BGIOSGA031978

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Revision as of 04:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031978| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031978, complete gene.| tag = OsI_334...")
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Gene Name

BGIOSGA031978

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031978, complete gene.

LocusTag

OsI_33465

Ensembl Transcript ID

BGIOSGA031978-TA

Ensembl Protein ID

BGIOSGA031978-PA

Length

4233

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11747890..11752122

Sequence Coding Region

11751063..11752122,11748867..11749282,11747890..11748609

Genome Context

<gbrowseImage1> name=IndicaChromosome10:11747890..11752122 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:11747890..11752122 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCTGCGAGCAACGGGGAGGAAACCCCTAGCTCATCCATGGCACCAACTGCTTTGCCCATCGCCGCCAAACTGATGGTGGCCACAGACCGTGGTGAATGTGAGCGGCTGAAGGATATAGTGAGCAAGGAAGATACTACGACCATGGTGGTGGCGTTGGGCTCAAGCAGAGAGGCTTCTGCGGCGGCAATGGCGTTGAAGAACGCAGCTGCAGAGGAACGCGCTAGCTCGTCCACAGGGGCAATGGATGCCAAGGTGCTGATAGCAACAAGCCCAAGTGACTGTGAGTCGTTGAAGGATACGCTCAGCGTGGAAGATGCAGCAGCCATGTTGGTGGTGATGACCTCGAGAAAAGACGTCGCCACCAAGCCGTCCATGAATCCCCTGTTGCTGTCGCTGGCATCGCGAGGTGAGTGTGCTACGCTAGACCAAATTCTCAACATGCTAGGTGTACCTGCGCCTCCTCAAGGGCTTGAGCCAACACTGCCAACACAGCAAGCTACTGGCGCTCTAGCTTCTGCAGAGCCGGGCATGGACCTGAATGGGGTCACCATTGAAGGGGACACCGCACTCCACGTTGTGGCCACCTGTGGTGAAGACAGGTTCTACTTGAAATGTGCCAAGAACATCTACAACAAGGCCAAACATCTCCTGTTTGCGGAGAACAACAAGGGTGACACGCCTTTGCACTGCGCTGTCAGGGCTGGCAATGCTGAAATGGTTTCTTGTCTAATTGGTCTGGCTAAATCCGAGGATAACTCTGGTAGCAGCTCGAGACTAAAGGAATTTCTGAGAAAGGAAAACTGCAGTAAGGAGACGGCCTTGCATGAAGCAGTCCGCGTTGGAAATAAGAATATAATAACTAAGCTTTTTGAATTTGATTCAGAATTGGCCAGATATCCTAGAGATGGAACTGGAACCTCGCCGTTGTACCTAGCTGTCTTACTAGAACGTGTGGACATAGCAAGAAAATTGCATGAATTGAGTAAAGGGCGTCTTTCGTACTCTGGCCCGAATAGGCAAAACGCATTGCACGCAGCGGTTCTCCAAGGCAAAGAGATGACCGAAATGTTACTGAATTGGAACACAGACCTCACAAAACAAGCGGACCAAAATGGAAGCACGCCACTTCACTTCGCTGCATCACTTTTTTGGGGAGGGAATCTAAAGCAATGGAAGTCGAAAACTCCACTCATTCATGTGCTAAAAGCCAACCCAATTCAGCTGTACCAGCCAGATTCTGAAGGATTTTACCCTATACATGTCGCTGCCTCCTCGGGTGCCAAAACGGCATTCACCTATTTTATTAAGGAGCGACCTGAGATCGCTGGTTTCCGCGATTCTAAGGGGAGGACTTTCCTTCATGTTGCTGCTGAGAGCAACACATGGGATATAGTTGCGTACACTTGCAGTACTCCATCGTTAGCCTGGATTTTGAATTTGCAAGACAACGATGGCAACACAGCTATGCATAACATAGATAAGCTGATATTGCGAGCACTAATGATTTGCAACGCAAGCTATGGTAATCTTCGGGTAGATCACTTGAAAGAACAAGTTCTCCGTCAAAGGAAAAAGTTGGATAAAGTGAGGGAATCAGAAAAACTGACTGATTCAACACAAACCCTGGGCATTGGGTCGGTACTTATTGTTACTGTCACATTTGGCGCATTGTTCGCCATACCAGGAGGTTATAAAGCCGATGATCACTACAATGGCGGCACACCAACACTTGCTAGAAGGTATATATTTGATGCTTTCATCATGGCCGACACAATTGCATTCATTTGCTCTGTCTTAGCCACCATCAACCTCATGTACTCCGGAATGGCTATGGTTAGTTTGGCCCTCCGTTATTGGCACTTCAACACATCTTTATTCCTGGCCTACAGCTCAGTGACAAGTTTGGGTGCTGCTTTTACGCTAGGTATGTATTTGGTGCTAGCCCCAGTGGCTCGATGGACTGCAATTGCAATCTGTGTAATGATGATGATTGCATCTACATGCTTATTCACGGAGCCATTGAATGCATTCCGTGTTGCAATAGCGCTGTATGTTAGGAAGGGGAATCGGGTATTGCCAGTTATTGCACGAGTTCTCCTTTTTCGAACGTTGATTACTTATTGGCCCTGTGCGGTAATCTTCGGCTGGGCAGCGATTTCGACAAAATATGGGCATGGAAGACATGGATGA</cdnaseq>

Protein Sequence

<aaseq>MAAASNGEETPSSSMAPTALPIAAKLMVATDRGECERLKDIVSKEDTTTMVVALGSSREASAAAMALKNAAAEERASSSTGAMDAKVLIATSPSDCESLKDTLSVEDAAAMLVVMTSRKDVATKPSMNPLLLSLASRGECATLDQILNMLGVPAPPQGLEPTLPTQQATGALASAEPGMDLNGVTIEGDTALHVVATCGEDRFYLKCAKNIYNKAKHLLFAENNKGDTPLHCAVRAGNAEMVSCLIGLAKSEDNSGSSSRLKEFLRKENCSKETALHEAVRVGNKNIITKLFEFDSELARYPRDGTGTSPLYLAVLLERVDIARKLHELSKGRLSYSGPNRQNALHAAVLQGKEMTEMLLNWNTDLTKQADQNGSTPLHFAASLFWGGNLKQWKSKTPLIHVLKANPIQLYQPDSEGFYPIHVAASSGAKTAFTYFIKERPEIAGFRDSKGRTFLHVAAESNTWDIVAYTCSTPSLAWILNLQDNDGNTAMHNIDKLILRALMICNASYGNLRVDHLKEQVLRQRKKLDKVRESEKLTDSTQTLGIGSVLIVTVTFGALFAIPGGYKADDHYNGGTPTLARRYIFDAFIMADTIAFICSVLATINLMYSGMAMVSLALRYWHFNTSLFLAYSSVTSLGAAFTLGMYLVLAPVARWTAIAICVMMMIASTCLFTEPLNAFRVAIALYVRKGNRVLPVIARVLLFRTLITYWPCAVIFGWAAISTKYGHGRHG</aaseq>

Gene Sequence

<dnaseqindica>1..1060#2841..3256#3514..4233#ATGGCTGCTGCGAGCAACGGGGAGGAAACCCCTAGCTCATCCATGGCACCAACTGCTTTGCCCATCGCCGCCAAACTGATGGTGGCCACAGACCGTGGTGAATGTGAGCGGCTGAAGGATATAGTGAGCAAGGAAGATACTACGACCATGGTGGTGGCGTTGGGCTCAAGCAGAGAGGCTTCTGCGGCGGCAATGGCGTTGAAGAACGCAGCTGCAGAGGAACGCGCTAGCTCGTCCACAGGGGCAATGGATGCCAAGGTGCTGATAGCAACAAGCCCAAGTGACTGTGAGTCGTTGAAGGATACGCTCAGCGTGGAAGATGCAGCAGCCATGTTGGTGGTGATGACCTCGAGAAAAGACGTCGCCACCAAGCCGTCCATGAATCCCCTGTTGCTGTCGCTGGCATCGCGAGGTGAGTGTGCTACGCTAGACCAAATTCTCAACATGCTAGGTGTACCTGCGCCTCCTCAAGGGCTTGAGCCAACACTGCCAACACAGCAAGCTACTGGCGCTCTAGCTTCTGCAGAGCCGGGCATGGACCTGAATGGGGTCACCATTGAAGGGGACACCGCACTCCACGTTGTGGCCACCTGTGGTGAAGACAGGTTCTACTTGAAATGTGCCAAGAACATCTACAACAAGGCCAAACATCTCCTGTTTGCGGAGAACAACAAGGGTGACACGCCTTTGCACTGCGCTGTCAGGGCTGGCAATGCTGAAATGGTTTCTTGTCTAATTGGTCTGGCTAAATCCGAGGATAACTCTGGTAGCAGCTCGAGACTAAAGGAATTTCTGAGAAAGGAAAACTGCAGTAAGGAGACGGCCTTGCATGAAGCAGTCCGCGTTGGAAATAAGAATATAATAACTAAGCTTTTTGAATTTGATTCAGAATTGGCCAGATATCCTAGAGATGGAACTGGAACCTCGCCGTTGTACCTAGCTGTCTTACTAGAACGTGTGGACATAGCAAGAAAATTGCATGAATTGAGTAAAGGGCGTCTTTCGTACTCTGGCCCGAATAGGCAAAACGCATTGCACGCAGCGGTTCTCCAAGGCAAAGGTACGACTGCAACTTAATTTTGTTAATTTAGTCAATCTTATTTTATCTTCCCACTTATTTACCCAAATATGGTGATATCTAAATAGTATATAATAATCCACAAATATTTACTTATACAAATTTGAGGATTTCTTAAGAACCACCACATTAATCCTAAGAGAGAAAAAAAATAACTAGAAAGTACCACATTAATAAAAAATCATATGCATTCTTTTATCATATATACGGACCATATTTTTACCACATACTATGTGTTTTTATTAAATTCGGATGTAATAACTACCAAACATATTTGGTTTCTAAAATTCAGAATAAACAAATGTAGAGTTCTACTTGGTCAGCTAGAGTCTAAATTATGAGATTTGCTTCGGTACAGCAAAATGTATCTCGAGGTACCGATACCTCACGGCACTAAGCCATTTCCAATCGTTAGATCTAGCTAGACAAGATGGGCATTGTTAGATCCAACGATCCGAAACAATTTAGTACCAGATACCGGTACCTCGAGATACTTTTTGTTGGACCGGAGCAAATATCCTAAATTATAGCTTTTTTATGACTTAACAATTTCAAAATTCAGAATTAACATATACCAACTACAATCTCATTCATAGTTTATTTAATGATTTAGTAATTAAAAATTTGTAAATTAATACAAAATAATAATCAATTAATAAATATTGAGTTGTAGTATCAAGTCTTGATTAGGTGTCATTATGAATTAATAATTTCGAAATTTGAAATTAATAATACCAAGATGTGCTTTGATCAAGTATCTGTAATTTTGTGAAATTTACTCTTTTGTTTATTCTAAATCTCCTGCAACTGACGGTCCATATATAATGAGTTTCCATATAGCATCTTTCGACGGAAATTGGAGCCAAAAACTGTCAGTTTTTTTCCGCCGTAGGATACATGCACAACGGCCAGGATCAGCAGGTCTCTATGCACGTGCTGTTTTTGAACTGTGCAGCCCGATTAAATGATTATCTAAGCAACTGTGTACTGTTATTCTACTTTACCAAAATTAATGGTAGGATTAACAAAAAAAATTATTAATCATAAAAACCATTAACTTGCAAATTACTATGTCAAACAAGCTTACTAGAAAACATAACTAATTTATTTGCCATTTGAAAATTGAAAATAAAAATTACAAACAAATCTACTCAAAGTTACATCGTAACTACACTATATTTACAATGTGACTAACATGTAACTATAATGTTACTACATTGTAACTTTTATAGTTACACCAAAATTATACTGTAATTTTCTCTTTTGGTGTTATCTCTGATTCTCTGTGTATAGTCGTCTAGTCACTCAAGTATTGGCTTGTTAGGCAGCGAAAAATCATCACGGTGGATTAAGTAGAGAATACAATGCTCCAGAAGTCCAGAGTACATATCACTGAGATGGAGGTAGAGCTTTAATGATTGCCGTGTGAAACGTGATGAGTTTAACTACTCTACATATACAGAGAGCAAACAAATGCACGAATCGCAACGTCATATCTAAGTAATCTAACGAACGAGAAAACGACAGATTTTTTTGGCAAAAATCTGTCGACAAATTTCTAGCAGATCCGATGTATATATTGGTTTTAGTGTGTTAATTTACACAAGTAGGTTCCTTTGTGTGTGTATCTCTCTTTCTTCTTTGCAGTTTAAAGTGAACCTCCACAACCTTATGTTTAGTTTGGTCTTCATAGCAATTTTTTATTACTGCAAAGTTTTCTCTCCTTTAATTACTTAGTATGACTTGAACACCACATGTGCAGAGATGACCGAAATGTTACTGAATTGGAACACAGACCTCACAAAACAAGCGGACCAAAATGGAAGCACGCCACTTCACTTCGCTGCATCACTTTTTTGGGGAGGGAATCTAAAGCAATGGAAGTCGAAAACTCCACTCATTCATGTGCTAAAAGCCAACCCAATTCAGCTGTACCAGCCAGATTCTGAAGGATTTTACCCTATACATGTCGCTGCCTCCTCGGGTGCCAAAACGGCATTCACCTATTTTATTAAGGAGCGACCTGAGATCGCTGGTTTCCGCGATTCTAAGGGGAGGACTTTCCTTCATGTTGCTGCTGAGAGCAACACATGGGATATAGTTGCGTACACTTGCAGTACTCCATCGTTAGCCTGGATTTTGAATTTGCAAGACAACGATGGCAACACAGCTATGCATGTGGCAGTTCAACATCGGTATAAGTACACATTTGGTTCTTTATTCAAAGAACGAAGGAAGTAGACTTAAATATACCAAATCATAAGGGGCAAACTCCTTTAGATATATCATGCAGCAAAATTCCAGAAGGATTTTTCTATGGATGGGTAATACTCTTTCCACTCTTATCGCATTATAACTTGTTCTTTTGTAGAAACCAAGAAAAATAAATAGTACCATACTGAGTTACTGATCCTTATATTCATTTGCCTTCGCAGAACATAGATAAGCTGATATTGCGAGCACTAATGATTTGCAACGCAAGCTATGGTAATCTTCGGGTAGATCACTTGAAAGAACAAGTTCTCCGTCAAAGGAAAAAGTTGGATAAAGTGAGGGAATCAGAAAAACTGACTGATTCAACACAAACCCTGGGCATTGGGTCGGTACTTATTGTTACTGTCACATTTGGCGCATTGTTCGCCATACCAGGAGGTTATAAAGCCGATGATCACTACAATGGCGGCACACCAACACTTGCTAGAAGGTATATATTTGATGCTTTCATCATGGCCGACACAATTGCATTCATTTGCTCTGTCTTAGCCACCATCAACCTCATGTACTCCGGAATGGCTATGGTTAGTTTGGCCCTCCGTTATTGGCACTTCAACACATCTTTATTCCTGGCCTACAGCTCAGTGACAAGTTTGGGTGCTGCTTTTACGCTAGGTATGTATTTGGTGCTAGCCCCAGTGGCTCGATGGACTGCAATTGCAATCTGTGTAATGATGATGATTGCATCTACATGCTTATTCACGGAGCCATTGAATGCATTCCGTGTTGCAATAGCGCTGTATGTTAGGAAGGGGAATCGGGTATTGCCAGTTATTGCACGAGTTCTCCTTTTTCGAACGTTGATTACTTATTGGCCCTGTGCGGTAATCTTCGGCTGGGCAGCGATTTCGACAAAATATGGGCATGGAAGACATGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031978