Os10g0580400

From RiceWiki
Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0580400| Description = Similar to Urea active transporter-like protein| Version = NM_001072045.1 GI:115483685 GeneID:4349520| Length = 2705...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0580400

Description

Similar to Urea active transporter-like protein

Version

NM_001072045.1 GI:115483685 GeneID:4349520

Length

2705 bp

Definition

Oryza sativa Japonica Group Os10g0580400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23612156..23614860

Sequence Coding Region

23612258..23612440,23612556..23613326,23613404..23614615

Expression

GEO Profiles:Os10g0580400

Genome Context

<gbrowseImage1> name=NC_008403:23612156..23614860 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23612156..23614860 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcggcgtgtgccctcctgcggagctggggttcggggcggagtactactcggtggtgaacggggtgtgcagccgcgccggcagctacttcggcggaaggccggtgctcacgcaggccgtcgggtacgccgtcgtgctcggcttcggcgccttcttcgcgctcttcacctccttcctggtgtggcttgagaagcgttacgtcgggtcgcagcacacgtcggagtggttcaacacggcggggcgcagcgtgaagacgggtctgatcgccagcgtgatcgtgtcgcagtggacctgggccgccaccatcctgcagagctcgaacgtggcatggcagtacggggtgagcgggccattctggtacgccagcggcgccaccatccaggtgctcctcttcggcgtgatggccatcgagatcaagcgcaaggcccccaacgcccacaccgtctgcgagatcgtccgcgcccgatggggcacccccgcccacctcgtcttcctcaccttctgcctcctcaccaacgtcatcgtcaccgccatgctcctccttggcggctccgccgtcgtcaacgccctcaccggagtcaacgtctacgccgccagcttcctcatcccgctcggcgtcgtcgtctacacactcgccggcggcctcaaggccaccttcctcgccagctacatccactccgtcgtcgtgcacgcggtgctcgtcgtcttcgtcttcctcgtctacacctccagctccaaactcgggagcccgcgtgtggtgtatgatcgcctcatggccgtcgccagcgccgcgcgcgactgctccgccgacctctcgcgcaacggccaggcgtgcggccccgtcgccggcaacttcaagggctcctacctcaccatgctcagctcgggggggctcgtcttcggcatcatcaacatcgtcggcaactttggaacggtgttcgtagacaacggctactggatgagcgccatcgccgcccggccatcctccacccacaagggctacctgctgggcggcctcgtgtggttcgccgttcccttctcgctggccacctcgctcggcctcggcgcgctcgccctggacctcccgctcaccgccgccgaggcagccaagggcctggtgcccccggccaccgcaacagcgctcatgggcaagtccggctccgtcctgctactcaccatgctcttcatggccgtcacatccgccggctccgccgagctggtggccgtctcctccctctgcacctacgacatctaccggacgtacctcaacccgggcgcctccggcaagcagatactccgcgtgtcgagggccgtcgtgctcggcttcggctgcttcatgggggtcctcgccgtggtgctcaacgtggcgggggtgtccctggggtggatgtacctggccatgggagtcattgtgggatccgcagtcatccccatcgccctgctgctgctgtggagcaaggccaacgcggtgggcgccatgggcggcgcggtgtccggctgcgcgctgggcgtggccgtgtggctcacggtggccaaggtgcagtacgggcgcgtgaacctggacaccacaggtcggaacgcgccgatgctggcgggcaacctggtgtccatcctggtgggcggggcggtgcacgcggcgtgcagcctgctgcgcccgcagcactacgactgggggaccagccgggagatgatcaccacggtggagagcgtgcatgccgcgctggacgacgagctcaaggaggagcgcctggtgcacgccaagcgttggatcgtcaggtggggcctcgtcttcaccgccgtcatcgtcgtggcgtggcctgcgctgtctctgccggcgaggaggtacagccttggctacttcacgctgtgggccgcggtggcgatcgcgtgggggactgtgggctcggtcgtcatcatccttctgccggtggccgagagctggaccaccatcaccaaggtctgcgccggcatgttcaccaacgacgctgtgtacgaccgcctcgacgacgtcaacctccgcctccgcgccatcatgggcgccatgcccgaggctgagaagcgctaccgccagctacacgagacggagatgcaccctgccggaacccatccggccaacgacgacgacgacgacaataataataatcagatgatgcactcctga</cdnaseq>

Protein Sequence

<aaseq>MASGVCPPAELGFGAEYYSVVNGVCSRAGSYFGGRPVLTQAVGY AVVLGFGAFFALFTSFLVWLEKRYVGSQHTSEWFNTAGRSVKTGLIASVIVSQWTWAA TILQSSNVAWQYGVSGPFWYASGATIQVLLFGVMAIEIKRKAPNAHTVCEIVRARWGT PAHLVFLTFCLLTNVIVTAMLLLGGSAVVNALTGVNVYAASFLIPLGVVVYTLAGGLK ATFLASYIHSVVVHAVLVVFVFLVYTSSSKLGSPRVVYDRLMAVASAARDCSADLSRN GQACGPVAGNFKGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWMSAIAARPSSTHK GYLLGGLVWFAVPFSLATSLGLGALALDLPLTAAEAAKGLVPPATATALMGKSGSVLL LTMLFMAVTSAGSAELVAVSSLCTYDIYRTYLNPGASGKQILRVSRAVVLGFGCFMGV LAVVLNVAGVSLGWMYLAMGVIVGSAVIPIALLLLWSKANAVGAMGGAVSGCALGVAV WLTVAKVQYGRVNLDTTGRNAPMLAGNLVSILVGGAVHAACSLLRPQHYDWGTSREMI TTVESVHAALDDELKEERLVHAKRWIVRWGLVFTAVIVVAWPALSLPARRYSLGYFTL WAAVAIAWGTVGSVVIILLPVAESWTTITKVCAGMFTNDAVYDRLDDVNLRLRAIMGA MPEAEKRYRQLHETEMHPAGTHPANDDDDDNNNNQMMHS</aaseq>

Gene Sequence

<dnaseqindica>103..285#401..1171#1249..2460#atctctgatctgctagctagtacagtacatatccatctatccgtctgttagagtaaaaattccccatttaattaggatcgatcgattggattgaagctggcgatggcgagcggcgtgtgccctcctgcggagctggggttcggggcggagtactactcggtggtgaacggggtgtgcagccgcgccggcagctacttcggcggaaggccggtgctcacgcaggccgtcgggtacgccgtcgtgctcggcttcggcgccttcttcgcgctcttcacctccttcctggttagcctccgatccttcggcctctcctctcttgagatcgatcgatcgatcgatcgcagagatatgattaattaatttgtggctactacctacgtacgtatgcatatatatataggtgtggcttgagaagcgttacgtcgggtcgcagcacacgtcggagtggttcaacacggcggggcgcagcgtgaagacgggtctgatcgccagcgtgatcgtgtcgcagtggacctgggccgccaccatcctgcagagctcgaacgtggcatggcagtacggggtgagcgggccattctggtacgccagcggcgccaccatccaggtgctcctcttcggcgtgatggccatcgagatcaagcgcaaggcccccaacgcccacaccgtctgcgagatcgtccgcgcccgatggggcacccccgcccacctcgtcttcctcaccttctgcctcctcaccaacgtcatcgtcaccgccatgctcctccttggcggctccgccgtcgtcaacgccctcaccggagtcaacgtctacgccgccagcttcctcatcccgctcggcgtcgtcgtctacacactcgccggcggcctcaaggccaccttcctcgccagctacatccactccgtcgtcgtgcacgcggtgctcgtcgtcttcgtcttcctcgtctacacctccagctccaaactcgggagcccgcgtgtggtgtatgatcgcctcatggccgtcgccagcgccgcgcgcgactgctccgccgacctctcgcgcaacggccaggcgtgcggccccgtcgccggcaacttcaagggctcctacctcaccatgctcagctcgggggggctcgtcttcggcatcatcaacatcgtcggcaactttggaacggtgttcgtagacaacgtacgtacccaaacgtacgtagtactaataattatcttggatcgtcaattaattacaagtaatttaatttgctgcagggctactggatgagcgccatcgccgcccggccatcctccacccacaagggctacctgctgggcggcctcgtgtggttcgccgttcccttctcgctggccacctcgctcggcctcggcgcgctcgccctggacctcccgctcaccgccgccgaggcagccaagggcctggtgcccccggccaccgcaacagcgctcatgggcaagtccggctccgtcctgctactcaccatgctcttcatggccgtcacatccgccggctccgccgagctggtggccgtctcctccctctgcacctacgacatctaccggacgtacctcaacccgggcgcctccggcaagcagatactccgcgtgtcgagggccgtcgtgctcggcttcggctgcttcatgggggtcctcgccgtggtgctcaacgtggcgggggtgtccctggggtggatgtacctggccatgggagtcattgtgggatccgcagtcatccccatcgccctgctgctgctgtggagcaaggccaacgcggtgggcgccatgggcggcgcggtgtccggctgcgcgctgggcgtggccgtgtggctcacggtggccaaggtgcagtacgggcgcgtgaacctggacaccacaggtcggaacgcgccgatgctggcgggcaacctggtgtccatcctggtgggcggggcggtgcacgcggcgtgcagcctgctgcgcccgcagcactacgactgggggaccagccgggagatgatcaccacggtggagagcgtgcatgccgcgctggacgacgagctcaaggaggagcgcctggtgcacgccaagcgttggatcgtcaggtggggcctcgtcttcaccgccgtcatcgtcgtggcgtggcctgcgctgtctctgccggcgaggaggtacagccttggctacttcacgctgtgggccgcggtggcgatcgcgtgggggactgtgggctcggtcgtcatcatccttctgccggtggccgagagctggaccaccatcaccaaggtctgcgccggcatgttcaccaacgacgctgtgtacgaccgcctcgacgacgtcaacctccgcctccgcgccatcatgggcgccatgcccgaggctgagaagcgctaccgccagctacacgagacggagatgcaccctgccggaacccatccggccaacgacgacgacgacgacaataataataatcagatgatgcactcctgattccatccaatcatccatccatccatccatagactaattaagatttctacgtactacatactactcgtacgtacactttttatatacacacatatatgtatggagagcccatataattaaaaaagagtgtgcatcagcagcgtgtgcatgatagtgaacacgttttgtgtatactacaaaataaccgatgtttctcgttagctgatatgttggttgataataaacaggcagcctacgtcatcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0580400, RefSeq:Os10g0580400