BGIOSGA032055

From RiceWiki
Revision as of 04:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032055| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032055, complete gene.| tag = OJ1208D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032055

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032055, complete gene.

LocusTag

OJ1208D02.5

Ensembl Transcript ID

BGIOSGA032055-TA

Ensembl Protein ID

BGIOSGA032055-PA

Length

6407

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9940971..9947377

Sequence Coding Region

9947177..9947377,9946776..9947084),complement(9945067..9945225,9943133..9943302),complement(9942747..9942902
,9941553..9941902),complement(9940971..9941158

Genome Context

<gbrowseImage1> name=IndicaChromosome10:9940971..9947377 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:9940971..9947377 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCCATTTTGAGCTCCTCCTCTTCCTCCTCCTCTGCTCGCCGTGCCTCTTCTCAGTCTCCGATGGGAGGACGGTGCGGCCCGCGAAACGGGGCGCCCCGTCGCCCCCCATTCGGGCGGTGAACCTCGGAGGTTGGCTCGTCACGGAGGGCTGGATCCTTCCCTCCCTCTTCGACGACATTCCAAACAAAGACCTCCTGGATGGAACCCAGCTGCAATTCAAGTCGGTGACGCAGAACATGTACCTGTGCGCCGAGCAGGGCGGCGGCACCATCCTGGTGGCGAACCGGACGAGCGCCTCGGGGTGGGAGACCTTCAAGCTGTGGAGGATCGACGAGGACACGTTCGACCTCAGGGTGTTCGACAACCTGTTCGTCACCGTCGCCGGCGACGGGGTCACCGTCGTCGCGACGGTGGCGTCGCCGGGGCCCGGGGAGGCGTTCCAGATCGTGCGCAACGGCGACAAGACTCGCGCGCGCATCAGGGCACCCAATGGCATGTTCCTGCAGGCGAAGACAAGCGACTCAGTTACAGCAGATTATGATGGGGAGACAAATTGGGGCGACGATGACCCCTCTGTGTTTGTGGTCACTAGGGTAGGCGGTCTACAAGGGGAGTACCAAATATGCAATGGATATGGTAAAGCAAAGGCCACACAAGTGCTCAGGGAACACTGGCGCACATACATAGTTGAGAGCGACTTCAAGTTCATATCAACAAGTGGGCTAAACGCAGTGAGAATTCCAGTTGGATGGTGGATTGCTAGCGACCCCAATCCTCCTGCTCCTTTCGTTGGAGGATCCCTCCAAGCCTTGGATAATGCATTCAAATGGGCAGAGAAGTATAATTTGGGAGTCATTGTGGACCTGCACGCTGCACCTGGGTCGCAGAACCCGTTTGAGCACAGTGCCTCCAGAGATGGTTCACAGGACTGGGGCACCACGGATGCCAACATCGCCCAAACTGTCCAAGTCATCGATTTCCTCACACACAGATACGCGAGTAGCCCCAGCCTCCTGGCCGTGGAGCTCCTGAACGAGCCACTGGCACCCGGGGTGACTCTCCCGGCTCTCATGAGATACTACAAGGACGGCTACAACGCAGTCCGCAAGTACACCTCGACGGCGTACGTGGTCATGTCCAACCGCCTCTCCGCCAGCAACACGGAGCTCCTCGGCTTCGCCGCCGGCTTCCCCGGCGCCGTCCTCGACGTCCACTACTACAACCTCTTCACCAGCAGCTTCAACGGCCTCACCGTCGACCAGAACATCGACTACGTCAGGACCAACCGCTCCGACGAACTCAGCACCGTCACAAGGCCGAATGGGCCGCTGACGTTCGTGGGAGAGTGGGTGGCTGAGTGGAATGTGCAGGGAGCATCTAACCAGGATTATCAGAGGTTTGCACAAGCCCAGCTAGATGTTTATGGACGAGCTACCTTCGGATGGGCCTATTGGACTTACAAGAACGTCAACAACCACTGGAGCATGCAGTGGAATATCCAGAATGGGATCATCTCTCTCAAAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MRHFELLLFLLLCSPCLFSVSDGRTVRPAKRGAPSPPIRAVNLGGWLVTEGWILPSLFDDIPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILVANRTSASGWETFKLWRIDEDTFDLRVFDNLFVTVAGDGVTVVATVASPGPGEAFQIVRNGDKTRARIRAPNGMFLQAKTSDSVTADYDGETNWGDDDPSVFVVTRVGGLQGEYQICNGYGKAKATQVLREHWRTYIVESDFKFISTSGLNAVRIPVGWWIASDPNPPAPFVGGSLQALDNAFKWAEKYNLGVIVDLHAAPGSQNPFEHSASRDGSQDWGTTDANIAQTVQVIDFLTHRYASSPSLLAVELLNEPLAPGVTLPALMRYYKDGYNAVRKYTSTAYVVMSNRLSASNTELLGFAAGFPGAVLDVHYYNLFTSSFNGLTVDQNIDYVRTNRSDELSTVTRPNGPLTFVGEWVAEWNVQGASNQDYQRFAQAQLDVYGRATFGWAYWTYKNVNNHWSMQWNIQNGIISLKS</aaseq>

Gene Sequence

<dnaseqindica>1..201#294..602#2153..2311#4076..4245#4476..4631#5476..5825#6220..6407#ATGCGCCATTTTGAGCTCCTCCTCTTCCTCCTCCTCTGCTCGCCGTGCCTCTTCTCAGTCTCCGATGGGAGGACGGTGCGGCCCGCGAAACGGGGCGCCCCGTCGCCCCCCATTCGGGCGGTGAACCTCGGAGGTTGGCTCGTCACGGAGGGCTGGATCCTTCCCTCCCTCTTCGACGACATTCCAAACAAAGACCTCCTGGTAAGTACATTTGGATGATTAAAAACTTCAAAAATCTTATCAAATCTTATTCTAAACATCAAACATAGAACACGCTTTTCTATGCATTTTAGGATGGAACCCAGCTGCAATTCAAGTCGGTGACGCAGAACATGTACCTGTGCGCCGAGCAGGGCGGCGGCACCATCCTGGTGGCGAACCGGACGAGCGCCTCGGGGTGGGAGACCTTCAAGCTGTGGAGGATCGACGAGGACACGTTCGACCTCAGGGTGTTCGACAACCTGTTCGTCACCGTCGCCGGCGACGGGGTCACCGTCGTCGCGACGGTGGCGTCGCCGGGGCCCGGGGAGGCGTTCCAGATCGTGCGCAACGGCGACAAGACTCGCGCGCGCATCAGGGCACCCAATGGCATGTTCCTGCAGGTAATTAGGACGCCGAAAAATTGATTGATGTCACTGTACAAGAGTCACCTCTTGCATTGCATAATAGTACTCCAATGGCAACAAGTAGCTATAGCTAAGTTAGTAGTGGATTAGGCTGGGATAGATATATACATGTGCTGATGATAGCTGCCAACTTGCGAGCATGGTCCATATGCATGTTGGTTTGTATTGTTCTTTGAACAATATTGGTGACAACGACAAATGTGGCCAGCGCATTTCATGCAGATCAATAAAGATCAAGCTAGCTGGAGGATCAAATAATGTAGTGCTAAAAGATAGTTAATTAGTACTTAGTAATAATAAGTGATAAAGTTAGGGATGGCATGTTTAAAGTTAAAGCCTGTTATGAGCCCTTAAACTATGCAAGACTGTCATCCCATATGACAGTTGAGACAACAAAACCTCTAACCATTAATTTTATTTATCTTTATTTCCTTCTTTCCATCCTTATGCAGCTAAGTTTTAACTTTAAAAAAATTAAGAGTCGTTGTTAATCATAGCAATGATGTTTTATCTCCTATTTCTTTCTTTTTTTGTCAGCACTAATTAGTATAGCTAAGAGTGTTATTATAATAACTGTTCTACATGTCCTAAGTGATAAAATGAGAAATATAGTTAGTAATATTAAGTGATAATAAAGCTAGCTATAGGGCGAATTAATCTACTTTAGTATGATGGTGACGGCTTCCTGCTTTTTTTTTAGCAAAGAGAAGTGAGCCAATGTTCCTTTGGACTATCTTTACATGGGTCAAAGGGATTCAACGTAGACAAAATAAACTCGAGCTTACTAAATCAAAGAGTCAAAGTGTTCGGCAGTCAAATTTTATACGGCTAAAATTAATTGTTTTTTTCTTGCCCGCTAAGCTTGACCAATACTATATATATTAGCTTGAAACATTTTTCGGTTTTTGTTGACTAATTACATATTTAGTCTAACCTGAGAAGGTATATTTAAGAGTAGAAGGTTAGTTAGTCAATTTGCTTCTTTACTGGTTAACTTATGTCAAGTGTAAAGGTAGAACCCGATAAAAACTCTTAAACAATACACATTAAATGATTGTACTTACAACGGTCATAACAATTAATAAAGACTGACCATTAATATAATATAAAACTATTACTGTTCTGTTCTTTTTCCAACCATCATGTAGCAACAATATTTATCTATCCACTCATTTTCTCTCTTTTGTATCAGCAAATATTCTTAACTAGTAAGATTAAAAGCCATATGCCTTTGTAGTGGTAGGTTAAGGGTTCCACTTGAGTCCTAGTTTTGAGGATTAATTTAGGTTTCTTAATCCCTTACAAACCATAGCCACTCGTTTTCTTTGCTTGGATGCATAGCATAGGTGGAATACAATATATCTCTTGTAGCTGAATTTAAATAGAAACGAAATATTGCTAATTAAATTCAGCAAGTCAAAATAAATTTTTAGTATGCCTTGCTAAATTTATTCTAATCCTTACCAAGATTATTTCTTTTGGTTTGATGCAAAATCTGAATCCTTTTTCTCTTGTGATGATGCTAGGCGAAGACAAGCGACTCAGTTACAGCAGATTATGATGGGGAGACAAATTGGGGCGACGATGACCCCTCTGTGTTTGTGGTCACTAGGGTAGGCGGTCTACAAGGGGAGTACCAAATATGCAATGGATATGGTAAAGCAAAGGCCACACAAGTGCTCAGGGTAAGACACATGTCAAACTCATTTCAGCTCCACTTGTTACTTGGACGTTTGATACAAAACGTACAATTAAAGGTATATAGTCTTGAATGGGGTAAATATCTGAACACTCGAAATATAGTAAAAGGAATATGCAAATTGCAGAACCAATTACTTGACTACTTCCTCCATATCCCAAAATAAATTAGCCTAGTACGAAATGCATCATATTCTAATATACTAAGTTGGTTATGACACATATTTCCCAAACGAAATTAGCCTAGTACGAAATGCCTGTTTGGAGGAGCTTAAGATTCTGAGAAGTAGCTGCTGAGAAGCTAGCTGGTGAGAATCTGGAGAAGCTGAAAAACCCAGCTTCTGGCTTCTAGTTCATTTTCCAGATTCTACAACTATAGATTCTCAGAATCTAGACAAAAAGCTAGACTGTTTGGGGGGAGCTTCTTGAAGCTGCAGCTGCTAGAAGCTCCTCCAAACAAGTCCTAAGTTGGAGTATTACTAGGATATATCACATTCGTACTAGTTTTATTTTTTTAAGAATGGAGGGAGTATATATATATGGCAAAAGAGAAGAAACATGAGGATAGCTCTGTTTTCATATATGTGCTATTGTTATACTCCGTCTGATTTTAAATTTATATTGTTGCTGATTTTTAGACATAACGTTTGACTATTTATTTTATTAAAAAACTTAGTGTAAATATAAATAATTTATACTTAAAATATCTTTAGTGATAAAATAAATCACAAGAATCAAACATAATTAACGTGTAAAGTTAACAGTATTGTATATTTAAATATAGAGGAAATATTAATGTAAATATCCTTATGATCGAAGTAAAATATGTTTGACTTGGTTAACCACAAACCAGTAAGATTGAACATAAAAAAAAAAAGACTAATTGACCAACTTGAATTAATCTTTAGTATACCAACTTTTCAGCTGTTCAATTCCCAGAAAGTGATATTTATATTGGCTTCCATAGTCCAATGGGAAATGACTGTTGATGGGAAAAGCTCTTAATCTCTTGAAAACGATCCATGCATCTAGATACATACTAGCTGGCTTCCAAGTTTGGTTTTCAGTTGATGCATTCAATCCATTCTTATTCTTTGACAAAATTATATAGACAGCTGTCTCTGAATAATTAGGTACGGCGAGAACTGGTATAGTCAAATAATAATGGCTGCGCTATGAATAAACGTTTCCAGGAAGTACTTTGGACGAAATTGATGAAAACCATCTTAATTTTTCTACAAGGACCCGTCTGGTTTCTGATTTAGGTTTTGAGTCCACTCACATTTTCTCCAGTCCTAGGTATTCCATGAGAGAAATAGATCTCCCTCTGTTTTTTAATAGATGACGCCGTTGACTTTTTCTTATACGTTTGACCATTCGTCTTATTAAAAAATTTTATGCAAATATATAAGATATAAATCACACTTAAAGTACTGTGAATGATAAAATAACTCATAACAAAATAAATTATAATTACGTAAATTTTTTGAATAAGACGAAGGGTCAAACATGTGAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGATAATACTAGTCAACAAATGACAGCCAGGATATGTATATATAGATAAGCACACAGAAATCCTTGCATTTTGATGAGAATTACCTACATATCTCGTGATATTGATGCAAATTTTTTTTATAACAGGCAGATTGCCACCTCTTTTTAATTATTGCACATGTACAAATTATAAGTATATATCCTATTTTTTTGTGTTTTGCAGGAACACTGGCGCACATACATAGTTGAGAGCGACTTCAAGTTCATATCAACAAGTGGGCTAAACGCAGTGAGAATTCCAGTTGGATGGTGGATTGCTAGCGACCCCAATCCTCCTGCTCCTTTCGTTGGAGGATCCCTCCAAGCCTTGGATAATGCATTCAAATGGGCAGAGTAAGTGTATAATTGTTCCATATTTAGTCAAAATTAAAAGCATATGCTCATTGTTTTTAATTTCCAGCATAAGTCAAGTATGATTAAATTCTCTGTCTCCAACAATTTTGATTTTGGGGGAAGAATAAATTGGTTTGGAATCAGGACAATGAGCAGTCCCTTGATAGATGGTTGTACTTTACAAATGACAGAGATTTTCTATGCATGTGTCCTCCGTATGTACATTGCAGGAAGTATAATTTGGGAGTCATTGTGGACCTGCACGCTGCACCTGGGTCGCAGAACCCGTTTGAGCACAGTGCCTCCAGAGATGGTTCACAGGACTGGGGCACCACGGATGCCAACATCGCCCAAACTGTCCAAGTCATCGATTTCCTCACACACAGGTCACAATTTTAATTATTCCACATAGATATTTCAATTCACTACACAAAATAGGTGTAATTTGTCTTGTCTAGTTTATCCATTATCTCTTCGGAAGTAAAATACGAGGAATTTCCATTAATCATGAATGGTTTGTCCTAATTTAATTTACTTATTGTAAAATAAACAGTAAATTTTAGTAAGCTATAAGTTTTTTTTTTCAAAACTATTAGTTTGCTGCAATTTTTGCTTGTCATTCCAAATAACTGCAAGTGATTGTAAGTCTATAATAATAGTATACTCCCTCCGTTTCTAAATATTTGACGCCGTTAACTTTTTTTAAATACGTTTGATCGTTCGTCTTATTCAAAAACTTTAAGTAATTATTAATTTTTTTCTATCATTTGATTCATTGCTAAATATACTTATATGTATACATATAGTTTTACATATTTCACATATGTTTCTGAATAAGACGAACGGTCAAATATATGCTAAAAAATTAACGATGTCAAATATTTAGAAACGGAGGAAGTATATGACAATCCGAAAGATGGTTCAACCACTAGGGGATACAGTTATAGTTTTAGAGCAATTCTACGGTTTTTAAGGAGGTACCATGAGGTACCAAAATTTTCATGGTACATCATAGTACCTAGGTACCATAAGGTACCATGAGATACCAAATTTACAATAGAAAAAATGGTACTTACCTCCTCAAGGACCGTAAAACTGCTCATAGTTTTATGATAAACCCGTTGTGAAATACAGCACAAAACTAAAGTTGTAGCGAAATGATAGTTTCATTCAAATAATTATTATAGTTTGCTGAAATTTACTCTCAAATAATTAAATTACTCTACACAGATACGCGAGTAGCCCCAGCCTCCTGGCCGTGGAGCTCCTGAACGAGCCACTGGCACCCGGGGTGACTCTCCCGGCTCTCATGAGATACTACAAGGACGGCTACAACGCAGTCCGCAAGTACACCTCGACGGCGTACGTGGTCATGTCCAACCGCCTCTCCGCCAGCAACACGGAGCTCCTCGGCTTCGCCGCCGGCTTCCCCGGCGCCGTCCTCGACGTCCACTACTACAACCTCTTCACCAGCAGCTTCAACGGCCTCACCGTCGACCAGAACATCGACTACGTCAGGACCAACCGCTCCGACGAACTCAGCACCGTCACAAGGCCGAATGGGCCGCTGACGTTCGTGGGTAAGTTCATTTGCAAGTTTCTCTAGCGAATTTAATTACTGTCAACATGGGCACTCGCTTCATGTTGAAAGAAAAAGTCGTTTTGGAGGACACGGTCTTAAAGAAATAATTCTGATCAGTATTTTGTACTACAATATATATAAATATTAACGAATATATTATTTTATTAAAGTGCATTTTAAGATTAATTTATATATATGGTCTTCATATTCAGAAGAAAAAAAATATTTTAGAAGATATTTGTAGTCGAAATTCTTGAAATTTAATATTGGTCATATCCAAAATGACAATTACTTTCAACCAACCTAGAGAGGGAGTGAGTACTGTTTATACATGAAGATTACAAGTTCTTGAACGTGATCGATACATATATGTTGCTTAATTATATATGCAGGAGAGTGGGTGGCTGAGTGGAATGTGCAGGGAGCATCTAACCAGGATTATCAGAGGTTTGCACAAGCCCAGCTAGATGTTTATGGACGAGCTACCTTCGGATGGGCCTATTGGACTTACAAGAACGTCAACAACCACTGGAGCATGCAGTGGAATATCCAGAATGGGATCATCTCTCTCAAAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032055