BGIOSGA032230

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Revision as of 04:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032230| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032230, complete gene.| tag = OS10G01...")
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Gene Name

BGIOSGA032230

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032230, complete gene.

LocusTag

OS10G0177200

Ensembl Transcript ID

BGIOSGA032230-TA

Ensembl Protein ID

BGIOSGA032230-PA

Length

3866

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:4587518..4591383

Sequence Coding Region

4591090..4591383,4588479..4588775),complement(4588096..4588314,4587862..4587987),complement(4587518..4587754

Genome Context

<gbrowseImage1> name=IndicaChromosome10:4587518..4591383 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:4587518..4591383 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGGCAAGATGGAGAACGGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGTGAGGAGGAGGAGGAACGGCGAGGTGGTGGTGGACGGGTCGGAGATCCTGCAGCTGGTGGAGAACAAGGAGGCGTTTGGTAAGTTCGTGGAGCAGAAGTTCAGGCTGCTCGACGGCGACGGCGACGGGAGGCTGTCGGTGAGGGAGCTCCAGCCGGCCGTCGCTGACATCGGCGCCGCCATCGGGTTGCCGGCGAGGGGGTCGTCGGCGCAGGCCGACCACATCTACTCTGAGGTTCTTAACGAGTTCACAAAAGGGAAGAAAGAATCGGTGAGCAAGTCAGAGTTCCAGCGTGTCCTCTCTGACATACTTCTTGGCATGGCGGCTGGACTAAAGAGGGACCCCATTGTGATCTTGAGGATTAACGGTGAAGATTTGAATGAATTTGTTGAGAGCCCAAGGTACGAACCGGAGATGGCTGCCATATTTTCGCAAGTTGAATCAGGAAATTCAACCTTGCAGCAGTGCATGCTAGCTGCTATTCGACAACTGACGGTCGACCACGGCATGCCACCGGCTTCAGATTCATGGGTTATGGAGAATATCATAGAACCTGCATTGCAAGAACTCCGTGGTGATAACCTGGAGCAACCTGTCACTCAAGAGGTCTTCTTCCAGGAATTCAGAAAGTTCTTGGCAATCCTCACGCAGCGACTCCAAGGGCACCCTGTGATTGTAGCACATACCGAGAACACCTTTGATGGGAATGGTATCAAGAAGCTGCTGTCAAACAAGCTCGAATTAGATAAGCTGTTGGATTGTGTTTGGAGAGGCGTACCGAAAGAAAAAGATAGAACAGCGAAGCAGTACATTCGGGTTGCGTTCGATAGGATGGCTGACTCCATAAATCTACCACCATATGGAGCTGTTGAACAGGTAGATGCTGTGGTCGATGAGGCGTTCAAGATGGCGAAAGCCGAGGACGGGAAGGCGGTGGATGAAACGGAGTTCAAGAAATTGCTCACTGAGATCCTTGGGGCAGTGATGCTGCAGCTAGATGGCAATCCAATATCGGTTTCGACCAACAGTGTACTCCATGAGCCAATGTCCACTTCTTCCACCCTGCTTTCGCCATCGCCGCCGTCGCCAATGGTGTCATCACCGAGTGAATAA</cdnaseq>

Protein Sequence

<aaseq>MASGKMENGQQQQQQQQQQEVRRRRNGEVVVDGSEILQLVENKEAFGKFVEQKFRLLDGDGDGRLSVRELQPAVADIGAAIGLPARGSSAQADHIYSEVLNEFTKGKKESVSKSEFQRVLSDILLGMAAGLKRDPIVILRINGEDLNEFVESPRYEPEMAAIFSQVESGNSTLQQCMLAAIRQLTVDHGMPPASDSWVMENIIEPALQELRGDNLEQPVTQEVFFQEFRKFLAILTQRLQGHPVIVAHTENTFDGNGIKKLLSNKLELDKLLDCVWRGVPKEKDRTAKQYIRVAFDRMADSINLPPYGAVEQVDAVVDEAFKMAKAEDGKAVDETEFKKLLTEILGAVMLQLDGNPISVSTNSVLHEPMSTSSTLLSPSPPSPMVSSPSE</aaseq>

Gene Sequence

<dnaseqindica>1..294#2609..2905#3070..3288#3397..3522#3630..3866#ATGGCGTCGGGCAAGATGGAGAACGGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGTGAGGAGGAGGAGGAACGGCGAGGTGGTGGTGGACGGGTCGGAGATCCTGCAGCTGGTGGAGAACAAGGAGGCGTTTGGTAAGTTCGTGGAGCAGAAGTTCAGGCTGCTCGACGGCGACGGCGACGGGAGGCTGTCGGTGAGGGAGCTCCAGCCGGCCGTCGCTGACATCGGCGCCGCCATCGGGTTGCCGGCGAGGGGGTCGTCGGCGCAGGCCGACCACATCTACTCTGAGGTAGTAATTCCTTGTATATCCTGATGTTCATTTATTTCTAGAGGGAAATACATCCTGATGTGTGTCAGTGTGTCATGAAGTTGACGCTACCTATAGCTGTTAACTGTCTTAATGTCTTTACCGATTTGGTCGATTTTTGTCATGTTCATGTTCATGTGTCACGAACGTATTTTAGAATTAAGATAGGTTTATATATATATATTTCATATTTCAAAATCTTTTAGAAGATACAACAGATTTCTTGTAATTAATGGTACATATACTAACTCCGTTTTGCTGTTGATTTTGGAAACACATACTACCTCCGTTTTGCGGTTGATTTTAGAAACTCTTGTCTAAGTATCAATTTATCTTTTTATTTTTTCACTAAAGATAAAATAAGCTTGACTCATGCATTTTTTTTCATATTTTCGACTAATCTATTTGTTTTGTCATTAAAGATAATATAGGCATGACTCACGATCGTAAAATTTGTCAACTTTTTTAGCATTTTTATTTATTTATTAAATAAATAAATCTTGTATGAGAGTACAAACAAGAGGGAAGTGTAGGCGAAATAAACTAATAAGGAGTGAGGATAAAGAGAGCTATTCATCTACAAATTCTAGATGTTCAGTAGAACATTGTTAATGGAAATACAATGGTGAGAAAAAAAATAGATAGAAAAACTTAAAAATGTTTATTTTCATATTTGTGACTAATGGTCGACAAAGGTTATGTACAAAAGTCAACATTACAATATATTTAAAAAGGGAGCAAACGTTATATATCAAAGTCATTGTTATCATATATCTAAAAATGGAGGGAGTAGTTTAATTATAATTGTTAAAGTTTGATTTTCTCATGACATTCAAAGTCAGCCAGCGTATAATAAAATTGGTTAAAAGGAAGCGATCAAAATGGGGGAGAGTGTTTCTCTTTTCTTAAACAAGGAGATAGCATATTTTACATACGGGCTAATTTAATACTTCATCCATACATATTTATTGGTCATTATTTTGATTCTACTAACCGTTGATGCTTTTCACTAAGTATTACTCCTTCAGTTCCAAAATATAAGGGATTTTGATTTGATAATACGCATCCTAATAATACGAATCTAGATAGTCCAGATTCGTAGTATTAGGATATGTCTATCCAACCAAAATTGTTTGAATTTCGTGACGGAGGGAGTACATTTTGGGCATTTCTATTTTTTTAAAATAATGGAAAACCAAAAATACTGGTTGGATACTTAGAACCGACACCTATGTCAATTGGCATAGGTGACGCCAAATTGGTGTCGGTTGAGAAACCGGCACTTATAATTAAGTGGTTTCCAACCAGCATCTATATGGTGCTCTGTAATAGTTATTATAGCGTTATGCCTCTTCAAGGACACGAATAATGCATTAAAAAAATCAGACACTTCTTTTATGTTTATTTTGTTCAGTTTAGTAATATGATTTGGCTCATCTGGCCATGACAGAAACGAATATGAAGTTTTATGGTGGCTCTAGGAAGCAAATTAAGCAATTATTCAGAAAAAAAATTATAATCTGACAGTACAAAAAAATGATGCACTAGATTTCATGGAAAATGGAAAAGATGTGTTTTCACTTTACGGGTTTCATTACAGTATTTAGTACATTACAGATGAAAAGGTTTTATGGACTCCCATAAAAATGGGTTTTTTTGGACTTGTTCTTTTTGAAATTGTCTGAAGAATTTCTTTTGGAAATGAATACACTCAGGGTGAATATAGAAGAAAGTATTTTGAGATTTTCCTATAATTCCACTAGAGTATGAGTATTGCTTTGACCTGCCAAATGGAAGAAACTGGAACGTGCCTAAATTAACCAGGAAAACGTCACATTCTAATGATCTAGCCCCAAGACTTATCAGTTGACAGAACAAGATAATCTTACTGAAAGTGACTGCTCTTGTGTGGCCAAAGTCATCATCCTTTTCAAATTCCCATCCAATTTGTCTAGCATGTTCTAGGTGTCTACCTCCTGAACATTCTGATATCGCTGTAACTTATCATTCCGGTTTCTTAGACACATCTTTTCGAAAGATGATGCCTATAACGATTTCTTAGATAAATATTAGTTCCTTTTGACACATGTTCTCTTGCTTACTCTTGACAATGACAAAAATAATGGTTTACTGGATTTTCTTCCAGAGAGGTGTCTGTTCATGAGCTCTACTTCCATTATACATTGTCAGTAACTTGCAGTAAAATTTAATCACATTTCCTGGATAATCTTGAACCAAAACATCCGATAATTACTGTTGTCTAATTCATCTCATGGCTCATGGAATTAACCTGCAGGTTCTTAACGAGTTCACAAAAGGGAAGAAAGAATCGGTGAGCAAGTCAGAGTTCCAGCGTGTCCTCTCTGACATACTTCTTGGCATGGCGGCTGGACTAAAGAGGGACCCCATTGTGATCTTGAGGATTAACGGTGAAGATTTGAATGAATTTGTTGAGAGCCCAAGGTACGAACCGGAGATGGCTGCCATATTTTCGCAAGTTGAATCAGGAAATTCAACCTTGCAGCAGTGCATGCTAGCTGCTATTCGACAACTGACGGTCGACCACGGCATGCCACCGGCTTCAGATTCATGGGTAATTGCCAATGAATGTGTTACGTAATTCAGAGCAGAAAACGAAATCATTTCATACAGGGTAACAAATATAACAGAGTAACAGTTATTCTGTTACCGAGACTGACAAAACAGAGTGGAGATGAGGTTAAGAGAGAAATTAGTAAGGTTGGCTGTTTTTTACAGGTTATGGAGAATATCATAGAACCTGCATTGCAAGAACTCCGTGGTGATAACCTGGAGCAACCTGTCACTCAAGAGGTCTTCTTCCAGGAATTCAGAAAGTTCTTGGCAATCCTCACGCAGCGACTCCAAGGGCACCCTGTGATTGTAGCACATACCGAGAACACCTTTGATGGGAATGGTATCAAGAAGCTGCTGTCAAACAAGCTCGAATTAGATAAGGTACGGTATTGTTTCTATCCTCGATGTCATCATCTTCCCATAAAAATATACTCCTATATATTAGTGTTACTTCATACCGATCTACTTATACTATCTTTTGTGATCAAGCTGTTGGATTGTGTTTGGAGAGGCGTACCGAAAGAAAAAGATAGAACAGCGAAGCAGTACATTCGGGTTGCGTTCGATAGGATGGCTGACTCCATAAATCTACCACCATATGGAGCTGTTGAACAGGTAGAATTTCATTTGCTACCAATCATTTCATCAGTAATTTTCAGGAAAACCAGCCAAAACACATTGTATGTTCAGATCTAAGGCTTATGGTAAGTTGGTAACTGCAGGTAGATGCTGTGGTCGATGAGGCGTTCAAGATGGCGAAAGCCGAGGACGGGAAGGCGGTGGATGAAACGGAGTTCAAGAAATTGCTCACTGAGATCCTTGGGGCAGTGATGCTGCAGCTAGATGGCAATCCAATATCGGTTTCGACCAACAGTGTACTCCATGAGCCAATGTCCACTTCTTCCACCCTGCTTTCGCCATCGCCGCCGTCGCCAATGGTGTCATCACCGAGTGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032230