BGIOSGA032140

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Revision as of 04:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032140| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032140, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA032140

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032140, complete gene.

LocusTag

OSJNBA0073L20.1

Ensembl Transcript ID

BGIOSGA032140-TA

Ensembl Protein ID

BGIOSGA032140-PA

Length

6099

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:7466884..7472982

Sequence Coding Region

7472151..7472982,7470748..7470867),complement(7468819..7468943,7468528..7468738),complement(7467942..7468179
,7467308..7467461),complement(7466884..7467204

Genome Context

<gbrowseImage1> name=IndicaChromosome10:7466884..7472982 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:7466884..7472982 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTACACGCGTGCTATTGTCGTCGAAGGTGATATTAGCACTAGTTCTCGCGTCCCTCTTCTCCCTCCCGCGCCATGGCCGCGCTCTGGAGCTCATGAACTGGTCATGCAACAACGGCAGCGCCTATGCCGCGAACACCACCTACGACACCAACGTCCACAGCATCCTCGCCACGCTGACCGCCCGCACACCCAATACTACCACCGGCTTCGCCACCGCGACCACTGGGCGCGGGACGGACACGGAGGCGTGGGGCCTCGCGCTCTGCCGCGGCGACACCGACCGCGTCGGGTGCGCGTCCTGCCTCGCCGCCGTGCCGGCCGTCGCCTTCAACGAGTGCCGGGGCGACATGGACGTGACCGTGTTCTACGACCGCAGCCTCGCCCGGTTCTCGTACGTGGACTTCACGGCGAGGCCCGACAACACGGAGGTCCTGATCGGGAGCCCTAGCGCGGACCGCATCACCGCCGACGCCGGCCACTTCGACGCGCTCGTGGCGGACCTCGCCGGCGCGCTGGCCGACTGGGCGGCGTACAACTCGACGTTGAGGTACGCCGCTGGGGTGATGACCTCCGGCGACGGCTTCATGTCGACGACGGAGGACATGGTGCACAACATCTACGGTGTGGTGCAGTGCACGCCCGACCAGGCGGCGGCGGCGTGCCGGGCGTGCCTGGAGGCGCTCAGGGTGGACATGCCCAAGGTGTTCGCTGGAAAGATGGGAGGGATGTTCAACGCGGTGTGGTGCAACCTTAGGTACGAGACCTTCGTCTTCTTCGACGGCGACCCTTCGGTGAAGCTCGTCGCGCCGCCAGTTGTTCCGGAGGATGGAAAGAGGAGAAGCAGCCCCGAAAATGCAGCAGCAGTTGTTGGAGCTGTCCTTGGTGCTTTAGTCATCCTTCTGTCTCTGTTCATCATTTACCTCTGGAAAAAATTACAAGCAAAACAATATGCTGCTGACAAAGATGTTGACTCAGGCTCACTTCTATTTGATCTGGCAATAATAAGAAAGGCAACAGCTAATTTTGCAGAACACAACAAGCTTGGGCATGGTGGATTTGGAGCAGTATACAAGGGGTTCTTGCCAGATGTAGGTGAAATCGCTGTGAAAAGGCTTGACAGGACATCGGGACAAGGCCTTGAACAGCTGAGGAATGAGCTCTTGTTGGTTGCCAAACTCCGGCACAACAACCTTGCAAAGCTTCTAGGTGTTTGCATCAAGGGAGATGAAAAGTTACTCGTGTATGAATTCCTGCCAAATCGAAGTCTCGACACTATCCTTTTTGACCCACAGAAGCGAGAACAATTAAGCTGGGAAACGAGATACCAGATCATACACGGGACAGCACGAGGCCTACTCTATCTTCACGAGGATTCCCAGATAAAGATCATACATCGCGACCTCAAGGCTAGCAATGTGCTGCTAGACTCCAACATGAACCCAAAGATATCTGACTTTGGCTTGGCGAGGCTCTTTAGTGGAACAAAAACTACAAGTATCACAAGCCAAGTCGTCGGGACACTGGGTTATATGGCACCAGAGTATGCAGTGCTTGGGCACCTGTCAGTCAAGGTTGATGTCTACAGCTTTGGTATCTTAGTATTGGAGATTGTGACCGGAAGGAGGAATACCGATGTGTTCGATGCAGACGAAGAATCTAGCAATCTACTAAGCTATGTATGGGATCATTGGCAGAAAGGGATACCACTGGAGATCACTGACACGTTGCTGCTGCTCAGCGGTAGCCGGGGTTTGCAGGACATGGAGCTGCTCAAGTGTGTCCACATCGGGCTCCTCTGTGTCCAGGAGAACCCGGCAGACCGGCCGACAATGCTGAGTGTCCTTGTCATGCTTCAGGATATTGACACCACCAATTTTGCTGCACCATCGAAACCGGCATTTACTTTTGCGAATGTTAGGAACACAACAAGCTCTAGCCCTAGCGCTGCCGCATTGTCCGCGAATGAAGTATCAATATCGGAGTTCCATCCTAGATAG</cdnaseq>

Protein Sequence

<aaseq>MATRVLLSSKVILALVLASLFSLPRHGRALELMNWSCNNGSAYAANTTYDTNVHSILATLTARTPNTTTGFATATTGRGTDTEAWGLALCRGDTDRVGCASCLAAVPAVAFNECRGDMDVTVFYDRSLARFSYVDFTARPDNTEVLIGSPSADRITADAGHFDALVADLAGALADWAAYNSTLRYAAGVMTSGDGFMSTTEDMVHNIYGVVQCTPDQAAAACRACLEALRVDMPKVFAGKMGGMFNAVWCNLRYETFVFFDGDPSVKLVAPPVVPEDGKRRSSPENAAAVVGAVLGALVILLSLFIIYLWKKLQAKQYAADKDVDSGSLLFDLAIIRKATANFAEHNKLGHGGFGAVYKGFLPDVGEIAVKRLDRTSGQGLEQLRNELLLVAKLRHNNLAKLLGVCIKGDEKLLVYEFLPNRSLDTILFDPQKREQLSWETRYQIIHGTARGLLYLHEDSQIKIIHRDLKASNVLLDSNMNPKISDFGLARLFSGTKTTSITSQVVGTLGYMAPEYAVLGHLSVKVDVYSFGILVLEIVTGRRNTDVFDADEESSNLLSYVWDHWQKGIPLEITDTLLLLSGSRGLQDMELLKCVHIGLLCVQENPADRPTMLSVLVMLQDIDTTNFAAPSKPAFTFANVRNTTSSSPSAAALSANEVSISEFHPR</aaseq>

Gene Sequence

<dnaseqindica>1..832#2116..2235#4040..4164#4245..4455#4804..5041#5522..5675#5779..6099#ATGGCTACACGCGTGCTATTGTCGTCGAAGGTGATATTAGCACTAGTTCTCGCGTCCCTCTTCTCCCTCCCGCGCCATGGCCGCGCTCTGGAGCTCATGAACTGGTCATGCAACAACGGCAGCGCCTATGCCGCGAACACCACCTACGACACCAACGTCCACAGCATCCTCGCCACGCTGACCGCCCGCACACCCAATACTACCACCGGCTTCGCCACCGCGACCACTGGGCGCGGGACGGACACGGAGGCGTGGGGCCTCGCGCTCTGCCGCGGCGACACCGACCGCGTCGGGTGCGCGTCCTGCCTCGCCGCCGTGCCGGCCGTCGCCTTCAACGAGTGCCGGGGCGACATGGACGTGACCGTGTTCTACGACCGCAGCCTCGCCCGGTTCTCGTACGTGGACTTCACGGCGAGGCCCGACAACACGGAGGTCCTGATCGGGAGCCCTAGCGCGGACCGCATCACCGCCGACGCCGGCCACTTCGACGCGCTCGTGGCGGACCTCGCCGGCGCGCTGGCCGACTGGGCGGCGTACAACTCGACGTTGAGGTACGCCGCTGGGGTGATGACCTCCGGCGACGGCTTCATGTCGACGACGGAGGACATGGTGCACAACATCTACGGTGTGGTGCAGTGCACGCCCGACCAGGCGGCGGCGGCGTGCCGGGCGTGCCTGGAGGCGCTCAGGGTGGACATGCCCAAGGTGTTCGCTGGAAAGATGGGAGGGATGTTCAACGCGGTGTGGTGCAACCTTAGGTACGAGACCTTCGTCTTCTTCGACGGCGACCCTTCGGTGAAGCTCGTCGCGCCGCCAGTTGTTCCGGAGGATGGTATGAACTTCGCCTCGTGTAAAATTATGATAGACCTCACATCGTCCTGCACTTTTCACATAATCTCGAGAACAGTAATGTTGTTTTTGTTTTCTACCCCTTCGTCCCATAATAAAGTAGCATAGCATCGGATGAGACATTTCGTTGTACAACCAATTTGGACAGAACGGTGTCTGATTCGTTATAATTATATCTGAAAGTTTTTAGATAACTTTTATGTTAAAAGTTATATATAGGTAGTTCCTTTTTCAAGAAAAATAATACTAGTTTAATTTCCTTCCATGGCTTTCTTGTCACTGGCCGGATCATGGTATAAATATACTCTCTCCAGTCACAAATACTTCAAATTTTGAATATAATATATCTGCTCAAACTTTTGGAAGAACCATCAATAACTTAAATGTATACTTAGTTTTGAAACAAATAAATGGGTGTAGATTTGCTTTGGAAAATTCTACCGTAATCCTATAAACATATTGAAACATTTTAAGCTAATTCTAATATAAATTATAGTTACGGGCTCAGTTACATCTCAAATATTATAAACAAAACATCAAGTATTTTTGACTAGACGGAGTTTTAAAAAGACGACCAACAGCCAATACAATTAAACCACTGGTCCAAACAGCTCTGATTCAGTAATAATAAAAGAGATAGCGCACGAGACTTAAAAGTGGATGGATGTGGAAGATAAGGGTTTATACATGTTTTGATGGATTTTATCTGCCGGATATATTGCTCATGGTGATCTTGCGGTATTGTTTATGTCGATGTGCCCTTTGAGGGGACTCTCTGCGTGCCTTATATAGGTTGGGGGCAAGGTTACAAGTAGAAAGTCTAGGCGAATACAACTTTGATTATCTTATCTGTATATAATAATATGGTAGTATTTAGCTTGGACCCTATACTCTACCTTGGGGATAAAAGGTAACATGACAACCGAGTATTACTTTATCTTATATTATATGAATGCAGTCTGCCTCTTATATATAGTCGGATATGTACGCCTTGTGGATATCCACTACCCATATTCTTTAAGAATGCAATGTACTGTGGCAGTATGATATTATTTTAGTATTTGTAATTTCTTTTTGGAAAAGACCAGTGGTTGAAGTTTCAAAATGAATAGCATCCATTATAAGTTATTTTGAAACGGATGGAGTATATGGCAGGTGGTTTTTAGCTAGTCATGTTAGTGTGTTTCACTTTAAAAAAGAATCCAATGTCTAGCGTGGGTTTGCTCTGATTGTCCAGACATAACGTGGCGTTACACTTAACTGCAGGAAAGAGGAGAAGCAGCCCCGAAAATGCAGCAGCAGTTGTTGGAGCTGTCCTTGGTGCTTTAGTCATCCTTCTGTCTCTGTTCATCATTTACCTCTGGAAAAAATTACAAGCAAAACAATGTGAGTTGAGTTTGAGTATTTTGTGTAAGCAACATGCATCTTCTGGTGATTTCTTCTGCAATTTCTATTGGAAATGATTAACAAAAAAAATACATGGTCAACCAAATTGCAACAAGCTGAGCCAAATTAGATTAGATAGATAGATAGATAGACAGACAGACAGATAGATAGATCTCCCAAGTCCTAATTGCCTTGTCCAACTGAGGTCCATCCATGGACTTAGTACATCATGGGGTACAGATTATAGTGGAGCATAACTGAAAATATATGGATCTTCATCGAGTCCAACAAGCTACATCAAGCATAGGGCTGGCGAATTGTTACAATAGACAAATAAAAACTGCCATTAGACAGATAAAAACGACAAAACATAAAAAGTCACCAACTTAAGAACTCCAAAGCTAGTTCACAGCCTGGAAACTACTGCTACGTACGTCATAAAAACATGATCAATCTAAACCAAAATCTAAAATCATGATGACTCCTAAACAATGGAGAATTAACTTATTTAACTTAACTGCATCCTAGATATGTTTTGGTTGGATCAAATCAATCAAATTTGTACTATAACACAAAATCAACAATTTACGCAATACTGAGCAAAAATAAAAAGATATGAAAGAGCAGTACTTCTTATTGTGGGAAGATAATATTTATCATATCAAGATGTTTACAAGGTGAATCCACTATAGTAGTCAAACATGCATGGAGTAAACCCTAGCAACTATGTATTCTCGTTGTATAGTGTTTATATATACCTAATCAGACTATAAGGAATTAAGCCTTGAAAATTACATCTCTATCAGGATATCCTATTAGCAAGTTTCCACACATATATTCCAATCCATATCCAAATTTTCCATAATACACACATTTCTCATATATGCAATACAGAAACATCTCCTTCATCTGCACCGTATTCAAGATTGAGCATCCTGCGTGATATGCTTAACCTAGTAGACCTCAACTATCTTTGAGTCTAAATCCGATCCGTATCGGTGCCCACGCTCTATATGTTCCAAGCAAAGCCTACATATAGGACCGTTTTCCATGCATAAGTACTCTTCCCAACTTAATTAAAACTAGCACAAATGTAGTACATGTAACATACACAAACCATTAGACATTATCCACAACGCATAAACACAAAAATGAACGTGGATTTCCAAAAGTCCAACCTAAATGATGAGCTGAACAATCTGGTGTGCAGTTCAACATACCACTCGGCGGCCAGTTTGGTCACCACATATTTTTTTTTAGTTAACAACATGGTTCAAATGGTCCAAGAGTGGTTGTGTATGTATAGAACCTTGGTTGTGGCTCTAGTTGGATGCATGCCCATTGAGGCTGAAGCCTTGAAACTAGAAGTTTTGTTCCCATGTCGCGGGGACCTACTCATGGTGATAGTGACTTGAGCCAGTCATGCTAACATAAGTGATACTAGAAGTTAGGTCATATATGAATTGTGCAGACACTGTTGTGTTACATGCAGTCGGTTTAGTCCGGCCATTTGATTTTGGTTATGGGGTAGGACAACATAAAAGGTAGAAGCTAGTTTTTAAGTTTTGTAAGCTTAATATCTTGGTTAGGACAGGCCCACTAAGATATAGGCCTAGAGTGTTGTTCTAGAGTCCTGTCGAGCCACCTGTGTGTTTTGATTGGGTAACCAGAAAAAGTAAGTTGTCCATGACGCACATACAAAATATTATGATAAAACTACAAAGCGCGAAGACAATGTTTGAACATCGACGTATTCATAATTCATGCCTATCTAGAATGTAATGTGTTTTTAATTATAATGCAGATGCTGCTGACAAAGATGTTGACTCAGGCTCACTTCTATTTGATCTGGCAATAATAAGAAAGGCAACAGCTAATTTTGCAGAACACAACAAGCTTGGGCATGGTGGATTTGGAGCAGTATACAAGGTTTACACATCTTGTTACAGTATATGATATGAAACTACCATGGAAATGTCTATTGATATGATATGAACCATTAATTTCAGGGGTTCTTGCCAGATGTAGGTGAAATCGCTGTGAAAAGGCTTGACAGGACATCGGGACAAGGCCTTGAACAGCTGAGGAATGAGCTCTTGTTGGTTGCCAAACTCCGGCACAACAACCTTGCAAAGCTTCTAGGTGTTTGCATCAAGGGAGATGAAAAGTTACTCGTGTATGAATTCCTGCCAAATCGAAGTCTCGACACTATCCTTTTTGGTAAGACCATATACACATACTATCAATACATTTACTATACAATTATTATTCTATGCTGCAAGAATCATCATTAAGTTGACAACTATTACTATAGCTTATTATTCTCTGCTATGGGGTCCCTCCTGTCACAAATGTTCGACATTTGGACTACTACGTCCGGTCAAACTTTTAAAACGTTGACGACCGTTGAATTTCGAACTATTTATTTTTTACTTGAAAAGTGCATAATTTATCTCCTAAACATATAGGGTTGATAAATTTTTTTCTAATGAACATAGTAAAATTCAAACAAGAATTATTTTTGAACATGTTTTGCATGCGTGAACTTTTTTTTTTTTTACCTAGCAGACCCACAGAAGCGAGAACAATTAAGCTGGGAAACGAGATACCAGATCATACACGGGACAGCACGAGGCCTACTCTATCTTCACGAGGATTCCCAGATAAAGATCATACATCGCGACCTCAAGGCTAGCAATGTGCTGCTAGACTCCAACATGAACCCAAAGATATCTGACTTTGGCTTGGCGAGGCTCTTTAGTGGAACAAAAACTACAAGTATCACAAGCCAAGTCGTCGGGACACTGTAAGAACAAATGATCGATTGTGAAAAATTCCTTCATTCCTTACTAGGGTACTCTATTTCGGTATTGAAAACATTTCTCGGTGGGTAGAAAATTCTGATTTTTTATATTTTCAGTATGTTGAACAAAAAGATAAGTTTAAAAAACTTTCGATTAAATTTAACCAGGTATTTGCTAAATTTAAAAATTGAAGTGTTCTTTGAGAAAAAACAACCAACTGGGATGCACCAATAAAGACAATGTTTGCGAATTTTGAAAATTGTCAAGTATATTCCATAAATGTTTTATCCTCTTTGTTTCATGTATTAGTAACTTTAGTCACATGGAAGTTACCTATATATCCAATAATATGTTGGTTATAGTATAATTGAACAAAATTTTATGAATAAATAGGAATAGAAACTTGCGTTAAGATGCAGCTGCTAGGAGATAGTCACATTGCTTCTCATTTTAGGCATTGACACTGTAACGAATGCATACAGGGGTTATATGGCACCAGAGTATGCAGTGCTTGGGCACCTGTCAGTCAAGGTTGATGTCTACAGCTTTGGTATCTTAGTATTGGAGATTGTGACCGGAAGGAGGAATACCGATGTGTTCGATGCAGACGAAGAATCTAGCAATCTACTAAGCTATGTGCGTCCTATTGATCAATTATTCTATGATTTCCTTAAAGTAATGGCATTTTTCATGTTGAAAGTACTCATCAATCTACGGACTAAACCTTGTGATGTTTCAGGTATGGGATCATTGGCAGAAAGGGATACCACTGGAGATCACTGACACGTTGCTGCTGCTCAGCGGTAGCCGGGGTTTGCAGGACATGGAGCTGCTCAAGTGTGTCCACATCGGGCTCCTCTGTGTCCAGGAGAACCCGGCAGACCGGCCGACAATGCTGAGTGTCCTTGTCATGCTTCAGGATATTGACACCACCAATTTTGCTGCACCATCGAAACCGGCATTTACTTTTGCGAATGTTAGGAACACAACAAGCTCTAGCCCTAGCGCTGCCGCATTGTCCGCGAATGAAGTATCAATATCGGAGTTCCATCCTAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032140