Os10g0578900

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Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0578900| Description = Similar to CTP:phosphorylcholine cytidylyltransferase (EC 2.7.7.15)| Version = NM_001072035.1 GI:115483665 GeneID:434...")
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Gene Name

Os10g0578900

Description

Similar to CTP:phosphorylcholine cytidylyltransferase (EC 2.7.7.15)

Version

NM_001072035.1 GI:115483665 GeneID:4349510

Length

2622 bp

Definition

Oryza sativa Japonica Group Os10g0578900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23534765..23537386

Sequence Coding Region

23535173..23535268,23535391..23535501,23535621..23535689,23535827..23535982,23536071..23536113
,23536221..23536316,23536791..23536904,23537045..23537229

Expression

GEO Profiles:Os10g0578900

Genome Context

<gbrowseImage1> name=NC_008403:23534765..23537386 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23534765..23537386 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgcgtttcgcattccagaaagcggactagggctccctccaactccaactccaagcccacttcacaaacccaaccgccgccgccggagctcaccgaccgccctgtccgcgtctacgccgacggcatcttcgatctcttccacttcggccatgcccgcgccctcgagcaggccaagttgctgttccccaacacgtacctgctagtgggctgctgcaacgacgagctcaccaaccgctacaagggcaagaccgtcatgacccaggatgagcgatacgagtcccttcgccactgcaaatgggttgatgaggtcattcctgatgctccatgggtcctcacgcaagagttcattgacaaacatcagattgactatgttgctcatgatgcactgccttatgccgatactagtggagctgctaatgatgtctatgaatttgttaaaaagattggcaaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcataatgaggatattgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacacaaggaaagatttaggcgtaagctatgttaaggaaaagcaactccaggtcaacatgaagataaataaactgcgagagactgtaaaggcgcatcaagaaaagttgcaaacggtggcgaagacagctggaataaatcatgaagaatggttggccaatgcagatcgctgggttgctggtttcttggagaagtttgaggaacactgccacaacatggaaactgccatcaaggggcgtatccaggagaaattgaggaggcaaacaagcagagggataattgggggtctaatgcagcaaccggtggcagcgtaa</cdnaseq>

Protein Sequence

<aaseq>MARVSHSRKRTRAPSNSNSKPTSQTQPPPPELTDRPVRVYADGI FDLFHFGHARALEQAKLLFPNTYLLVGCCNDELTNRYKGKTVMTQDERYESLRHCKWV DEVIPDAPWVLTQEFIDKHQIDYVAHDALPYADTSGAANDVYEFVKKIGKFKETKRTD GVSTSDLIMRILKDYNQYVMRNLARGYTRKDLGVSYVKEKQLQVNMKINKLRETVKAH QEKLQTVAKTAGINHEEWLANADRWVAGFLEKFEEHCHNMETAIKGRIQEKLRRQTSR GIIGGLMQQPVAA</aaseq>

Gene Sequence

<dnaseqindica>2119..2214#1886..1996#1698..1766#1405..1560#1274..1316#1071..1166#483..596#158..342#ggagtcttgttccctttttattgagaggatcccctccctcgtgtcgacacgatcgtccaaaatagggaagagggagggggttcttcttctcctcgatccggttgaggactttgaggtagagagaggcagaggcgacgaggaaggatctgatctatcgatggcgcgcgtttcgcattccagaaagcggactagggctccctccaactccaactccaagcccacttcacaaacccaaccgccgccgccggagctcaccgaccgccctgtccgcgtctacgccgacggcatcttcgatctcttccacttcggccatgcccgcgccctcgagcaggccaagttgctgtcagtttctctctcttctcttctttacattacattacatggatccccccgatcgatttctcttggatctgggcctctatgttagaatagatcgagagatctgttcaattccaattcctgattgctcatggcgatcgcaggttccccaacacgtacctgctagtgggctgctgcaacgacgagctcaccaaccgctacaagggcaagaccgtcatgacccaggatgagcgatacgagtcccttcgccactgcaagtccgtctccttccttccttcttcaccttaccacatacgtacatggattttcatcaactgctcttactggattctagtattacatatcaatatatatgcaacaactgcatttgcattggattggactagactccttaatcaacacgtagagaacagaatttggattaacaagcacacaaggaagccaccaacgtttctatttccctttcctagccacaatattatgctcgcggcttgagtctcccttctgttgtgctctttgcaaactacatttctggattaacttatttcaaggggcctcttaatctctaatttagtgctgtaaatttaggttccataattacttctcaccttgctcctctcagctactttcatagctccactgatcctggatatttttttacatcagtcaatttttttccttccctcttgtgttgtgctgatatcaagcttcattattgtctgccttcttagatgggttgatgaggtcattcctgatgctccatgggtcctcacgcaagagttcattgacaaacatcagattgactatgttgctcatgatgcactgccgtaagtttcagcagcacaccaactattatcgaattcccattttttgtccctttaatactgtgctctttcagcttaactgaccggagttccttttttttttgccacagttatgccgatactagtggagctgctaatgatgtctatgaatttgtaagtcagagtagctatatttgctactagtaactacagatatttctcttgcattgctccttactgatggctgtcttcatgtacttaggttaaaaagattggcaaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcataatgaggatattgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacacaaggaaagatttaggcgtaagctatgttaaggttagtctcatctctgtgttggtttaccttcatcttcttgcagacaaattcagatgcatttttattatttgcatggttttgctgcttttgcaagtaatgacatgcttgtttatgggttcttactatcattctatcaggaaaagcaactccaggtcaacatgaagataaataaactgcgagagactgtaaaggcgcatcaagaaaaggtaaaccatgcatgtgactctaagatatttctgctgtgtcacatggaaggacagggagttccccttgtgtttacgactttacagatatcctgacccgctgggtaaattatttggtgcagttgcaaacggtggcgaagacagctggaataaatcatgaagaatggttggccaatgcagatcgctgggttgctggtttcttggagaagtttgaggaacactgccacaacatggtaagtttatacatgaaacttgagacaaggttgccgagaattcgtcgacagccagattgagggtaaaatgcaaaattatttggacgtggtacccaacactgattcctcgttggtatggtcaggaaactgccatcaaggggcgtatccaggagaaattgaggaggcaaacaagcagagggataattgggggtctaatgcagcaaccggtggcagcgtaataagttgtagaggagagatgacgttgagttggagtaagctgccctggggtcaccacggacgagaaatgtagtgaagatgccttcttggttggcggttatagtgtgagtgtgtgcttgtgtcatggaatgtgatgcttgtacgagttgttacagcttaattacatgggagaggctttgtttcttgtttatttttttgcggggggtgggggtgttggtttccttgtatacaaatgtctatagcagaggcgtttggtgcataatccagagtgtgtagtaggtgttggacagatgaagttgagtggtactgtagtgttgttgttctcttcccttgggttttgtctgtaacgtcgagagggagagatgttgacgctggctgaaagcacaacacaagcagagtgatattatact</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0578900, RefSeq:Os10g0578900