Os10g0580900

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Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0580900| Description = Conserved hypothetical protein| Version = NM_001072049.1 GI:115483693 GeneID:4349524| Length = 2521 bp| Definition ...")
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Gene Name

Os10g0580900

Description

Conserved hypothetical protein

Version

NM_001072049.1 GI:115483693 GeneID:4349524

Length

2521 bp

Definition

Oryza sativa Japonica Group Os10g0580900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23647745..23650265

Sequence Coding Region

23647896..23648528,23648859..23649137,23649242..23649388

Expression

GEO Profiles:Os10g0580900

Genome Context

<gbrowseImage1> name=NC_008403:23647745..23650265 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23647745..23650265 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccctttttccgcagagcttccagtgaccccttgtgcttggaagacaactccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctacaagtttttcattctcgtccgttaattttcctgttcctgcaagaggagacaagggtccaatttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggttgttccactttcacatggatcatttgagcgatttgagaagccaatgccaaagcccaatcctgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttttttcagctttggtgatttctcaaataagcgcaataagaagaatagtaaccaaaagaagcccaacaaccttccccagaacggaggtcagcctaataaccatgaagcactgagcaatgagtggctggaaatgggtcaatgccccctggcaaagtcgtacagggcattaagtggtgtcgtgcccctcgtcgcaaagatgatgacacccccggctggtatgaaactgagatgcccacctgcagtagttgccgcccgtgcagcactatcacgcacagcctttgccaaggggcttcgtcctcagcccctaccgacgaaaatactggtgatggcgttgcttggtatggcagcaaacgttccccttggcatctggagggagcacacggagaaattctcagtgcagtggtttgccgcagtccatgcggcggtacctttcataggcatgctcaggaagtctgtgctgatgccaaagacagccatggcgcttaccatagctgcctcaatattgggtcagacaattggttcgagagctgagcgtatcagattgaagagggcagcaaaggttgctgctggtagccagggtgatgctagcaccagaatgagcctgaaaaccgggagatacactgatgatgtccagttctgggatccgcttgccctcagagttgagagtaccataggaacaggaactccggttcttgttccaactttccattga</cdnaseq>

Protein Sequence

<aaseq>MDPFFRRASSDPLCLEDNSVQHGIERCPFLRNINEPTSFSFSSV NFPVPARGDKGPIFEDGPNFDMAFRVFHGQDGVVPLSHGSFERFEKPMPKPNPEFNPL AAKAATISLSAFGGFFSFGDFSNKRNKKNSNQKKPNNLPQNGGQPNNHEALSNEWLEM GQCPLAKSYRALSGVVPLVAKMMTPPAGMKLRCPPAVVAARAALSRTAFAKGLRPQPL PTKILVMALLGMAANVPLGIWREHTEKFSVQWFAAVHAAVPFIGMLRKSVLMPKTAMA LTIAASILGQTIGSRAERIRLKRAAKVAAGSQGDASTRMSLKTGRYTDDVQFWDPLAL RVESTIGTGTPVLVPTFH</aaseq>

Gene Sequence

<dnaseqindica>1738..2370#1129..1407#878..1024#tcttctcttgtttcttcccatcccatcctcttctcctccgcattttgctcttcattcatttgtgctgtgctctccacgcgccctcgcctctctttcctccgatcctccgcttcgttcgaatcccacaggtgaggtgacctcttctctccagtctcctctccttagtaggattaggatcattacgaatttaggatcgagaatataggattatgaaccagtagtattaggattatgttttcttcgattctttttctccttcaaatcaattcccaattcgatttagggttgacggatacgcgagcagggatagccctcccgcccgcagaaagattgggctttcttggtttccctgtcgtaatcccttctctccagccaacgcggtgaaaattttgtttcggtgggggtggggtgggtggttgccgggtaggtgctggtgcatctgctttcagtttcaccaccaccatggattggccgctaaacatatactgatatacacctgtttcctgtcccctacccctaggctagactactagggagaattcaaaaaaaaaaaagaacgctggacaactagggagaatacaatgcaaccagattcaatcatactaaggcttgtattcccaaacaccacttaaatcttacgcttctagccatccttttaattctagtgttagcaataatctagtctatgactctacatgctcttgcggaacaaaataatattatagtcgcccaagacacttttttgtcaagttttttttttataaatgatttggctcatcagttaagcatggacctgccacggcagcatcatttctttctgttttaacatgctatactaacacttctctctgctcacaggtcagtttgtggtgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagacaactccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctacaagtttttcattctcgtccgttaattttcctgttcctgtaagccctttaccttccatcctcataatcttatcgcatgtttctgaaaaattggatgtattgtggatgccattgctcaactatatcatttgctgcttgtaaaggcaagaggagacaagggtccaatttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggttgttccactttcacatggatcatttgagcgatttgagaagccaatgccaaagcccaatcctgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttttttcagctttggtgatttctcaaataagcgcaataagaagaatagtaaccaaaagaagcccaacaaccttccccaggtaagtttttggttctctttgctcaggctcttctttttttcagattaccttgcttgtctatatcgaagtgtgatgtgtcagaatagtttgtttaaagaaatcatttgtcagaatgttgtggcatcctactggatggttctttagatgagaccaattttaatacgaaaaggaaagggaaatcattttggtaacagtaaataaatgctggacatgatttttatgaacttcccctatccctagatagggggaacactaaaatgaagatggaatgaatggttttaccatattggtagtaagaggtgcacttaatctgattctttggtatttcagaacggaggtcagcctaataaccatgaagcactgagcaatgagtggctggaaatgggtcaatgccccctggcaaagtcgtacagggcattaagtggtgtcgtgcccctcgtcgcaaagatgatgacacccccggctggtatgaaactgagatgcccacctgcagtagttgccgcccgtgcagcactatcacgcacagcctttgccaaggggcttcgtcctcagcccctaccgacgaaaatactggtgatggcgttgcttggtatggcagcaaacgttccccttggcatctggagggagcacacggagaaattctcagtgcagtggtttgccgcagtccatgcggcggtacctttcataggcatgctcaggaagtctgtgctgatgccaaagacagccatggcgcttaccatagctgcctcaatattgggtcagacaattggttcgagagctgagcgtatcagattgaagagggcagcaaaggttgctgctggtagccagggtgatgctagcaccagaatgagcctgaaaaccgggagatacactgatgatgtccagttctgggatccgcttgccctcagagttgagagtaccataggaacaggaactccggttcttgttccaactttccattgatgatgtgccttgggtttgtttcttcggtcgattattgttgtattcattgtgttgtgccttagtctttatactaaatattacgttggatgcttctcccatgaatctggggtccaaatttcagtgtacaataaattgcacgtgtacatttccg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0580900, RefSeq:Os10g0580900