Os10g0575700

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Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0575700| Description = PAP fibrillin family protein| Version = NM_001072014.2 GI:297610992 GeneID:4349489| Length = 2269 bp| Definition = ...")
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Gene Name

Os10g0575700

Description

PAP fibrillin family protein

Version

NM_001072014.2 GI:297610992 GeneID:4349489

Length

2269 bp

Definition

Oryza sativa Japonica Group Os10g0575700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23375806..23378074

Sequence Coding Region

23375806..23376416,23376692..23376887,23377652..23378074

Expression

GEO Profiles:Os10g0575700

Genome Context

<gbrowseImage1> name=NC_008403:23375806..23378074 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23375806..23378074 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgcctcccccgctcttcgccgccgcctcccacgcctccctcctcctcccctcccccaccatccacagctccaccggatctcgccgccccttccgcctccccctccgctcctcccgccgcccgcccgtcgcagcagcagctgcctctggcgtccccgacgagtggggcgaccgctcgccctccgcgcccgagccgccctcccagcccgacccccccatcgacgacgacgagtggggccgcgacgacccctccgcctccgggaactctcgccccgtcctcgtcaccgacgagtggggcgagccgggtgtgcccgagccccaatccacctccgccgccgacccccctaccaacgacgacgagtggggtggggatccggcgccaccgccaccgccacctcctgtgccggaggaagacaacgaggaggaaaggcgggaggagctcaagcgctgcttggtggacactgtgtacggctccgacctgggcttccgggcgtcctccgaggtgaggggggaggtgctagagctcgtcacccagctcgaggccaccaatcccacgcccgagcccgtccaggccacccacctcctcgccggcaactggatcctcatatatacagcgtattctgagcttctacctatcctagcagttggtgcagcaccattgttcaaagtcgatgagatatcgcaagaaattgacacaaatagcatgaccatagtcaatgcctcaactatctcaagtccattcgcttcgttttctttcagtgccactgcttcttttgatgtacagagtccatcaaggatagagaagcttgagatgtgcatagaaattattgagatttctgatcatcaactttcttgtgcaaatatgtacattgaccaaactgacatgttgatggtcattccaatgaaggtccaattcaaagagggaagctttcagccaccgaagatatcatcatcggtagacctacctgcagaggttgatatatttgggcagaagatcagcttgggcccagtccagcaggtgctgaaccctctgcagcaagcctttgcaagtattgcaggatccatttctgggcagccacccctcaagttacccatccctggcaacaacagggcccggtcttggctgctgacgacctacctagacaaggacctcaggatctccagaggtgatggaggtctcttcattcttgtcaaagagggtagccctctactagatcaattatag</cdnaseq>

Protein Sequence

<aaseq>MAMPPPLFAAASHASLLLPSPTIHSSTGSRRPFRLPLRSSRRPP VAAAAASGVPDEWGDRSPSAPEPPSQPDPPIDDDEWGRDDPSASGNSRPVLVTDEWGE PGVPEPQSTSAADPPTNDDEWGGDPAPPPPPPPVPEEDNEEERREELKRCLVDTVYGS DLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELLPILAVG AAPLFKVDEISQEIDTNSMTIVNASTISSPFASFSFSATASFDVQSPSRIEKLEMCIE IIEISDHQLSCANMYIDQTDMLMVIPMKVQFKEGSFQPPKISSSVDLPAEVDIFGQKI SLGPVQQVLNPLQQAFASIAGSISGQPPLKLPIPGNNRARSWLLTTYLDKDLRISRGD GGLFILVKEGSPLLDQL</aaseq>

Gene Sequence

<dnaseqindica>1..611#887..1082#1847..2269#atggccatgcctcccccgctcttcgccgccgcctcccacgcctccctcctcctcccctcccccaccatccacagctccaccggatctcgccgccccttccgcctccccctccgctcctcccgccgcccgcccgtcgcagcagcagctgcctctggcgtccccgacgagtggggcgaccgctcgccctccgcgcccgagccgccctcccagcccgacccccccatcgacgacgacgagtggggccgcgacgacccctccgcctccgggaactctcgccccgtcctcgtcaccgacgagtggggcgagccgggtgtgcccgagccccaatccacctccgccgccgacccccctaccaacgacgacgagtggggtggggatccggcgccaccgccaccgccacctcctgtgccggaggaagacaacgaggaggaaaggcgggaggagctcaagcgctgcttggtggacactgtgtacggctccgacctgggcttccgggcgtcctccgaggtgaggggggaggtgctagagctcgtcacccagctcgaggccaccaatcccacgcccgagcccgtccaggccacccacctcctcgccggcaactggatcctcatgtcagtacttactattctactctctacacacgctctcctctacttcctttcttccttcttctactactacattgtcttcattggactacaataccactcaactactactagttgttattggtgaaatgtcaaatgctaagcttaacatcatttattagattttcattttcaatgaaaacgtttgctgttcctgaaatatgtcttgtgttgatgtcatcagcatctttttactagataactgatcgtctcaattgtgcatggtcatttacttgcagatatacagcgtattctgagcttctacctatcctagcagttggtgcagcaccattgttcaaagtcgatgagatatcgcaagaaattgacacaaatagcatgaccatagtcaatgcctcaactatctcaagtccattcgcttcgttttctttcagtgccactgcttcttttgatgtacagagtccatcaaggatagaggtacaaaattccttgctataaaatgaatcttgtgcttctttggattcagtaccatcatcttgtttggaatagagctgtttattcagtcatgaatataggtaatctaaaagaatttttttgaccgtttgtttgttgggaaactaaaaatgccatgctaccttgtttgatttcttccaataacctgtattaagtttactttgctagatatctctacctactaattctagtggaattcagttagcaacacaaatgttaaagtaagttttatgacttctgtttcctgccataaaagggtacactatgcatgcctgaattgacaagccgctaattttgtctttgatggtcgtacatcaactcaacgtcagagatttccgttccttttaatcaaaaaggttttctagttcatcaaccaagttactattagatgctacttataggcttgaacagtatggaatatgcagtttctattagatgctaggattgaacaatatggattatgcagtttctattagatgctacttctaggcttgaacaatatggaatagctgggggaggggccgagggggacctttcctggttaggcatagatatgattctcgctagctaaaatctgcacaactcgctagctcaaatcttgtaggatccaaaatgtgtatccatagatctgaagacacataacaaggaggattatagacttgtacaaatatttctgcttgttgaacctgtatttatcaaggatttctacacaaacctcggtgcaccagaagcttgagatgtgcatagaaattattgagatttctgatcatcaactttcttgtgcaaatatgtacattgaccaaactgacatgttgatggtcattccaatgaaggtccaattcaaagagggaagctttcagccaccgaagatatcatcatcggtagacctacctgcagaggttgatatatttgggcagaagatcagcttgggcccagtccagcaggtgctgaaccctctgcagcaagcctttgcaagtattgcaggatccatttctgggcagccacccctcaagttacccatccctggcaacaacagggcccggtcttggctgctgacgacctacctagacaaggacctcaggatctccagaggtgatggaggtctcttcattcttgtcaaagagggtagccctctactagatcaattatag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0575700, RefSeq:Os10g0575700