Os10g0579800

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Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0579800| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001072042.1 GI:115483679 GeneID:434951...")
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Gene Name

Os10g0579800

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001072042.1 GI:115483679 GeneID:4349517

Length

2778 bp

Definition

Oryza sativa Japonica Group Os10g0579800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23584436..23587213

Sequence Coding Region

23584507..23584827,23584912..23586306

Expression

GEO Profiles:Os10g0579800

Genome Context

<gbrowseImage1> name=NC_008403:23584436..23587213 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23584436..23587213 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcatgaataatatgatgggtagtccaccaagtcgtagcaggggcagggatgagaagaagaagaggtggaagtggaagcttgggccggccaccatcctggggttcgagctgctggagagcatcgccttctccggcgtggcgctgaacctggtggtgtacctggccaccgtccttcacggcaccctcgccttcaacgccgcccatgtcgacacctggaatggcaccaccttcatcgtccccgtcatcggggctttcctcgccgactcctactggggaaagtacaggaccatcctcgcctccctcctcttctacctcgccggccttgtgctcctcaccgtctccgccgctgtcccctccctgcgcccggcgccgtgcaccggcgtcccatgctcaccggccaccgggacccagttctccgtcttcttcctcgcgctctacctcacctccatcggaacaggcggcgtcaagtctgcgctgctccccttcggggcagagcagtacgagcgcgacgaccacgacactgatcaggagggcgccccggccccggagaagacgaagcaatccttcttcagctggttcttcggcgccatcaacctcggcatcttcgtggccgggacgcttgtatcgtgggtggagcagaacgtgtcgtgggcgctgggcttcggcatcgccacgctctgcctgctcatcgcgtcggcggcgttcctggcagccacgccctgctacagggtgcgcctccccacgggggacacccccatcaaggccatcctcagggtgctggtggccgccttcaggaacaggacccggacgctgcctcccgacgccgacggcgatggcctgtacgaagtcgacgacgacaagaacaagaacggcggcgatgatgagaagctggcgcacaccgaggggttacggtggctggacaaggccgccgtgagggtggacgggggcggcgtgtgggaggtgtgcacggtgagcgaggtggagcgcgtgaaggtgctggcgcggatagtgcccatctgggtgacgtgcgtgctgtacgcggcgtcgctggggcagatgaccaccaccttcatccagcaggggatggccatggacacgagggtgttcggggggaggttccgggtgccggtggcgtcgctggtgtcggtggaggtggtgttcatgctgctgtgggtgctgctccacgacgtggtggtgatgccggtggcgaggaggtggtggcgctcgggtggtctgacgcagctgcagcggatgggcgtggggcgtgtgctggtggtggtggccatggcgacggctgctctggtggagaggcggaggctgcgaggggagaagcggtcgatgagcatcttgtggcaggtgccacagttcgtggtgctggctggatccgacgtgttcagcggcatcgcgcagctggagttcttctacggcgaggcgcccgggtccatgcgcagcatctgctccgctttctccttcctcgccctctccctcggcttctacgtcaactcgctcgtcgtcaccatcgtggcggcggtcaccaagaggagcgacggctccggcggctggctggcgccggacctggacacggcccacctcgactactacttctggctctgggccctcatcagcctcgccaacctcgccctctacctgctgctcgccgcccgctacaagtccaagaagccctcgccaccgcattcttcttctcatccctag</cdnaseq>

Protein Sequence

<aaseq>MSMNNMMGSPPSRSRGRDEKKKRWKWKLGPATILGFELLESIAF SGVALNLVVYLATVLHGTLAFNAAHVDTWNGTTFIVPVIGAFLADSYWGKYRTILASL LFYLAGLVLLTVSAAVPSLRPAPCTGVPCSPATGTQFSVFFLALYLTSIGTGGVKSAL LPFGAEQYERDDHDTDQEGAPAPEKTKQSFFSWFFGAINLGIFVAGTLVSWVEQNVSW ALGFGIATLCLLIASAAFLAATPCYRVRLPTGDTPIKAILRVLVAAFRNRTRTLPPDA DGDGLYEVDDDKNKNGGDDEKLAHTEGLRWLDKAAVRVDGGGVWEVCTVSEVERVKVL ARIVPIWVTCVLYAASLGQMTTTFIQQGMAMDTRVFGGRFRVPVASLVSVEVVFMLLW VLLHDVVVMPVARRWWRSGGLTQLQRMGVGRVLVVVAMATAALVERRRLRGEKRSMSI LWQVPQFVVLAGSDVFSGIAQLEFFYGEAPGSMRSICSAFSFLALSLGFYVNSLVVTI VAAVTKRSDGSGGWLAPDLDTAHLDYYFWLWALISLANLALYLLLAARYKSKKPSPPH SSSHP</aaseq>

Gene Sequence

<dnaseqindica>72..392#477..1871#gctgcctcgtatcgtgaaatgagatactagctagaaaggtggtggtaggggatagatccggggcgggcggcatgagcatgaataatatgatgggtagtccaccaagtcgtagcaggggcagggatgagaagaagaagaggtggaagtggaagcttgggccggccaccatcctggggttcgagctgctggagagcatcgccttctccggcgtggcgctgaacctggtggtgtacctggccaccgtccttcacggcaccctcgccttcaacgccgcccatgtcgacacctggaatggcaccaccttcatcgtccccgtcatcggggctttcctcgccgactcctactggggaaagtacaggaccatcctcgcctccctcctcttctacctcgccgtaagtcattcgctctttcatactcgatccgatccatacatgcagcatggagatggataacgtaccagggcgggccttgtgcagggccttgtgctcctcaccgtctccgccgctgtcccctccctgcgcccggcgccgtgcaccggcgtcccatgctcaccggccaccgggacccagttctccgtcttcttcctcgcgctctacctcacctccatcggaacaggcggcgtcaagtctgcgctgctccccttcggggcagagcagtacgagcgcgacgaccacgacactgatcaggagggcgccccggccccggagaagacgaagcaatccttcttcagctggttcttcggcgccatcaacctcggcatcttcgtggccgggacgcttgtatcgtgggtggagcagaacgtgtcgtgggcgctgggcttcggcatcgccacgctctgcctgctcatcgcgtcggcggcgttcctggcagccacgccctgctacagggtgcgcctccccacgggggacacccccatcaaggccatcctcagggtgctggtggccgccttcaggaacaggacccggacgctgcctcccgacgccgacggcgatggcctgtacgaagtcgacgacgacaagaacaagaacggcggcgatgatgagaagctggcgcacaccgaggggttacggtggctggacaaggccgccgtgagggtggacgggggcggcgtgtgggaggtgtgcacggtgagcgaggtggagcgcgtgaaggtgctggcgcggatagtgcccatctgggtgacgtgcgtgctgtacgcggcgtcgctggggcagatgaccaccaccttcatccagcaggggatggccatggacacgagggtgttcggggggaggttccgggtgccggtggcgtcgctggtgtcggtggaggtggtgttcatgctgctgtgggtgctgctccacgacgtggtggtgatgccggtggcgaggaggtggtggcgctcgggtggtctgacgcagctgcagcggatgggcgtggggcgtgtgctggtggtggtggccatggcgacggctgctctggtggagaggcggaggctgcgaggggagaagcggtcgatgagcatcttgtggcaggtgccacagttcgtggtgctggctggatccgacgtgttcagcggcatcgcgcagctggagttcttctacggcgaggcgcccgggtccatgcgcagcatctgctccgctttctccttcctcgccctctccctcggcttctacgtcaactcgctcgtcgtcaccatcgtggcggcggtcaccaagaggagcgacggctccggcggctggctggcgccggacctggacacggcccacctcgactactacttctggctctgggccctcatcagcctcgccaacctcgccctctacctgctgctcgccgcccgctacaagtccaagaagccctcgccaccgcattcttcttctcatccctagccactaccactatcatctccttcttcttcctccaccattaattgttcatccatcatcatcatagacataccatatatacgcacgcatatctcatctcatctgtaagatggatcatacatagtctgcagcagtgcatcttgtatctttctacctatagcctatagtttgcttctgaatttaacatcggaatccagggaattgaactgacgacaaacttttctgcatacgatcgaattggtagcttttgggcagaaacagccgtttttttgacaaattgacccttttcaaaaacttatttcgaaactaacccctgctaaaaacttcaactaaaactaggccgtcggctcagcgccaagcgcattggcgctgaggttggccgtgtcagcgccaacgggactggcgctgacattgtgccaccgtggcggccgggccgatcccccagctgacgtggcagctacctcagcgccaaccgcttcggcgctgaggtgcccaacatcagcgccaagtacgttggcgctgatcttggctactttgagcccggccgaggccgccccagccagttagtcctctgtttttccccagccgcccgcctagggttcggtcgccaccgcgttctcctcgcccaatctcccccaaaaacctctctaatcgaaggtgatttgtgtggcattgagtttgggatcggaagagaaggtaaacccctctataaaccctaagttccccaaagttttattggatattttgtattgttttggttgtagacgtggtttgataatagttggctaaggatggattattagatggataatgtgggtggggatgaagtgtggaggtggcatatctttatccatttggttgttgttgatacatttgacaaaatatatttgggatgaatgtttggtgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0579800, RefSeq:Os10g0579800