Os10g0577700

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Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0577700| Description = CS domain containing protein| Version = NM_001072025.1 GI:115483645 GeneID:4349500| Length = 2856 bp| Definition = ...")
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Gene Name

Os10g0577700

Description

CS domain containing protein

Version

NM_001072025.1 GI:115483645 GeneID:4349500

Length

2856 bp

Definition

Oryza sativa Japonica Group Os10g0577700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23487496..23490351

Sequence Coding Region

23487581..23487791,23488256..23488448,23488525..23488719,23488974..23489035,23489165..23489231
,23489316..23489434,23489578..23489754,23489912..23490015

Expression

GEO Profiles:Os10g0577700

Genome Context

<gbrowseImage1> name=NC_008403:23487496..23490351 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23487496..23490351 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttggcctccacttgcttctccgccccgccgccctcctcctcctccccgtcaatcccgacccacctcgccactctctgctgctgcttcaggcctcccgctcgcccaccttggcctcgctctcttcttcttcttggtgccttcccaccgccgacccgccccctcccccgcgcctccgtctcgtcatcgaccgccccagcgaaagactacgagtttactgatggtggcggagaggtggagctgaggctggacataggaaagctcggcattgagaattcaagagatgtatttgttgacgtcgatgatacgtctctgttggtcagagccaagtcggatgggacactgcggactttgatcaatgttaaacaactctttgataggattaagtcttctgagactatatggttcattgatgaggatcaattggtagtgaatctaaagaaagttgagcaagagctgaaatggcccgacattgatgaatcttgggaatcccttacttctggaatcactcagcttttgacagggattagtgttcatattgttggtgattccacagatataaacgaggcagttgctaaagaaatagctgagggaattggttaccttccagtctgcacaagtgagctgctagaaagtgccaccgaaaagtctattgacaaatggttggcttcggaaggagtggattcggtagcagaagctgaatgtgttgtgctggaaagccttagcagccatgttcgtacagtcgtagcaactctggggggaaagcaaggagcagctagcagatttgataaatggcagtatcttcatgctggatttacggtttggttgtcggtctccgatgccagcgatgaagcttctgccaaagaagaggcccgtagaagtgtgagctcgggaaatgttgcgtacgcgaaagctgatgtagtagtgaagcttggtggatgggatccggagtacacacgagctgttgcccagggttgccttgtggccttgaagcagctaacattggcagacaagaagctagcaggtaagaagagcctatacatgaggctgggatgccgaggggattggcccaacatcgagcctcccggctgggatcctgactccgacgcaccacccaccaacatatga</cdnaseq>

Protein Sequence

<aaseq>MLASTCFSAPPPSSSSPSIPTHLATLCCCFRPPARPPWPRSLLL LGAFPPPTRPLPRASVSSSTAPAKDYEFTDGGGEVELRLDIGKLGIENSRDVFVDVDD TSLLVRAKSDGTLRTLINVKQLFDRIKSSETIWFIDEDQLVVNLKKVEQELKWPDIDE SWESLTSGITQLLTGISVHIVGDSTDINEAVAKEIAEGIGYLPVCTSELLESATEKSI DKWLASEGVDSVAEAECVVLESLSSHVRTVVATLGGKQGAASRFDKWQYLHAGFTVWL SVSDASDEASAKEEARRSVSSGNVAYAKADVVVKLGGWDPEYTRAVAQGCLVALKQLT LADKKLAGKKSLYMRLGCRGDWPNIEPPGWDPDSDAPPTNI</aaseq>

Gene Sequence

<dnaseqindica>86..296#761..953#1030..1224#1479..1540#1670..1736#1821..1939#2083..2259#2417..2520#ggagtcatcttcttcctcctgcggtggcggtgctgcagctgagcctgctgcactcctcaccggctgctgattgtgactgtgagtcatgttggcctccacttgcttctccgccccgccgccctcctcctcctccccgtcaatcccgacccacctcgccactctctgctgctgcttcaggcctcccgctcgcccaccttggcctcgctctcttcttcttcttggtgccttcccaccgccgacccgccccctcccccgcgcctccgtctcgtcatcgaccgccccagcgaaagactacgaggcaagcaaagcaacctgctcttctctccacatactagtatttcatcttcttgcttgcttgctcttctgctgtttagtttatctatctacgcgggtcacagtctctgtccgttaaatcctaaacccaattaagcagcaatggagtttttttaactcactgaccctgaaacccaattaggcaatcaggaatttgggatccttgcaccgctaaactttggtaccgtttatatagcataacatatggggattgttttggaagataatgtgcaacaatatatcaatatgcctgtctttcatcccctgtaattcacaaggtctgttacgtgtgttacgtgcctactcctatgagctgtattttacagcttttagggttttttttataatataatgatgttgggtaaggtaaataatactcctactcccactcatgttgtcaaaaataatcagctgctcttgtttgtctagtttactgatggtggcggagaggtggagctgaggctggacataggaaagctcggcattgagaattcaagagatgtatttgttgacgtcgatgatacgtctctgttggtcagagccaagtcggatgggacactgcggactttgatcaatgttaaacaactctttgataggattaagtcttctgagactatatggtatgcaccagtcatttactagcttgctcttgtagaggttttaagaaagttgaccaattctatgttcatcttgcaggttcattgatgaggatcaattggtagtgaatctaaagaaagttgagcaagagctgaaatggcccgacattgatgaatcttgggaatcccttacttctggaatcactcagcttttgacagggattagtgttcatattgttggtgattccacagatataaacgaggcagttgctaaagaaatagctgagggaattgggtatgtgcatctcatttcttaatgattcaaactgcaatttgaattctgccattctggtttcttttcaaccttctagtttatactatacaagtgcaaatggtagttcattagaatgagatttatatagttacatactgagtatagatcaggtatccttttacaatatttgctaccatgcatgaacatatacaattcattgctagtttatcgcatataaggcccctgaaatatatttgctggttgtacctttgcagttaccttccagtctgcacaagtgagctgctagaaagtgccaccgaaaagtctattgacaaatgtaaaaattatcgcctcatttctgttgataaaagttgcaacaaccatgttgttttacaggcatcagaagttgttatgtgtagttcatactgttacagtgaattgacaaaagtgctgttatttcttgtagggttggcttcggaaggagtggattcggtagcagaagctgaatgtgttgtgctggaaagccttagcaggttgcttttgtgggctactcctagtttgttacctttggttgatgtcttgctcagtatgcttaaaagactatttctccctcgcagccatgttcgtacagtcgtagcaactctggggggaaagcaaggagcagctagcagatttgataaatggcagtatcttcatgctggatttacggtttggttgtcggtctccgatgccagcggtaaggaaactaggaaaggaaggctagcattgttctgttcctagtacactactactatatatgtacataatgaagtccattaatctccagaggttactactcctagttactttacctttgatgaggatgtcatatgtacatagatgaagcttctgccaaagaagaggcccgtagaagtgtgagctcgggaaatgttgcgtacgcgaaagctgatgtagtagtgaagcttggtggatgggatccggagtacacacgagctgttgcccagggttgccttgtggccttgaagcagctaacattggcagacaagaagctagcaggtgaagtatctatcatccaattagctagctagccttgttatttgttaccaaaaaattgaattaaaatcatcttaaattagataaaacttggcaatgataataagagtgatgacatgaaatgtaaaactaacacactagttagtttggatggtgacaggtaagaagagcctatacatgaggctgggatgccgaggggattggcccaacatcgagcctcccggctgggatcctgactccgacgcaccacccaccaacatatgattttcatactcagtactcactagtagtagtatatatacagtacatgattctcattctagcctcttcgtcgtcgcttttcttctctctggaggcgcttcagttccatggaatccacattcacggggcatttcccagattcagctttagctgtgtcatggcatcttttctttgcagccagctactacacgagattcttactgctagtaaaatactcttgtgttactacagtttgaaactttcgtgccactattttttaagctgtgccaaaactgccagatctcatggcaaatataaaccataacaaaaccttgcttcagctatgcatggttcatggag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0577700, RefSeq:Os10g0577700