BGIOSGA032106

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Revision as of 04:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032106| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032106, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA032106

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032106, complete gene.

LocusTag

OSJNBB0052C09.8

Ensembl Transcript ID

BGIOSGA032106-TA

Ensembl Protein ID

BGIOSGA032106-PA

Length

2482

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:8404615..8407096

Sequence Coding Region

8406911..8407096,8406260..8406804),complement(8406008..8406094,8405868..8405924),complement(8405316..8405554
,8405037..8405155),complement(8404788..8404905,8404615..8404727

Genome Context

<gbrowseImage1> name=IndicaChromosome10:8404615..8407096 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:8404615..8407096 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGACGGCGGCGGAGGTGAAGAGGCTGCTGCGTCTCGCCGGGCCTCTGATGGCCAGCTTCGTGCTGCGGAACTCGGTCCAGATGGTGTCCATCATGTTCGTCGGCCACCTCGGCGAGCTCCAGCTCGCCGGCTCCTCCCTCGCCGCGTCGCTCGCCAACGTCACCGGCTTCAGCTTTCTCTTCGGCATGTCGAGCGCGCTGGACACGCTGTGCGGGCAGGCGTACGGCGCGGGGCAGCACCGGCTGCTCGGCGTCTACGCGCAGCGCGCCATGCTGGTGCTCGCGGCGGCCGCCGTCCCCATCGCGCTCGTCTGGGCCAGCGCCGGCGAGATCCTCCTCCTCTTCGGGCAGGACCCGGCCATCGCCGCCGAGGCCGGCACGTACGCGCGGTGGATGATCCCGTCGCTCGCGGCCTACGTGCCGCTCGCCTGCGCCCTCCGGTTCCTGCAGGCGCAGGGCATCGTCGTGCCGGTGATGGCGAGCTCCGGCGTGGCGGCGGTCGGCCACGTCGCCGTGTGCTGGGCGCTGGTGCACAAGGCCGGCATGGGGAGCAAGGGCGCCGCGCTGAGCGGCGCCGTCACGTACTGGACCAACCTCGCCGTCCTCGCTCTCTACGTGCGGCTGTCCGGCGCCTGCGAGACGACGTGGACCGGGTTCTCCATAGACGCCTTCCGCGAGCTCCGCCGGTTCACCGAGCTCGCCGTGCCGTCCGCCATGATGGTCTGCTTGGAGTGGTGGTCGTTTGAGATACTTGTGCTGCTCTCGGGCATTCTGCCGAATCCTCAGCTTGAAACTTCTGTTCTGTCAATCTGCTTGAGCACTTCTTCTCTCCTGTTCATGGTGCCACGTGGCATTGGCTCATCTTTAAGCACGCGCGTCTCGAACGAACTAGGTGGCGGGCATCCTCGAGCAGCAAGGATGGCAGCGCGAGTCGCCATAGCCATGACCGTGCTTGTATGCCTCGTGCTAGTGATAGCCATGATTTTTCTGCGCAATGTCTGGGGAAATGCCTATAGCAGCGAGGAGGAAGTGGTGGCATATATTGCAAGTATGCTCCCCGTCCTCGCGGTCTCCTTCTTCATAGATGGCATCAATGGTGCTCTTTCAGGAGTTTTGACAGGATGTGGTAAGCAGAACATTGGCGCTCATGTGAATCTTGCTGCGTTTTACTTGGTCGGTATTCCGACGGCTGTGCTGCTTGCATTTGTCCTCCATCTCAATGGAGAGGGTCTTTGGCTTGGCCTTGTGTGTGGCAGTATCAGTAAAGTAGGGATGCTCCTCTTCATCACACTGCGTACAGATTGGGGAAAAGAAGTGCGAAAACCTTCACCCTACAAACACTTCGGCTATCATGGCAAAAGAAAGGGTCTTCAGTTCAAGTCTTCCAACTCGATGAAGAATTCGAGAAATGTTGGTGTAGTATTCTCCAATGAAGATGTATTCAACGTGGTTCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MASTAAEVKRLLRLAGPLMASFVLRNSVQMVSIMFVGHLGELQLAGSSLAASLANVTGFSFLFGMSSALDTLCGQAYGAGQHRLLGVYAQRAMLVLAAAAVPIALVWASAGEILLLFGQDPAIAAEAGTYARWMIPSLAAYVPLACALRFLQAQGIVVPVMASSGVAAVGHVAVCWALVHKAGMGSKGAALSGAVTYWTNLAVLALYVRLSGACETTWTGFSIDAFRELRRFTELAVPSAMMVCLEWWSFEILVLLSGILPNPQLETSVLSICLSTSSLLFMVPRGIGSSLSTRVSNELGGGHPRAARMAARVAIAMTVLVCLVLVIAMIFLRNVWGNAYSSEEEVVAYIASMLPVLAVSFFIDGINGALSGVLTGCGKQNIGAHVNLAAFYLVGIPTAVLLAFVLHLNGEGLWLGLVCGSISKVGMLLFITLRTDWGKEVRKPSPYKHFGYHGKRKGLQFKSSNSMKNSRNVGVVFSNEDVFNVVL</aaseq>

Gene Sequence

<dnaseqindica>1..186#293..837#1003..1089#1173..1229#1543..1781#1942..2060#2192..2309#2370..2482#ATGGCGTCGACGGCGGCGGAGGTGAAGAGGCTGCTGCGTCTCGCCGGGCCTCTGATGGCCAGCTTCGTGCTGCGGAACTCGGTCCAGATGGTGTCCATCATGTTCGTCGGCCACCTCGGCGAGCTCCAGCTCGCCGGCTCCTCCCTCGCCGCGTCGCTCGCCAACGTCACCGGCTTCAGCTTTCTCGTACGCACCTGTCATCGAACACCTTGCTCGCATGCAAGAACTGCTTCATCTCTCCGATTTCTTGGTCAAATTTGTGACTGATTTCTCGGTGGGATGATCTGATCAGTTCGGCATGTCGAGCGCGCTGGACACGCTGTGCGGGCAGGCGTACGGCGCGGGGCAGCACCGGCTGCTCGGCGTCTACGCGCAGCGCGCCATGCTGGTGCTCGCGGCGGCCGCCGTCCCCATCGCGCTCGTCTGGGCCAGCGCCGGCGAGATCCTCCTCCTCTTCGGGCAGGACCCGGCCATCGCCGCCGAGGCCGGCACGTACGCGCGGTGGATGATCCCGTCGCTCGCGGCCTACGTGCCGCTCGCCTGCGCCCTCCGGTTCCTGCAGGCGCAGGGCATCGTCGTGCCGGTGATGGCGAGCTCCGGCGTGGCGGCGGTCGGCCACGTCGCCGTGTGCTGGGCGCTGGTGCACAAGGCCGGCATGGGGAGCAAGGGCGCCGCGCTGAGCGGCGCCGTCACGTACTGGACCAACCTCGCCGTCCTCGCTCTCTACGTGCGGCTGTCCGGCGCCTGCGAGACGACGTGGACCGGGTTCTCCATAGACGCCTTCCGCGAGCTCCGCCGGTTCACCGAGCTCGCCGTGCCGTCCGCCATGATGGTCTGGTCAGTGACACGTCTTAGTCCTGACACCATTGCTGGTTTCTTGCTTGCTTGAGCAAATCTTGGAACATGTTTTGTGATCGAGAGAGCAAATCGAGCTTGCTTGAACAAATTTTGGGAAATTTTTTATGTGAGGATTGATTAGCTGGTTGATTTGGTTGTGTGCAGCTTGGAGTGGTGGTCGTTTGAGATACTTGTGCTGCTCTCGGGCATTCTGCCGAATCCTCAGCTTGAAACTTCTGTTCTGTCAATCTGGTAATTTGATCACAAGCAACACAGATACAAATCAGCTCTCCTCCTTTCCATGGGTATTTTGTTAACTCCAATTTGATTTGCAGCTTGAGCACTTCTTCTCTCCTGTTCATGGTGCCACGTGGCATTGGCTCATCTTTAAGGTTTGTTTCGACTCTAAAGTCTAAACTCTATTTCTTCATACAAGTGTCATCTTTTAGAACAGTGCCCTACTGTGTTGTTCTCTTACAGGGTTTGCAAATTCGTTTGGAACATTTTCTATTCTGCTTCTTTTTTTTTGGGGGGAAATTCCCGAAAATTTCTGAACGACAATATATGAAATTTAAATAAGTTTCGACCAAATTCAGTTTACCCTTATTTTATTTACATGGCAAGCATGCTTTCTTCCTTCAGTTTACATGTCATTGGATTAGATATTTAGAACTGATTAGTTCCACCAATTTTGCACTTGCGCAGCACGCGCGTCTCGAACGAACTAGGTGGCGGGCATCCTCGAGCAGCAAGGATGGCAGCGCGAGTCGCCATAGCCATGACCGTGCTTGTATGCCTCGTGCTAGTGATAGCCATGATTTTTCTGCGCAATGTCTGGGGAAATGCCTATAGCAGCGAGGAGGAAGTGGTGGCATATATTGCAAGTATGCTCCCCGTCCTCGCGGTCTCCTTCTTCATAGATGGCATCAATGGTGCTCTTTCAGGTACAAATCCATACCATATTTCTACTTGTGATCAATCATCAAAATATTTCAGCTGTACATTTTTTTTCTCATTGTCGGCGAGCTTTTCGGGTGAACTGATTGGTTCATACAGTTAAGTCGATCAGTAGTAATAAAATTACTTGGACCTCCAAACGTTCAGGAGTTTTGACAGGATGTGGTAAGCAGAACATTGGCGCTCATGTGAATCTTGCTGCGTTTTACTTGGTCGGTATTCCGACGGCTGTGCTGCTTGCATTTGTCCTCCATCTCAATGGAGAGGTAGCACTACTCTCTCAATCTCTTTTGAAAAAAATATGCAGTGCAGATTGTTTTTTTGTTGATTCATAGAAATGTTTTGGTGTACCTTTGTATGATGATGACTGAAACTGCTAGCTGTTTCCATAAAACAGGGTCTTTGGCTTGGCCTTGTGTGTGGCAGTATCAGTAAAGTAGGGATGCTCCTCTTCATCACACTGCGTACAGATTGGGGAAAAGAAGTGCGAAAACCTTCACCCTACAAACACTTCGGTTAGTATTATGTATTCAGTGGAACTTCAGTTAACTGTGTTTCGTTTGTCCAATTTTCAGGCTATCATGGCAAAAGAAAGGGTCTTCAGTTCAAGTCTTCCAACTCGATGAAGAATTCGAGAAATGTTGGTGTAGTATTCTCCAATGAAGATGTATTCAACGTGGTTCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032106