Os10g0577900

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Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0577900| Description = Similar to Glycerol-3-phosphate acyltransferase (Fragment)| Version = NM_001072027.1 GI:115483649 GeneID:4349502| Le...")
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Gene Name

Os10g0577900

Description

Similar to Glycerol-3-phosphate acyltransferase (Fragment)

Version

NM_001072027.1 GI:115483649 GeneID:4349502

Length

6017 bp

Definition

Oryza sativa Japonica Group Os10g0577900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23499968..23505984

Sequence Coding Region

23500105..23500324,23500586..23500683,23500766..23500852,23500942..23501039,23501533..23501590
,23502297..23502398,23502495..23502556,23502664..23502774,23503096..23503174
,23503324..23503443,23503524..23503637,23504404..23504538

Expression

GEO Profiles:Os10g0577900

Genome Context

<gbrowseImage1> name=NC_008403:23499968..23505984 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23499968..23505984 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggcgccgccgctcgcctcctcgccgtcgccggcgtggaccgccatcctgcccgcgccggcgaggctctgctgctcccgccgcggcgccctccgcctcgaagccaaggccgcctggaggccggcggcccgagggccgcgggtgccggccaagggcgccgtcctcgcctccgaggtggtgggcccctctcccctcctcgacgcgcgcaacgagcaagagctcattttgcatatcagaaaggaagtggagaaagggaagctgcctgcagatgtcgctgccaatctagaagagctatactacaactacaaggacgcggttatgcagagcagggatccaaatgcacacgacatcgtgctttcaaacatggtggccctgttcgattgtgttctgctcgatgtagagaatccgtttacctttccgccttatcacaaagctgtcagggaaccattcgactattacatgtttggtcagaactacattaggccccttgtagactatagaaattcatatgttggtaatatatccattttccaagacatggaacagaagctccaacagggccataatgttgttctgatgtctaaccatcagacagaagcagatccagcaatcattgctttgctgcttgaaagaagcaacccatggatcagcgaaaacatagtttatgttgctggtgatagggttgttacagatcctctctgcaagccatttagtatgggaagaaacctcatttgtgtgtactcaaaaaagcatatgaatgattttcctgagctagttgatatgaagaggagggcaaatactcgtagtctgaaggaaatggctttacttttacgtggcggttcacagataatttggatagcaccaagtggtggtagagatcgtccggatcctttgacaggagaatggcatccggcaccatttgatgcatctgcagtggacaacatgaggaggcttctggagcattctggtgttcctgggcacatatatccactctcactgctctgctatgaggttatgcctccaccacagaaggttgagaaagagattggtgagcaaagggttatatccttccatggtgtaggcttgtcagtaactgaagagataaagtacagcgacattacggttcatacccaaaatgtcgacgagtgcagagagaaattctcagagtcattgtacaactcagtcgttgatcagtataatgcgctcaaatctgctatctttagaggtcgaggagcagattcatcggacagtgccatctcactctcacaaccatggcgatga</cdnaseq>

Protein Sequence

<aaseq>MQAPPLASSPSPAWTAILPAPARLCCSRRGALRLEAKAAWRPAA RGPRVPAKGAVLASEVVGPSPLLDARNEQELILHIRKEVEKGKLPADVAANLEELYYN YKDAVMQSRDPNAHDIVLSNMVALFDCVLLDVENPFTFPPYHKAVREPFDYYMFGQNY IRPLVDYRNSYVGNISIFQDMEQKLQQGHNVVLMSNHQTEADPAIIALLLERSNPWIS ENIVYVAGDRVVTDPLCKPFSMGRNLICVYSKKHMNDFPELVDMKRRANTRSLKEMAL LLRGGSQIIWIAPSGGRDRPDPLTGEWHPAPFDASAVDNMRRLLEHSGVPGHIYPLSL LCYEVMPPPQKVEKEIGEQRVISFHGVGLSVTEEIKYSDITVHTQNVDECREKFSESL YNSVVDQYNALKSAIFRGRGADSSDSAISLSQPWR</aaseq>

Gene Sequence

<dnaseqindica>138..357#619..716#799..885#975..1072#1566..1623#2330..2431#2528..2589#2697..2807#3129..3207#3357..3476#3557..3670#4437..4571#gggctggagatggagatggagatggagatggagggtgggtttggcacaaatcccgaagcgctccggcgaccactcccaacccagtccccactagggtaacaaccccctttcggattaggtttctagaagcttcttctatgcaggcgccgccgctcgcctcctcgccgtcgccggcgtggaccgccatcctgcccgcgccggcgaggctctgctgctcccgccgcggcgccctccgcctcgaagccaaggccgcctggaggccggcggcccgagggccgcgggtgccggccaagggcgccgtcctcgcctccgaggtggtgggcccctctcccctcctcgacgcgcgcaacgagcaaggttctctcccctccatttcccaatctcacaaactccattcgcattcgcattcgcattgctacttagtatgggggtcgcattggaatcctcgatgcatggacatggttggttggtgaattgctcgattattattatccttatattagttgtgccttggatatattggacctagaaaatcactctacctttagatgctctagaatctagatgagatgaaaccacgaggtgctctgctcacttctcgattcctgtcatgtgcagagctcattttgcatatcagaaaggaagtggagaaagggaagctgcctgcagatgtcgctgccaatctagaagagctatactacaactacaaggacgcggtaacatttcttcttttctatctgctgcaattgcaattagatcatcggctcatatggccacggggatactctgccttatcaggttatgcagagcagggatccaaatgcacacgacatcgtgctttcaaacatggtggccctgttcgattgtgttctgctcgatgtagaggttctacctcctgtcattatcttcctgatttcctctgacatttttcttttatgcccccttttataccaagctgcctcctccttttgcagaatccgtttacctttccgccttatcacaaagctgtcagggaaccattcgactattacatgtttggtcagaactacattaggccccttgtagactataggtaatgcaaatctcttcccctataggtatcgaggaccctttcaatcttcccctttttttgcccattcatggtatttagtatatttccacactttgtagcacaaatgctttaatcacatttcacatagatggcagatatttctgtcatgtcgcgcgacatgaccgtattgttttgatgggtgcagtgaggatatagataccctgtataggtgaaggcaatattctttaatcaaagcataagatattacctgctttcccagtccttgaagacattgttgttcccatcctctccataagtagctagtttttttaactaatggcttagtcatagatataccttcaacaagaaaagtgatatctattaacacattttggttttgcttattaccgtggcatgccgtcaaacttgcaacattcacatgtgttataatttatctgtatagcttataggtatgtcttccttatcatgctaactttttatttcatatgcccagaaattcatatgttggtaatatatccattttccaagacatggaacagaagctccaacaggttagttcatctaaactccattgtactatctattttctgtatttatttctgatcaaacatcttctttgataatcaatcctcttcaacatcttggtgagtgcaagctgccatggtttagtaaacagaacaaaccaataacccatgaatcacatatctagggttaaaagaactaggatagatagcaccctccaaagacctctctggaatcgacccttcattttttagatgaacaggagaggtaatcctcccagcgtcgttgatagtaatatcatgatacatactaacagaggttcccctccttccaagggttttgatatataagcatcaacagcaagagacggccataagaaagcttcaactagatatgatctacctcacatcaatgtttgattttttggtttcatagttatttagagatgtctgatagaagagaatgatgagaacaaacatcatgtgccaattcttatgctttagtgataaaagtgtttccagtgtatgtcagcacatgacgtccctcacaccggatgatttttgtgtaagttgcttctgaccttctgtcattgctggaagcacccgacgctaggtacttaggtgtttgtagtaattatcctaacatacttctgtcatgctttagagctgtcgaataattcttttaattgtttactaaagattcttatgcattttctgaaattgtttgttattgtagggccataatgttgttctgatgtctaaccatcagacagaagcagatccagcaatcattgctttgctgcttgaaagaagcaacccatggatcagcgaaaacatagtacgacagtaatttggacatacttggataatttacatgtgaatcgtcatatgctattgactaatcacattatcactaatatgccatcttttgtaggtttatgttgctggtgatagggttgttacagatcctctctgcaagccatttagtatgggaaggttttttaatccaccccagaagctcatatggctgagttgtcttttctgtttctagtgtttctattgcctggaaatattaatttcataaaggaattttctccctgcagaaacctcatttgtgtgtactcaaaaaagcatatgaatgattttcctgagctagttgatatgaagaggagggcaaatactcgtagtctgaaggaaatggctttacttttacggtattcttcccttatagtaacatgttagttttcatcctttttacttataaatattaggcctttttgacttgattgtttaaccatgtataatagaacatatatagttagtacttagtaatagaaaatataatacacatgctagttttataatgtgtcaaatttagcacctagttgcagtgcagtcaagactattcaaggaattattctgcattcaccattaatccgtcatagatctgaatttgtttcttcttaacgcaaacgcatgtacttcacctccttgttacattgggttgctcatgttttatcttttatgacatgtagtggcggttcacagataatttggatagcaccaagtggtggtagagatcgtccggatcctttgacaggagaatggcatccggtatgttatctggcttggttttgttgttccatatgatttgattagcttatcatgtttaccaaatctaatttctattttgtttgccaaatgtataattccaacttaccacttgtctgtatcttgtctgctacttacaaaaacaaggacaggcaccatttgatgcatctgcagtggacaacatgaggaggcttctggagcattctggtgttcctgggcacatatatccactctcactgctctgctatgaggttatgcctccaccacagaaggtatattcagttgcaacctcttactgtattactttagacatatttatcagagtatttgtttgacttttatatttgaataggttgagaaagagattggtgagcaaagggttatatccttccatggtgtaggcttgtcagtaactgaagagataaagtacagcgacattacggttcatacccaaaatgtcgacgaggtttgttctgaatgttggttgtagattatcatgtttaatatctggatagtgttatgctctgacttctagttattttgttaagtaacactgtaacaggcatttctaatgatttaccgattttacttatttttgtgtaattccctttggtgggggtgggtgcttctgcccagtcttcaggtagaacaataaccattagattagctttcaggactctgtttgccttcttactgattattgatcatgatgaactcttgcccaaatttcattgttttttctctatgctgggaatggctgaatatttatagtgttagggtagctgaaattaatggatatgtcaaaatcatgcatcaagtgttggccccatcatttaacctatttttcagggtgaacagacacatttgtgcatatatcttcttcagaacgtgaaactaagctacatcaatttacttttgtagagggtgcaaaataagttgtaatttcatcattgtgcagctcagtttatattccacttttgcatatgatattcacccatgctagcttgagattggtagttggatttgaaaattctcattgctgttactcttgtaggccccttgtctccagggtttaggctaagaacctttcttattttgtaaacagtttacagaactttgaactttcagacttgctcactgatagtgttacttattgatattgcctcatctgtttaagccttcctttttttatttgtgaagttgaatgtctttggttcttcttgtttttacagtgcagagagaaattctcagagtcattgtacaactcagtcgttgatcagtataatgcgctcaaatctgctatctttagaggtcgaggagcagattcatcggacagtgccatctcactctcacaaccatggcgatgaaactccgctttctcagttttgttctgtactgacctgagcttctttcccttctattttttctttgttgcactgacgcatggtggcacctactatgttccgtttactgggttttgagttcattaaagccttaactcttctacttccttaccgtgttttgatttcatggagccaggttctagttgatcagcatatacagcagacatcataataatttctatagaagcttgctatatactctctccatccaaaagtctaagacctatttcattttttggtttttccaaaagtctaagacctatttgtaatctctgtgttaaattaaattgttgactggaacctaagaagcaatcttagtatttattggttacatgcatgtgtatagttcattggttttgttacatggtggatgagtttcggatggagtacaacttacatttaaaataaaatcagctgaacatagatatagctggtaccatgctagagcataccttgcatcattgcatgtggttgcgccacataatgcacaatacactttgacttaaaaaatctttgcacatggtgattccttgtttctgtacgatacatctggttttgtagtttattaattattattatgaagcaagcattatagccgcaagaaattaccttttttcatgttttttttcctcatttactgcctcctgtgatgtactgttccaaaggtgatttgctcaacaacaggaactatctgatgaatgacataacaaatgtgctactccttttatttttcaggtctggatttctcaatgaagttaccttcatttcttttcgacacagcagatgaactgctgccgacattgcaatttttcctggcagaaccttttaaacttcggtatcctaacccatactaatcatgaaggggaggctgttactgtcatgcaaatcttgtgagttattgaaggccctggtcaggtggctcttcacggtatcatttggtacacacttgagttatatgtagcaataactgataaaatccctgtgattgttgacaggcctagtatgatgattttacccagctgaatcccagccacacatgatgcgttcgttcattgtttgcacacaaatattattgcgtcatatgagtattctttgggtcagaactgcacagcaacgcggcctgggcactcaatctggcatgttgtctatggggtgcatgcttgttaacagaagaagcccaacatgtgggattttgttttttgcggttaatttttttcctgttttccttttgttccatgtatatatattcgattttgatctccaggtttggagatacaatggtcaaagtgttatgatagtctcttagtttgttgcctcgaagttatactcgggcgcaacatgtctgactgatattctgatgatgttactcgtttctgaacttcctgacgccaatatggtgcttggatgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0577900, RefSeq:Os10g0577900