Os10g0577000

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Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0577000| Description = NERD domain containing protein| Version = NM_001072020.1 GI:115483635 GeneID:4349495| Length = 2984 bp| Definition ...")
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Gene Name

Os10g0577000

Description

NERD domain containing protein

Version

NM_001072020.1 GI:115483635 GeneID:4349495

Length

2984 bp

Definition

Oryza sativa Japonica Group Os10g0577000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23442158..23445141

Sequence Coding Region

23442329..23442510,23442883..23443028,23443196..23443384,23443502..23443617,23444305..23444419
,23444710..23444811,23444880..23445016

Expression

GEO Profiles:Os10g0577000

Genome Context

<gbrowseImage1> name=NC_008403:23442158..23445141 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23442158..23445141 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggtggagattctgtgcgggctgttggcgtacaagatcatccgccgcgtcttcttcgccgactccgacgaccccgcgcacctcgccgacctcgattccgcccactccgacctctgcttcgccctcgcctccaggctcgagaagctctactccgcccgctgcttcgtcggcctccgcatccccgaccccgacgccggcgagcgccagcatgtcgacctcgtcctccttaccaacagggaggtcatggtagtggctatccacaacatttctggttttgttgaggtcgataaggatggcaactggacttgccccagtgataagaagaacaagcatggtgttatcccaaacccggtactgcaagtcaatagactggctgccaatcttcaatcgtacttggagaagaggggagcaaaactgcctgatggtcatataactggaaagattgtactgccaaatcccaactgcaggccttcctatgccatcactcttcaaccagaagttatcttgtacgatcaatggaaagatcttaaagcagattccaaaggtggactttcaacatggattaaaggtgcattcagtggaagcaaaggtgacatgcaagattcgttactccaaaatctacatttcattctcagcacgtcgcctatgtgggacaggttggaactcaaaggggacaggaatattcttggtgaattcattgaattcaaaggcaggcacgatgatattcaggccttgaaatgtctgaagagatcaaaagtttgccgattcatagtccagaaatcaactctgtttggaggttttggtcggtcaagagtgcaaatattgtattcaccacgagattatcgtgctgaaggaacttcatcctctgaatggaaagagatatcagtgaaacaatatacagaaattctttttcagccattgcactcgaaaaaagttaagaagttcaagctgtcaagtgttgcttctgtgacactgagtgcctag</cdnaseq>

Protein Sequence

<aaseq>MWVEILCGLLAYKIIRRVFFADSDDPAHLADLDSAHSDLCFALA SRLEKLYSARCFVGLRIPDPDAGERQHVDLVLLTNREVMVVAIHNISGFVEVDKDGNW TCPSDKKNKHGVIPNPVLQVNRLAANLQSYLEKRGAKLPDGHITGKIVLPNPNCRPSY AITLQPEVILYDQWKDLKADSKGGLSTWIKGAFSGSKGDMQDSLLQNLHFILSTSPMW DRLELKGDRNILGEFIEFKGRHDDIQALKCLKRSKVCRFIVQKSTLFGGFGRSRVQIL YSPRDYRAEGTSSSEWKEISVKQYTEILFQPLHSKKVKKFKLSSVASVTLSA</aaseq>

Gene Sequence

<dnaseqindica>2632..2813#2114..2259#1758..1946#1525..1640#723..837#331..432#126..262#attcctttcctcctgcgagtgcgagtgcgatccggggcaaggcaaatccgattccgagctcagaggcatcaggcgtcgagttcgtcgatcgatcgctgcagagaagcagagagagatcgagagagatgtgggtggagattctgtgcgggctgttggcgtacaagatcatccgccgcgtcttcttcgccgactccgacgaccccgcgcacctcgccgacctcgattccgcccactccgacctctgcttcgccctcgcctccaggttccgtctcccgccccctcccctaatcctcccccgatgccctaaatcccctatctccctccctccaggctcgagaagctctactccgcccgctgcttcgtcggcctccgcatccccgaccccgacgccggcgagcgccagcatgtcgacctcgtcctccttaccaacaggtacgtccttcctttcgtccccccgtcttccgccccattagtacctctaccctacatcccctgcttattacagatttcttcaattctatgtacggatttgtaccacctctctactgcacctcacaagttcacaacactagaatcgaccaatccacactggccttcactgtaatttgcataccgcactacaattcatggatcattaatgtgtgcgtttgtatcatccatgttcaattacttgtggggatattgctttgtgcaaccaacttctcaccttctttcctcaacagggaggtcatggtagtggctatccacaacatttctggttttgttgaggtcgataaggatggcaactggacttgccccagtgataagaagaacaagcatggtgttatcccaaacccggtatgtcatttatttccttcactgcctcattatgacccattgccattgcctcttgcagtaaggcaccatgtatattgcaactcttgttttcattcggtgctatactcttgggtgaaaaaacaaaaaacaaaggcaacatacataattaggctccgtttgacattttggtagattatggtcatcttgcttggtgcaacttcttttagacatttcagcgttcggcaaatttcttttctctcgatctttgttgcagatgataactattatgttccgaaaatttggaatagttgtgagaaacataacagttgatggcatatttttctaaccttaagtttatataattaaaaggaactgtaccgattataaatttccatttccacagcaacttcaaagtaagttataatgatgctaactgtcattggtcagtgaggcttacaacaaactctaacctgtgtacagattctgtcttgtgacgaaaactcttcatgttgaattcttctgtcagtaaactttatgctgcttagtcccttactcccttgctattattgtcttccaaaccataaacatatgtgcatatcaggtcggaatctgatttgggattttgagtgtttgagcgtgcacagttgatagcccttctcatgttgagcattttgttttgctaattgtttcttacattttgttctgtaggtactgcaagtcaatagactggctgccaatcttcaatcgtacttggagaagaggggagcaaaactgcctgatggtcatataactggaaagattgtactgccaaatcccaactgcaggttagttcttcatattgagctatgttctttgtgatcgtacttgcagaatttttctttctgttttttgtttgtctttttattttttaagttttaactatctaacaagtgctccaccaggccttcctatgccatcactcttcaaccagaagttatcttgtacgatcaatggaaagatcttaaagcagattccaaaggtggactttcaacatggattaaaggtgcattcagtggaagcaaaggtgacatgcaagattcgttactccaaaatctacatttcattctcagcacgtcgcctatgtgggacaggtaaagaacatggccatgaacacttaaagcgaacagccaagaagcaatctaaaatttattccgataatcgaatcgcagcctatcacagaacatccgttacctgttagttctgcacaaagatgtagaggctgaggtcaaacttttatagttgatatttccttgtgtaggttggaactcaaaggggacaggaatattcttggtgaattcattgaattcaaaggcaggcacgatgatattcaggccttgaaatgtctgaagagatcaaaagtttgccgattcatagtccagaaatcaactctgtttggaggttttggtaacttttctgcactgtaccttcttgttattctgtttgcgaagcactcctgtgaacgtacatgggtcgaataatactctaaggttgtcagaaaaatgcatttgtttcctggaagctatgctagtacaaaatgaaataagaaatgagaatagatcaactgatatgcacggaaattgcttattgatgtcttgcactaattcatatttgtaaaataaaaggtgatgtcttgcactaattcatatttgtaaaataaaaggtaaattatataattcagtagcagtagatgattctgttgtcataaataaatgagataattagcttgattgacttgctacatttaccttacctggtcgttttgttattgcattgcaggtcggtcaagagtgcaaatattgtattcaccacgagattatcgtgctgaaggaacttcatcctctgaatggaaagagatatcagtgaaacaatatacagaaattctttttcagccattgcactcgaaaaaagttaagaagttcaagctgtcaagtgttgcttctgtgacactgagtgcctagtgagttgaaattttatccacggggtacttcctgttgcagtagtatatagagtaccttcctggcttctgtatgtgctcctcagttaaagtttgtcttgttgtttctgtacaccaacctgtacttactttaagatgtcagttagcatgaaattagaaaaaaatgaatgatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0577000, RefSeq:Os10g0577000