BGIOSGA031967

From RiceWiki
Revision as of 04:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031967| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031967, complete gene.| tag = OS10G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031967

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031967, complete gene.

LocusTag

OS10G0400800

Ensembl Transcript ID

BGIOSGA031967-TA

Ensembl Protein ID

BGIOSGA031967-PA

Length

4319

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11939664..11943982

Sequence Coding Region

11943830..11943982,11943617..11943739,11943415..11943513,11943093..11943149,11942741..11942796
,11942552..11942644,11942134..11942224,11942017..11942054,11941904..11941942
,11941695..11941771,11941543..11941627,11941378..11941477,11941120..11941216
,11940939..11941010,11940290..11940356,11940066..11940191,11939797..11939851
,11939664..11939717

Genome Context

<gbrowseImage1> name=IndicaChromosome10:11939664..11943982 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:11939664..11943982 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGATGTGGAGGCCTGCCTCCTCGCCCACCTCAACTCCGGCGGCGAGGTGCCGGACTCCCGCTCCTACGCCTCCTCCCTCCGCGTCACCCACGACGAGCTCGAGGCCGTCATCAAGAGCCTCTCGGCTTTCCGCATTGTCGACACCACGGACATCACCAAGGAGACGTGGGTGCTAACCGATGAAGCTAAGGGGTACGTCGCGGGTGGCTCCCCCGAAGCGCAGCTCGTCGCTGCAATCCCACCGGAGGGTGCCTCCAAGGACGTGCTCAGGGAGAAATTGGGATCTGTCTTTGACATCGGCATGAAGACGGCTGCGAAGAACAAGTGGATTGGTTTTGAGAAAGGGAATAAGGACTTGGTGTTGAGAAAGGTTAACACCATCAAGGATGACTTGCAAGAGCAACTGAAAAGTCTAGAGAGTGGAGAGGTTCTTTCTGACAAGGTGATTGATGATTTGAAAAGAAGAAAGCTTATCACAAAAGAGAAATCAATTTGGTATGCCCTAAAGAAAGGACCCCAGTTTGTCGCAAAGAGGAAAAAACTGGCAACTGATGTGACACAAGAGCATCTCAGAAGTGGTGATTGGAAGGATCTTGAATTCAAAGACTATAACTTTGGAGCCCAGGGACAACCTATTGCCATTGGTTATGTGCAACCTTTGTTGGAGGTGCGAGAGGAAATCCAGAACATCTTTCTTCAGATGGGGTTCACTGAGATGCCAACTAACAATTACGTTGAGAGCAGCTTCTGGAACTTCGATGCACTGTTCCAGCCCCAACAGCATCCTGCTCGGGATTCACACGATACATTTTTTCTTGAAGCCCCTGCCGCTACAAAACAATTGCCTGAAGATTATCTTGAGAAAGTAAAGGAAGTTCATCAACGTGGTGGTTATGGCTCCAAGGGATATGGCTATGACTGGAAACGGGATGAAGCAGAGAAAAACCTGCTTCGTACCCACACTACAGCAGTTTCAACAAGGATGCTATACAAGCTAGCACAAGAGAAACCTTTTGCCCCTAAGAGGTACTACTCCATTGATCGTGTTTTCCGCAATGAAGCTGTGGACCGGACTCATCTTGCGGAATTCCACCAGATTGAAGGTCTCATTTGTGATTATGGTTTGACGCTGGGTGATCTGATTGGTGTATTGGAGGATTTCTTCTCGAGTCTAGGCATGTCAAAGCTGCGTTTCAAGCCTGCCTACAATCCATACACCGAGCCGAGCATGGAAATTTTCAGTTACCATGAAGGTTTGAAGAAATGGGTGGAAGTTGGTAACTCTGGCATGTTCAGACCTGAAATGTTACTTCCCATGGGACTGCCAGAGGGTGTTAATGTTATTGCATGGGGTCTTTCACTAGAAAGGCCAACAATGATTCTTTACGGCATCGACAACATTCGAGACCTCTTTGGACCAAAGGTTGATTTCAACCTCATCAAGAGCAACCCTCTCTGCCGCTTGGGACTGCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MADVEACLLAHLNSGGEVPDSRSYASSLRVTHDELEAVIKSLSAFRIVDTTDITKETWVLTDEAKGYVAGGSPEAQLVAAIPPEGASKDVLREKLGSVFDIGMKTAAKNKWIGFEKGNKDLVLRKVNTIKDDLQEQLKSLESGEVLSDKVIDDLKRRKLITKEKSIWYALKKGPQFVAKRKKLATDVTQEHLRSGDWKDLEFKDYNFGAQGQPIAIGYVQPLLEVREEIQNIFLQMGFTEMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLEAPAATKQLPEDYLEKVKEVHQRGGYGSKGYGYDWKRDEAEKNLLRTHTTAVSTRMLYKLAQEKPFAPKRYYSIDRVFRNEAVDRTHLAEFHQIEGLICDYGLTLGDLIGVLEDFFSSLGMSKLRFKPAYNPYTEPSMEIFSYHEGLKKWVEVGNSGMFRPEMLLPMGLPEGVNVIAWGLSLERPTMILYGIDNIRDLFGPKVDFNLIKSNPLCRLGLQ</aaseq>

Gene Sequence

<dnaseqindica>1..153#244..366#470..568#834..890#1187..1242#1339..1431#1759..1849#1929..1966#2041..2079#2212..2288#2356..2440#2506..2605#2767..2863#2973..3044#3627..3693#3792..3917#4132..4186#4266..4319#ATGGCGGATGTGGAGGCCTGCCTCCTCGCCCACCTCAACTCCGGCGGCGAGGTGCCGGACTCCCGCTCCTACGCCTCCTCCCTCCGCGTCACCCACGACGAGCTCGAGGCCGTCATCAAGAGCCTCTCGGCTTTCCGCATTGTCGACACCACGGTACTCCTCCTCCCCTCCCCTCCCCTCGCATCTCCATCTCCGAATTTATCCCCGGGCCTCCCGAACCCTAACGAGCTATCTGCCCCGCAGGACATCACCAAGGAGACGTGGGTGCTAACCGATGAAGCTAAGGGGTACGTCGCGGGTGGCTCCCCCGAAGCGCAGCTCGTCGCTGCAATCCCACCGGAGGGTGCCTCCAAGGACGTGCTCAGGGTGAGATATATTCTGTTTTTTTTTTCCTAGGATTTTTTTTTATGTTTAGCTGGATTGACTAGCTTTGGTACAATGCTGACGCTTGTATTCGTGCCCATTTTAGGAGAAATTGGGATCTGTCTTTGACATCGGCATGAAGACGGCTGCGAAGAACAAGTGGATTGGTTTTGAGAAAGGGAATAAGGACTTGGTGTTGAGAAAGGTAATTTAAGCTGAGCTCAATGTGCAGCTCGATTGGGAGATTTGTCCTTCTTCTTATTGTTATTGTTCTTTGGGTGAAATGCGTTCCAATTTTGCCAATTTGTCAGTTCTTTGCCACAGAGGTAGAAATCGGCTGAACCTAACTATTTTGATATGCAGTTGTAGATCCGTGTTTACTCTAGGTCTGTTGGGAATGCATTTTAAGTGTGCTCCTGTTCTTTTATATATCTGTGGGCATGATAACTGATGTTTTGCTCCTTATTAAGGTTAACACCATCAAGGATGACTTGCAAGAGCAACTGAAAAGTCTAGAGAGTGGAGAGGTTTGTGTTGCTCGTCACTCTTATGTTTCATCTCACAATTTGCATTTTCATTGGAAACATTCACTGAATTGTGTATTGGCATAATATGAATGGTTTCGATGTTGCTTGTTGCTCATTATCCATCACACAGTTTTCATTATAAATATCACAAACAATTCTTAGGTGCCTAAGATCGTTGACTGGTTTTTATCGGTGCATAGGAGCCCATTTACCTCCACTGTTCCACAAAATATTGTGTGTTAATCTGATACGCATTTTAGTGTGCATCCTTTTAAGAATAAAACTTTTTTATGTAGGTTCTTTCTGACAAGGTGATTGATGATTTGAAAAGAAGAAAGCTTATCACAAAAGAGTAAGTGCCTCTTATTTGAACAAGCACAATCATTTTTTTTGTGCTGTATATTGCAATTATTTAACTAATGTTTACATCTCCTTTAATGTCCTACAGGAAATCAATTTGGTATGCCCTAAAGAAAGGACCCCAGTTTGTCGCAAAGAGGAAAAAACTGGCAACTGATGTGACACAAGAGCATCTCAGAAGGTATTTGTGCCACTTCTCAAGATGGTTCCTTAAATTGTGCAGGACATGTTGCTGGTTGATTATATGATCTAACTCTGACATATCATGAACACCCATCTAAATAGAAACCAACCGCTCCAGATTGCCTTTTGGATTACCTGATCATTAGCTGTTAGTCTGTTACTTCATCCTATCAAAGTTTTCTTGCATCAGTATTGAACTATTTCATGTATGATATTGCTGTGAATTGTTTGTCTTTGAATATTCATATGCATATGGAATGTTTTGTATGCTTCGTCTTCACAACTTTTGGAAATTTCATTTCGAATTGTATTTTCTGTCTTGAAGTGGTGATTGGAAGGATCTTGAATTCAAAGACTATAACTTTGGAGCCCAGGGACAACCTATTGCCATTGGTTATGTGCAACCTTTGTTGGAGGTGGTTTTTGTAGCTCCAGCTCTTTGTATAGCATTTCTGATAGCTAAATATAACTTGAAACTAATGGTGTTTGATTCAGGTGCGAGAGGAAATCCAGAACATCTTTCTTCAGATGGGGTACAGTAAAATAGTTTTTCGTTACTTTCACTTAGTATGGGAAAATTAATTAATTCATTGTATCTATGAAACAGGTTCACTGAGATGCCAACTAACAATTACGTTGAGAGCAGGTGTGTTATAATGTTTATGCTCCACAAAATGGGCATAGTACACTCTCCGTACTCTGAAGTGGTCTGGTTGTTCCAGTTGATAATGATGTGTAAATAAAATAATATTAAAAGCGATTGCTATTTCTTTGTTAGCTTCTGGAACTTCGATGCACTGTTCCAGCCCCAACAGCATCCTGCTCGGGATTCACACGATACATTTTTTCTTGAAGGTAAAGGTCCTGTCAGTCTTAAGATCAAAGCTGTATGTACACTATATTAATTGTTCAAGTTCTGCAGCCCCTGCCGCTACAAAACAATTGCCTGAAGATTATCTTGAGAAAGTAAAGGAAGTTCATCAACGTGGTGGTTATGGCTCCAAGGGGTATGCTCTGGTGTATATTGTGCAGCCTAACGAAAAAATTTATAATACAATATAGCCTTTTGCAGATATGGCTATGACTGGAAACGGGATGAAGCAGAGAAAAACCTGCTTCGTACCCACACTACAGCAGTTTCAACAAGGATGCTATACAAGCTAGCACAAGAGGTAAAGTAACTGACTGATGGTCCTTTTTCAGTTTATAGTTCTACATTAAGTTTTATAATCTTAGTTTAATTATACCAGTGATTGTGATATCAATTTGTTTTTATGTTCTCTTGAATGATTCATGAGGTTTATTTTCTTCAATAATTACCATGAACTTTCAGAAACCTTTTGCCCCTAAGAGGTACTACTCCATTGATCGTGTTTTCCGCAATGAAGCTGTGGACCGGACTCATCTTGCGGAATTCCACCAGATTGAAGGTGTGTTCTTGTTTCTTGCCTATGTTTTGTTCTGTTGATTGAAATCTGGTCCATATCTTGGATATCATGTGGACACAGTGAGGAAGCTACTTACAGTTCCTTCTTTCAGGTCTCATTTGTGATTATGGTTTGACGCTGGGTGATCTGATTGGTGTATTGGAGGATTTCTTCTCGAGTCTAGGTGCTCAAACTTCAACTGTCATAATAATGATGTATCTTGGTTAAGTTTTTTAAATAATATACAAGAACTTCCTATTCAACAAATTAACCCACGGGTGCACATTCAGTAAGATGACTAATTTAGGCCGTGTCTAAACACTACTAAGAGGGCGGAGCCATATAGTGCATTTGTACACAAGTCTTCGAAAATTTGCTGTTGATTTGCCACCATGGTGATAACTGTTGCTTGAGTGATGCCTTGTTCATGGGTGCTTGTATTGATCTGAATAATGCTACATTTCTGGTGTAAAACCACGCACTAATGCAGACTTTGCTGGTTAATGATAAATGATGCTGTGCTTTATACATGGGAACACAAGAGAACCATTATATTTTTTTGCCTATTGCATCATCTCTATTTAGATTGTGTATTGCCAAGATAAATACTGTATTTCATTATGTATGTTGCCTACTTTTACACAACTCTAGGCATTCAGTCATTCACATGCTATACAATTGAACTTCCTTTATATGCCTATATTCTCTCTTGTCCTTTCTAAATTCAGCAGTCCTTTTTAAATTGGAAAATTTGTCTGCCTTTTAGGCATGTCAAAGCTGCGTTTCAAGCCTGCCTACAATCCATACACCGAGCCGAGCATGGAAATTTTCAGGTGACAGCTTTGATTGCTGGCTTCATGATTCTTCTAGTTCATGAATGAACTTTTTTTCACAATGTGTTTATAAACCATTCTTGTGTTTCTTTTTTCAGTTACCATGAAGGTTTGAAGAAATGGGTGGAAGTTGGTAACTCTGGCATGTTCAGACCTGAAATGTTACTTCCCATGGGACTGCCAGAGGGTGTTAATGTTATTGCATGGGGTCTTTCACTAGAAAGGTATAATTGAGATAAGCTCGAAGTGAGGTTTTTCTTATTTACATTTACCTGTTAATTTTGGCCTATTGTCAAAATCCTCTCTTTGGAATTCTTGTTTTTTTCATAAACAGTAACAATAAAACAAATCTTATACTAATTGAAGTGTATGCAATCCTTATTTTTGGCTGGACTAACAATTTTAAGAAATTTGTTCTGACTATACTGTTTTGACTAGGCCAACAATGATTCTTTACGGCATCGACAACATTCGAGACCTCTTTGGACCAAAGGTATTGTGCTACTAATATGCAGAGCTTTCTCCCGTTAACATGATCTTTTGTTCTCATTTTCTGATTTGTTTTTTTCCAGGTTGATTTCAACCTCATCAAGAGCAACCCTCTCTGCCGCTTGGGACTGCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031967