGACGTGCTGTTGAGGCTGCAGAAGGAAGGCGACACACCGATCCCAATCACAAACGAAACCATGATGTTGCTTCTACACGTAAGGATTAATTGCTTCTATATACCTCCTTTATCTAAAAATACTTAAAAACAAAGGAAGGTACTCCCTCCGTTTCATAAACGCTTTAATTTAATCTAGTATGAAAAAACATGGTAACATTTTCATACCAAACNAAAACATAGTATTAAAATGCATTCAATATTAAATTTAGTGGGACTAATTTGGTGTTATGATAGTTGCTATATTTCTCTAAAGATTTGATCNAACCTACTTAAGTTTGACATAAAAAAGAGTAAAAGAGAGACTTATAGCGTGGAATGCAGTGGATAGTTTTTTCAATTAATTTTTCAGTCGGTTTCTTACTTCATTCCACAATGAGTGTAATTCTAATGTTTAAATTTTATCCAACAAAGAGCAGCTTGTCCCATCAACCACTTCTCACTTAAAATTAATTTCTTTCCTTTTACCTAACCACGTACTCTCCCACAGATTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAATATGTCCAGGTATAACTCTTGGTATGGCCAACGTAGAATTCCCCTTGGCTAGTTTGCTTTACCATTTTGATTGGAAACTTCCTAATCAAATGGAGCCTGAGGAAATCGATATGAGAGAGGCACCTGGACTTGTTGGGCCTAAACGCACCAGCCTATATTTGCACCCTGTTACTCGTGTTGCTCCAAGCAGTGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031839