Os10g0579200

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Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0579200| Description = Sugar transporter family protein| Version = NM_001072037.1 GI:115483669 GeneID:4349512| Length = 4408 bp| Definitio...")
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Gene Name

Os10g0579200

Description

Sugar transporter family protein

Version

NM_001072037.1 GI:115483669 GeneID:4349512

Length

4408 bp

Definition

Oryza sativa Japonica Group Os10g0579200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23550565..23554972

Sequence Coding Region

23550936..23551064,23551171..23551308,23551441..23551539,23551936..23552016,23552826..23552888
,23553128..23553175,23553277..23553645,23553737..23553838,23553945..23554069
,23554155..23554221,23554322..23554381,23554472..23554550,23554628..23554734
,23554837..23554878

Expression

GEO Profiles:Os10g0579200

Genome Context

<gbrowseImage1> name=NC_008403:23550565..23554972 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23550565..23554972 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgatcctctctccaactccaccaccaacaacaagagggcagaggggatccagctccagcacggcgactgcgagagcgagagcactgcgcccttgctgctcgcgccacacgagtcctaccgcctctccgccgcaatcctccccttcctatttccagctttgggcggccttctctatggctacgacatcggagcaacgtctggtgctaccatatcgctcaagtcatccaccttcagtggcaccacatggtacaacttgtcatcgctgcaaaccggccttgtcgtcagtggctcactctatggtgctctcatcggttccatcttggcattcaacattgccgattttctaggacggcgcagagagcttattctttcttctgtctcatatttgattggagctcttctcacagcagcagcacctaacttccctatcatggtggttggccgctttttctatggcataggaataggattggctatgcatgctgctccaatgtacattgcagagactgctccaagtcagataagaggcatgctcatttctctcaaggaattctttattgttcttgggatgcttcttggctacattgcaggcagtctctttgtcgaagtggtttctggttggcgctacatgtatgccaccagtacaccattatgtctcatcatgggaattgggatgtgctggttacctgcttcacctaggtggcttctgttatgtgccatacaagggaagaggaatattatggagtcaaaagaaaatgctacccgttgcttatgtcgattgaggggtcaagcttctcctgatttggtttcggaacaagttgatttgattctggatgaactgtcatacgttgatcaagagaggcaagcaggcttcagtgagatctttcagggaaaatgcctcaaagcaatgataatcggatgtggcttggtgttctttcagcaggttactggtcaaccaagtgtgctatattatgctgcgacaatccttcagagtgctggattctctggtgcatctgatgctactcgtgtatcagttcttcttggcttactgaagttgattatgactggtgtggcagttcttgtggttgacagacttgggagaagaccattactgattggaggtgttagtgggattgctgtttccttgtttttgttatcttcgtactacaccttattgaaggatgctccttatgtggctgtaatagcacttctactctatgttggctgctaccagctgtcattcggtccaattggctggcttatgatttcggaagttttcccattaaggctgcgagggcgtgggttgagtattgctgttcttgtgaattttgcctccaatgcactagtcacttttgctttctccccattggaggatttgattggaactgggatcctcttctctgcgtttggggtgattgcagtggcgtctcttgttttcatattcttcatcgtgcccgagacgaaagggctcaccttggaagaaattgaagccagcctgtag</cdnaseq>

Protein Sequence

<aaseq>MADDPLSNSTTNNKRAEGIQLQHGDCESESTAPLLLAPHESYRL SAAILPFLFPALGGLLYGYDIGATSGATISLKSSTFSGTTWYNLSSLQTGLVVSGSLY GALIGSILAFNIADFLGRRRELILSSVSYLIGALLTAAAPNFPIMVVGRFFYGIGIGL AMHAAPMYIAETAPSQIRGMLISLKEFFIVLGMLLGYIAGSLFVEVVSGWRYMYATST PLCLIMGIGMCWLPASPRWLLLCAIQGKRNIMESKENATRCLCRLRGQASPDLVSEQV DLILDELSYVDQERQAGFSEIFQGKCLKAMIIGCGLVFFQQVTGQPSVLYYAATILQS AGFSGASDATRVSVLLGLLKLIMTGVAVLVVDRLGRRPLLIGGVSGIAVSLFLLSSYY TLLKDAPYVAVIALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSIAVLVNFASNA LVTFAFSPLEDLIGTGILFSAFGVIAVASLVFIFFIVPETKGLTLEEIEASL</aaseq>

Gene Sequence

<dnaseqindica>3909..4037#3665..3802#3434..3532#2957..3037#2085..2147#1798..1845#1328..1696#1135..1236#904..1028#752..818#592..651#423..501#239..345#95..136#gggggcaactaggaagttcctcttcctcctccgagaacgagaacccacacctccataacttcaatttccaagttatatatatataaaaaaggcaatggcggacgatcctctctccaactccaccaccaacaacaaggtacttgtcgatcttgcttctaccaattccaattactactactccatcggctcggcagattgatttgattgtttgcttcttcttttttctgattgatttcagagggcagaggggatccagctccagcacggcgactgcgagagcgagagcactgcgcccttgctgctcgcgccacacgagtcctaccgcctctccgccgcaatcctcccgtgggttcctcttctcctcctccttcttcctcctcttcttccttggtcggtaataaggctggcaccttcttctgcagcttcctatttccagctttgggcggccttctctatggctacgacatcggagcaacgtctggtgctaccatatcgctcaaggtctctattactatactccactattcatcgattttgttaataatagaactatatattacttgagcgattacccatcattttgctttgcagtcatccaccttcagtggcaccacatggtacaacttgtcatcgctgcaaaccggccttgtcgtaatgcccttaccctctcctccatttgtttctctttttttttccttgtacactaccacaatttcatttcttcttcccaattctcgttatgcttatgcaggtcagtggctcactctatggtgctctcatcggttccatcttggcattcaacattgccgattttctaggtctaatacccccacccacctcctctcttttcttttaacattgccctagtcttctgttttcgcttatgcttatctcttaccacaggacggcgcagagagcttattctttcttctgtctcatatttgattggagctcttctcacagcagcagcacctaacttccctatcatggtggttggccgctttttctatggcataggaataggattggtaatcaaccacaattatcttattcatgccatacttgacactgcaaaacacatacaaacaccacacggtgtttatgacgcttacgctaactctttgctttcgtcaggctatgcatgctgctccaatgtacattgcagagactgctccaagtcagataagaggcatgctcatttctctcaaggaattctttattgttcttgggatgcttgtaagttcacattacatgacctgcccttttccccctctcttcctttctctctcagactacttagtcatttacttacgtttctcttttgcagcttggctacattgcaggcagtctctttgtcgaagtggtttctggttggcgctacatgtatgccaccagtacaccattatgtctcatcatgggaattgggatgtgctggttacctgcttcacctaggtggcttctgttatgtgccatacaagggaagaggaatattatggagtcaaaagaaaatgctacccgttgcttatgtcgattgaggggtcaagcttctcctgatttggtttcggaacaagttgatttgattctggatgaactgtcatacgttgatcaagagaggcaagcaggcttcagtgagatctttcagggaaaatgcctcaaagcaatgataatcggatgtggcttggtgttctttcagcaggtggtctcttaagtcatcatatagccatactcgtatgttccatgatgtaaagatgaaactgacggtgtgtttcttatgcacttgctgtatgaatctgtcaggttactggtcaaccaagtgtgctatattatgctgcgacaatccttcaggtactgatgcttttctgtatgaattacgtatttcagctatgtccttttgtggtgctatggttggctctcaaaaaatggaagcccctacatgttataagatgttaccccgtattgctcaagaatataaaaaataatgttattcttgtaaggtcaagtggggctcacgggacctccagacaccatgctttcatcgctttagttcctgtatttttcatagttgtcgtttttctttcatgcagagtgctggattctctggtgcatctgatgctactcgtgtatcagttcttcttggcttactgaaggtatatagtacttcttaatattagttcacatataacacacgctgatattttcaaactttaagctgttccatatttgccattcccctatgaatgaacatgaactagcaacaaattactacaatagtacaaactgatacacccataagagcaataacctgtaccactatttgtcttgatattattcgatacgacaacactaacgaaaaaaaggacacagctagcactcaggcattgagacggcagcaccaaatacctgatgacatgaccatcttgggaggatccccttttcctttttatgtgctgcatctcctctcctcttcatctaaaattaatttgtgcatccataaaagtgaagcttgtttgtttcaagtgttttgagtctccactagaatatcttaccatcccagcaaaaaaaaagagagagaatatcatcaccatgtaagccagagaaaaaacaacatcctttgtcacaaaaatactaacaccaccatgcaacatgcaagggctcatgatgcaacaatgagcaattactaattgtaaaaactatgaagtttcgcgcaacaaatcgatagacctactgccacaaataccaatttaacaaaacagtgagctagtgagctacatgtcctagctgcatcaattcagtgcaacaaatcaacattattgcagatacagttggttttggtgcaagaaataaagaaacatgaacatctacaacaaataactcttgtgactaattttgggaagacaagttgcaacaaataaatactctctgcatcatttcaactgatgttgtgtttcttttgtagttgattatgactggtgtggcagttcttgtggttgacagacttgggagaagaccattactgattggaggtgttagtgggattgtaagtctagcctcaacatatgcactcttatctaaatatgataaaagcagtcatgagcttcttcaataaatatcaattcaatcattcacatgctcgttttctctgttcaatgtgatacacaactgatatctcaatagaactgtatctccttattttctgaaaaaaagtacttaatcgtatattttcatgttcagttgtatgtttctgtggaacaaagtagcatcgaaatttgtagggatgagttgactataggtgctataggcatagttttcacatgatggtttgttcgtatttctgaaaaatgcagtgatgttcttttgagtgaaataatacaataatcttcaaggagattttgctgcctcactcaacttatctgttaattggtttaatgtgcaggctgtttccttgtttttgttatcttcgtactacaccttattgaaggatgctccttatgtggctgtaatagcacttctactctatgttggctgctaccaggtactcacagccagtttacccttgtttggcatgaatgaaaaaaaatagaaattttatgtagcaaagtttcagttgatattctgcccgtgtatatatatttggctatctgtctaatgataagttattctgcagctgtcattcggtccaattggctggcttatgatttcggaagttttcccattaaggctgcgagggcgtgggttgagtattgctgttcttgtgaattttgcctccaatgcactagtcacttttgctttctccccattggaggtatgtctcaagttggtttgtgcaatggagtgtacatgacatgccagccaagaagaggctatgtatgagtgtactgactgctcttatatatgtgactgtggtgtaggatttgattggaactgggatcctcttctctgcgtttggggtgattgcagtggcgtctcttgttttcatattcttcatcgtgcccgagacgaaagggctcaccttggaagaaattgaagccagcctgtagatccagctgccctgcggctgctggcacgtaggagaactgcttattattcagagatgttgcaagctgttggactgactgactgactatctttgtggtgtggtaaggtaacacagtgagatccattgagagtgagttatgttgctttcggtcgttgctttggttggagaaagagtatagttcaaacatatatgtccatactgggttgttgttcataatacatgagcacatcattttttttccttgagaacgatatatgtgtgattaatgctgtacagcaggagcagttggcttatgccatgttattgggcacctgctgaatatttggcatgatctaaaaataataatgtcttcgtcccagaataattacattt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0579200, RefSeq:Os10g0579200