Os10g0580300

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Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0580300| Description = Protein kinase-like domain containing protein| Version = NM_001072044.1 GI:115483683 GeneID:4349519| Length = 4342 b...")
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Gene Name

Os10g0580300

Description

Protein kinase-like domain containing protein

Version

NM_001072044.1 GI:115483683 GeneID:4349519

Length

4342 bp

Definition

Oryza sativa Japonica Group Os10g0580300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23604167..23608508

Sequence Coding Region

23604297..23604371,23604461..23604667,23604980..23605088,23605202..23605234,23606121..23606168
,23606291..23606368,23606454..23606538,23606632..23606665,23606959..23607053
,23607139..23607208,23607430..23607528,23607617..23607659,23607806..23607909
,23608015..23608125,23608210..23608446

Expression

GEO Profiles:Os10g0580300

Genome Context

<gbrowseImage1> name=NC_008403:23604167..23608508 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23604167..23608508 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggacggccgcgtcggaggtggaacgaatcggccggcatggctgcagcaatacgaactagtgggcaagattggcgaggggacctacggcctcgtcttcctcgctcgcctcaaacaatcgcatccccacgctgccgctggcgttggccgccgtggctctcccatcgccatcaagaagttcaagcagtccaaggagggcgacggtgtctcgcccaccgccatcagagagatcatgcttctgcgtgagatcaaccacgagaatgttgtcaagctcgtcaatgttcacatcaaccacgccgacatgtccctctacctcgccttcgattacgccgagcacgatctctatgagattatcaggcatcacagagagaagcttaacctccccataaatccctacacagtcaaatctttgctctggcaactgctcaatggtctcaactatctccatagtaactggattatccatcgagatctcaagccttctaatatactggtcatgggagaaggagaagaacatggaattataaagattgctgattttggactcgctaggatatatcaagctccattaaagccattaagtgataacggggttgttgttaccatctggtatcgggctccagagttgttacttggggcaaagcactacacaagtgctgttgatatgtgggcagttggttgcatttttgctgaattgcttacactcaaaccactgttccaaggtgttgaagccaaagctactccaaacccgtttcaacttgatcaactagacaagatttttaaggtcttaggtcatcctaccgttgagaaatggcctaccctcgctaatcttccatgctggcaaaacgatcaacaacacattcaagggcataagtatgagaacacaggacttcataatattgttcacttgcctcagaagagtcctgcgtttgatcttctctcaaaaatgctcgagtatgatcctcgaaagcgtataacagctgcgcaagctttggaacatgagtactttcgaatggatcctctgcctggacggaatgcacttttaccatcgcaggctggagagaaaattgtgcaatatcctgtgcgtccagttgataccacaactgattttgaaggaacaacaagccttcaaccaactcaagcgccatcagggaacgcagctcctggcaaccagtctgtggtaccgagacccattccgaggcaaatgcaacaacccatggtcggtatgtcgagaatgggtggtacaaacatggcggcctttggtgcagctccgcaaggaggcatagctgggatgaatcctggtaatattccaatgcagaggggcgctggagcccaatctcatccgcatcagttgagaaggaaagctgatcaagggatggggatgcagaaccccggttatcctactcaacagaagaggcggttctga</cdnaseq>

Protein Sequence

<aaseq>MGDGRVGGGTNRPAWLQQYELVGKIGEGTYGLVFLARLKQSHPH AAAGVGRRGSPIAIKKFKQSKEGDGVSPTAIREIMLLREINHENVVKLVNVHINHADM SLYLAFDYAEHDLYEIIRHHREKLNLPINPYTVKSLLWQLLNGLNYLHSNWIIHRDLK PSNILVMGEGEEHGIIKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYT SAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPFQLDQLDKIFKVLGHPTVEKWPTLA NLPCWQNDQQHIQGHKYENTGLHNIVHLPQKSPAFDLLSKMLEYDPRKRITAAQALEH EYFRMDPLPGRNALLPSQAGEKIVQYPVRPVDTTTDFEGTTSLQPTQAPSGNAAPGNQ SVVPRPIPRQMQQPMVGMSRMGGTNMAAFGAAPQGGIAGMNPGNIPMQRGAGAQSHPH QLRRKADQGMGMQNPGYPTQQKRRF</aaseq>

Gene Sequence

<dnaseqindica>4138..4212#3842..4048#3421..3529#3275..3307#2341..2388#2141..2218#1971..2055#1844..1877#1456..1550#1301..1370#981..1079#850..892#600..703#384..494#63..299#ggcgggttcggctggatcttttgttcccccttttcctttcttctccggcagcggcggcggcgatgggggacggccgcgtcggaggtggaacgaatcggccggcatggctgcagcaatacgaactagtgggcaagattggcgaggggacctacggcctcgtcttcctcgctcgcctcaaacaatcgcatccccacgctgccgctggcgttggccgccgtggctctcccatcgccatcaagaagttcaagcagtccaaggagggcgacggtgtctcgcccaccgccatcagagagatcatggtaccttcctcagggagatccgctttccctactcctccctgccataccaaaccctaactaatcactagtcttctcctcttgcagcttctgcgtgagatcaaccacgagaatgttgtcaagctcgtcaatgttcacatcaaccacgccgacatgtccctctacctcgccttcgattacgccgagcacgatctctatgtaagcagcaacgcccatctccaatcttctctcttatctattgtacagtagtaatcatttgtttactccagttaacagctaatgaacctatgaaacatatcacaggagattatcaggcatcacagagagaagcttaacctccccataaatccctacacagtcaaatctttgctctggcaactgctcaatggtctcaactatctccataggtatcgtttacttcttaagttatcatgatgagtgatatgtaaaaactggagcctaacctagcacatggaactttttttgctgggatcctagcttattctgattttgtctccaaaaagaaatctaaaaattgatttcccttcctcagtaactggattatccatcgagatctcaagccttctaatatactggtatgttgtcatatgctaccttttgatgtacaactctgtcaatcttgcttttcctggctcaccggattaggatgatgtgccccaataggtcatgggagaaggagaagaacatggaattataaagattgctgattttggactcgctaggatatatcaagctccattaaagccattaagtgataacggggttagtacatccatctgtgtgcccattagcatgtttgctgctgtcttgtgtttatttcaaggcatataagggcaaaaaatggtagttatttgtaaaactactgcttgtttcctcttttttgtgatgaaccttcatatgctcatctgttcctttccttttttgtggaagcatttaatgtgttatcaatacccacaagtatatggctaaccaataatttccaggttgttgttaccatctggtatcgggctccagagttgttacttggggcaaagcactacacaagtgctgttggtatccttgctggagattgaaatgatatctttcgaccatcttttttcgctttattcacttcagctatttccttaatcaactctagatatgtgggcagttggttgcatttttgctgaattgcttacactcaaaccactgttccaaggtgttgaagccaaagctactccaaacccgtttcaagtatgggcattcacactcaagtaattgctatcgttaccttgtattcagaatcaattactagatactagactaagactgcgacattttacgttttctatgtgatgcttaatttcaagtaaagatattatcactcttgcctggaaccttcctaaaagtaaataggcagttgataattgtatgttgttgcattttatatatcctgctgtattacattttgtagaatatccatgctatgtatgccattcatttgccatttatttttatctcacagttgatttgcccatgtcttgtagcttgatcaactagacaagatttttaaggtcttaggtatggatgactcatttctcattctgactatttgattgtgtactcttcctgagataatatatgctctaggataataatataattattctccaggtcatcctaccgttgagaaatggcctaccctcgctaatcttccatgctggcaaaacgatcaacaacacattcaagggcataagtagtatgtcatgcattgttaagctgcttttaaaaacctgtgaaaatagcatttatctttccttgaggaaatagtttctcccttgcagtgagaacacaggacttcataatattgttcacttgcctcagaagagtcctgcgtttgatcttctctcaaaaatgctcgagtatgtaactggccttttggcctgctataaatccaacataaccttggatgattatcatttcttacattcatcttttgtactactaaatgttgttttaataaccttatatattcctgtttcaggtatgatcctcgaaagcgtataacagctgcgcaagctttggaacatgagtaagtaactacatccctccatttattcattattccttttttgcctagttggatacttcttatgttctcagtgtacagcaagtgcgatctggagttctaattgcttccctgaatctagtttagcaaccatgcaagaaaaacagttatgctttatttgcacgaggttttgatacttggacgaggtcttgatggtcctcagttggagctgattttgtggggtgggctggagtggtggtggtagtggtgtggcttaaagggtgtaaaattgccaagaccatctgtttagagtggctaacggtcaatttttccttgtaaatatttgtgcatcctaaaccttatatattttactttaaaaatataaatatatgcaatccttagtttgattcgctatacttctaaatgttttcatctctagtggcttggatgaaggtttaatgctgaaaactcgaggaaatactactttcgttgtggtgctattgtttattactccctctgtttctttttgtaaggctataggccctctgtttctttttgtaaggctatagtcttccctcttcctctgtttctttttgaaaggcctagagttttttcaatcattttgcaaaatataaggcttgcatgttggtattgaatttttttttctttatgtgcccacaattattacatagtctctctcccacatttataagaagcatcttactaaccatctccacacctattcttgaggtattttagtatggtggcatggtcatttgaactcttctttctcttggttttccaccctccctaatcatttttgcccactcagaataagacttgtaattttaaatggagggagtatgatttactacagcaatccttctgaacaacccttttctgttgataggtactttcgaatggatcctctgcctggacggaagtaagttatgtgtaatcagggtcttaatatactttccctaacttgcaactcttaaacatttggctttacatttcctccacaaatgaagatgactaaaatctttctctggtcagtgcacttttaccatcgcaggctggagagaaaattgtgcaatatcctgtgcgtccagttgataccacaactgattttgaaggaacaacaagccttcaaccaactcaagcggtaatggatttctgtccctgtgccacctttttaccaagacttatcagtattacttagtattgggaagcgatatacagaatatgcattttctttggtcaattatctaagttctttatacagttggcaaaaatatcgtgctttagggcatattcaattggtcaaaacaagtcgatacatggttttcaatgccatcaaagatttggtccagtgtgatttaaggaacccaactccatgttggcacattttcttgcagaattgattcgggttgctttatgaggtgcatttttataatgttgtacatttgtatttcagccatcagggaacgcagctcctggcaaccagtctgtggtaccgagacccattccgaggcaaatgcaacaacccatggtcggtatgtcgagaatgggtggtacaaacatggcggcctttggtgcagctccgcaaggaggcatagctgggatgaatcctggtaatattccaatgcagaggggcgctggagcccaatctcatccgcatcaggtaaaaactgctgccttggaagtaaatgttgcttggaaaaaggcctgtgacaaatgcaacatttgattggcttttgatatgtgcaacagttgagaaggaaagctgatcaagggatggggatgcagaaccccggttatcctactcaacagaagaggcggttctgaccgactgaatttgtaattgtatatctatttggtgtgttacttgtgagcacgcttagcttttgcggtggttgctcctagtcgtacagtgagaattgtatctgttctgttgtaattgaacgccatcacaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0580300, RefSeq:Os10g0580300