BGIOSGA032217

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Revision as of 04:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032217| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032217, complete gene.| tag = OSJNAB0...")
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Gene Name

BGIOSGA032217

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032217, complete gene.

LocusTag

OSJNAB0022I16.6

Ensembl Transcript ID

BGIOSGA032217-TA

Ensembl Protein ID

BGIOSGA032217-PA

Length

2685

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:4947302..4949986

Sequence Coding Region

4947302..4949986

Genome Context

<gbrowseImage1> name=IndicaChromosome10:4947302..4949986 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:4947302..4949986 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAGCATCAGTAGTTTCCTCAGTTTTGCAGAGGCTTGGTGACCTTGTCATCCAAGAAGCTACCTTTTTAAGTGATGTTCCTCGACAAGTATCATCCATGAAAGCAGAACTGAGCCAGATGCAATGCTTCTTAAATGTTGTGGATGCCAAATGTTTGGAAGGAAACAGCATGATGAAAAATCTGGCCAGTAATATTCAAGACGTGGCATACCGGGTGGAAGAGGTTATTGACAATGCTCATTTCATTTTTAGGAGGAGAAAGACTTCTGTATCAAAATATACTCACATCTTTGGTGATTCCATTGACCTCCGTGAGGTTGGCAAAAACATACAAGTTATAAGAAAGGAAATTAGTGAGATTTTTGAGCGGTACAACAGATACAACGCAGTTAATTCTAGCACTTCAACGGAAGCACAGCCCATTTTTAGGGAGGATGAGGATTTCTATGCACAAAGGCTTGTGCCGCCGGGTTTGGATCAAGGAATGGATATAGTTGGATTCGATCATGAAATTGCACAAATTAAGAGTTACTTGCTTGACCAAAATAACATGAATCTAACTGTTATATCGATTGTTGGTCAGGCAGGGGCTGGGAAGTCCACACTTGCAAAACTAGCTTATAGTTCAGTCATAACTGAAGGTTATTTTCACAAATATGGTTGGGTATCCATTTCTCCAAAATATTCTGCCCTTGAAGTATTAAGAGATCTCGTGCGACAGATAAGGGGCACTGGGAAGATAAGCGAGCGAAAGAGCATGCATTTAAATTTCTATGGTGAGACAGAGGTTTCAAAACTTATTTTTGATTTTCTGAAGGAAGAGCGCTACCTTATTGTTTTGGATGACATCTGGACAACAGATACCTGGGACAAGATCAAATCAGTATTTCCTGACAAAGGAAATGGAAGTAGAATAATTCTGACTACCCGTGATATGGAAGTTGGACAACATCCTAAAACTAAAGTGCAAATTCATACCCCTGACCTATTAGACGAAGACAAGAGCTGGGAACTTTTCCAGAAGAAGGCATTTCCACATGATGTGCAATTCACAGAACTTGAGGTGGTGGGGAAAAAACTCTCCAAGAAATGCAATGGCTTGCCACTTGCTCTAGTGGTTTTAGGTTGCTTCCTTTCACGAAACCACAATATTCATACATGGGAGAAAATGGTTGCTAGTGTAGACTGGGAAATCATGAAAAAGGAGGGCGATGTTGGACGTATATTAGCTCTAAGTTATCACAATATGTCAAATAACCTTAAAGCTTGCTTCCTTTATACTGCATCCTTTCCCGAGGACTACCCTATCACAGTTCATGTTCTTAAAAAGATGTGGATTGCTGAGGGATTTGTCCCAAATATAAGAGGATATACACAAGAAGAAGTTGCCTACAGATATGTAGAAGAGCTGGCACAGAGATGTATGATCCAAATTGAAGAAAGAAGTAAAAACATTGGGTGGATAAAGAAAATAAAAGTTCATGATGTGTTGCGTGAGTGGGGAATTGGACAAGCCAGGAAGGAAGGTTTCTTGAAAGTTTGCTCAAGCGGCACAGATGTGGAGACTTATTATGCAGATGAACAGAGGTGTTACCGTGTAGCATTTCATGGTTACTTTGATAATGAAGTGGGAAAATCAGTTCTGAATCTCCGTTCTGTGCTGGCCTTCAACCCTGATGGCAAACGTCTGTTTTCTTTCAATGGGTTGCATTTGTTGAGGGTGCTTCATTTTTGCAGTTCCTTAAAGACATGTACCTTGCCTGAAGAAATAAACAAATTGGTACATCTGAGATACCTGGGTTTGGAAGGTAGTACTGTTTTCATGTTCCCTTCTTATATGAAAGGTCTTAGAAACTTGCAAATTCTTGAAGCAAGTACAGCTACTGTCAAGGCACTTCCAAGTTCCCTCTGGAGCATCGCAGCACTAAAGCATGTTCATGTCTACCAAGTACTGCATTGGAAAGCCCAGGAGATTAGAACGAAACGAAGCTTGCAGACTCTTTATGTATTTTCCATAATGCAGTGTGATGCTCTGACGTGGAAAAGAACAATCAGGTCTCTGCAAAAAATGAGCCAACATGTTTCCTGGTGCTTAGGGATAGCCTCTACTAAACGCGTGAAGGAAAAAGAGACCCAAGAACATGAAGAATACAATTTAGATATAAGGGTAGATGCCTTAGAATCCAAAGTTGATGGTTTAGAATTGTCTGGATGTTTTAAAGAGCGTCACGTTCTGAATGATGTGCTTCCACATCATAATCTATTCCCAAACTTTCTATTGCAGCTCAAGATATCTTGTCCCAATATACTAAATGATGATCCAATGCCAATTCTGGAGAGACTTCCACGTCTTGAAGTGCTTGAAATTGTTAACTCATCATACACAGGAAAGAGAATAACATGTTCTTCCGAGGGATTCCTTGCATTACGCAGTTTGGTACTTATGGATATTGGTTTGGAGGAGTGGAATTTGCAGCAGGGATCCATGGCGTTTCTCGCTGTTTTGACTCTCAAGTGTACCATGCTGAGGAGCATCTCAAATGTACTTCACCAGCTGGATGATTTGGTAGAGCTTCGCTTGATTTGCATGCCTCAGCTCTCTGTTGATGATCATGAGCCAGCTAGGGGGAGGGGATGCCGTGTCATGATTTCAGTTGACGAGGAACAAACTTCTGATACTTGA</cdnaseq>

Protein Sequence

<aaseq>MTASVVSSVLQRLGDLVIQEATFLSDVPRQVSSMKAELSQMQCFLNVVDAKCLEGNSMMKNLASNIQDVAYRVEEVIDNAHFIFRRRKTSVSKYTHIFGDSIDLREVGKNIQVIRKEISEIFERYNRYNAVNSSTSTEAQPIFREDEDFYAQRLVPPGLDQGMDIVGFDHEIAQIKSYLLDQNNMNLTVISIVGQAGAGKSTLAKLAYSSVITEGYFHKYGWVSISPKYSALEVLRDLVRQIRGTGKISERKSMHLNFYGETEVSKLIFDFLKEERYLIVLDDIWTTDTWDKIKSVFPDKGNGSRIILTTRDMEVGQHPKTKVQIHTPDLLDEDKSWELFQKKAFPHDVQFTELEVVGKKLSKKCNGLPLALVVLGCFLSRNHNIHTWEKMVASVDWEIMKKEGDVGRILALSYHNMSNNLKACFLYTASFPEDYPITVHVLKKMWIAEGFVPNIRGYTQEEVAYRYVEELAQRCMIQIEERSKNIGWIKKIKVHDVLREWGIGQARKEGFLKVCSSGTDVETYYADEQRCYRVAFHGYFDNEVGKSVLNLRSVLAFNPDGKRLFSFNGLHLLRVLHFCSSLKTCTLPEEINKLVHLRYLGLEGSTVFMFPSYMKGLRNLQILEASTATVKALPSSLWSIAALKHVHVYQVLHWKAQEIRTKRSLQTLYVFSIMQCDALTWKRTIRSLQKMSQHVSWCLGIASTKRVKEKETQEHEEYNLDIRVDALESKVDGLELSGCFKERHVLNDVLPHHNLFPNFLLQLKISCPNILNDDPMPILERLPRLEVLEIVNSSYTGKRITCSSEGFLALRSLVLMDIGLEEWNLQQGSMAFLAVLTLKCTMLRSISNVLHQLDDLVELRLICMPQLSVDDHEPARGRGCRVMISVDEEQTSDT</aaseq>

Gene Sequence

<dnaseqindica>1..2685#ATGACAGCATCAGTAGTTTCCTCAGTTTTGCAGAGGCTTGGTGACCTTGTCATCCAAGAAGCTACCTTTTTAAGTGATGTTCCTCGACAAGTATCATCCATGAAAGCAGAACTGAGCCAGATGCAATGCTTCTTAAATGTTGTGGATGCCAAATGTTTGGAAGGAAACAGCATGATGAAAAATCTGGCCAGTAATATTCAAGACGTGGCATACCGGGTGGAAGAGGTTATTGACAATGCTCATTTCATTTTTAGGAGGAGAAAGACTTCTGTATCAAAATATACTCACATCTTTGGTGATTCCATTGACCTCCGTGAGGTTGGCAAAAACATACAAGTTATAAGAAAGGAAATTAGTGAGATTTTTGAGCGGTACAACAGATACAACGCAGTTAATTCTAGCACTTCAACGGAAGCACAGCCCATTTTTAGGGAGGATGAGGATTTCTATGCACAAAGGCTTGTGCCGCCGGGTTTGGATCAAGGAATGGATATAGTTGGATTCGATCATGAAATTGCACAAATTAAGAGTTACTTGCTTGACCAAAATAACATGAATCTAACTGTTATATCGATTGTTGGTCAGGCAGGGGCTGGGAAGTCCACACTTGCAAAACTAGCTTATAGTTCAGTCATAACTGAAGGTTATTTTCACAAATATGGTTGGGTATCCATTTCTCCAAAATATTCTGCCCTTGAAGTATTAAGAGATCTCGTGCGACAGATAAGGGGCACTGGGAAGATAAGCGAGCGAAAGAGCATGCATTTAAATTTCTATGGTGAGACAGAGGTTTCAAAACTTATTTTTGATTTTCTGAAGGAAGAGCGCTACCTTATTGTTTTGGATGACATCTGGACAACAGATACCTGGGACAAGATCAAATCAGTATTTCCTGACAAAGGAAATGGAAGTAGAATAATTCTGACTACCCGTGATATGGAAGTTGGACAACATCCTAAAACTAAAGTGCAAATTCATACCCCTGACCTATTAGACGAAGACAAGAGCTGGGAACTTTTCCAGAAGAAGGCATTTCCACATGATGTGCAATTCACAGAACTTGAGGTGGTGGGGAAAAAACTCTCCAAGAAATGCAATGGCTTGCCACTTGCTCTAGTGGTTTTAGGTTGCTTCCTTTCACGAAACCACAATATTCATACATGGGAGAAAATGGTTGCTAGTGTAGACTGGGAAATCATGAAAAAGGAGGGCGATGTTGGACGTATATTAGCTCTAAGTTATCACAATATGTCAAATAACCTTAAAGCTTGCTTCCTTTATACTGCATCCTTTCCCGAGGACTACCCTATCACAGTTCATGTTCTTAAAAAGATGTGGATTGCTGAGGGATTTGTCCCAAATATAAGAGGATATACACAAGAAGAAGTTGCCTACAGATATGTAGAAGAGCTGGCACAGAGATGTATGATCCAAATTGAAGAAAGAAGTAAAAACATTGGGTGGATAAAGAAAATAAAAGTTCATGATGTGTTGCGTGAGTGGGGAATTGGACAAGCCAGGAAGGAAGGTTTCTTGAAAGTTTGCTCAAGCGGCACAGATGTGGAGACTTATTATGCAGATGAACAGAGGTGTTACCGTGTAGCATTTCATGGTTACTTTGATAATGAAGTGGGAAAATCAGTTCTGAATCTCCGTTCTGTGCTGGCCTTCAACCCTGATGGCAAACGTCTGTTTTCTTTCAATGGGTTGCATTTGTTGAGGGTGCTTCATTTTTGCAGTTCCTTAAAGACATGTACCTTGCCTGAAGAAATAAACAAATTGGTACATCTGAGATACCTGGGTTTGGAAGGTAGTACTGTTTTCATGTTCCCTTCTTATATGAAAGGTCTTAGAAACTTGCAAATTCTTGAAGCAAGTACAGCTACTGTCAAGGCACTTCCAAGTTCCCTCTGGAGCATCGCAGCACTAAAGCATGTTCATGTCTACCAAGTACTGCATTGGAAAGCCCAGGAGATTAGAACGAAACGAAGCTTGCAGACTCTTTATGTATTTTCCATAATGCAGTGTGATGCTCTGACGTGGAAAAGAACAATCAGGTCTCTGCAAAAAATGAGCCAACATGTTTCCTGGTGCTTAGGGATAGCCTCTACTAAACGCGTGAAGGAAAAAGAGACCCAAGAACATGAAGAATACAATTTAGATATAAGGGTAGATGCCTTAGAATCCAAAGTTGATGGTTTAGAATTGTCTGGATGTTTTAAAGAGCGTCACGTTCTGAATGATGTGCTTCCACATCATAATCTATTCCCAAACTTTCTATTGCAGCTCAAGATATCTTGTCCCAATATACTAAATGATGATCCAATGCCAATTCTGGAGAGACTTCCACGTCTTGAAGTGCTTGAAATTGTTAACTCATCATACACAGGAAAGAGAATAACATGTTCTTCCGAGGGATTCCTTGCATTACGCAGTTTGGTACTTATGGATATTGGTTTGGAGGAGTGGAATTTGCAGCAGGGATCCATGGCGTTTCTCGCTGTTTTGACTCTCAAGTGTACCATGCTGAGGAGCATCTCAAATGTACTTCACCAGCTGGATGATTTGGTAGAGCTTCGCTTGATTTGCATGCCTCAGCTCTCTGTTGATGATCATGAGCCAGCTAGGGGGAGGGGATGCCGTGTCATGATTTCAGTTGACGAGGAACAAACTTCTGATACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032217