BGIOSGA032258

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Revision as of 04:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032258| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032258, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA032258

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032258, complete gene.

LocusTag

OSJNBA0050E08.17

Ensembl Transcript ID

BGIOSGA032258-TA

Ensembl Protein ID

BGIOSGA032258-PA

Length

2415

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:3635627..3638041

Sequence Coding Region

3635627..3638041

Genome Context

<gbrowseImage1> name=IndicaChromosome10:3635627..3638041 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:3635627..3638041 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGAAGTACTTCTGTCAAGTTTTGCCGTGTCAATTATTGGAAAAATAATTTTGTTTGTTAGTGAACACGGTTTGATGGGGATTAAATCAGACAGAAGTGTGCATCAAGAACTGGGGAAGCTACAGAATTCGTTGCAAGCTATTAGTGGAGTTCTTCTAGACGCAGAGAGGAAGCAGAGTACTTCTAGTGCACTCAAGGAATGGCTGCGAAAACTGAAAGATGTCATGTATGACATAGATGACATTTTGGACGATGCGTCAACTGAAACTTTGAAGCGCAGAGTTAGCAAAGATGTGGTTACTCAAACCAATTGTGTACATATTTCTCGATTGAAATTGAGAAGAAAATTGCTCAAAAGGAAGAAGAAATGGAGCAGCAGAATAAGAGAAGTTCATGAAAAGCTTAACGAAATAGCCGCTAGTAAAAAGGACTTTGGACTGACCGATTGGACAGTGGGTGGTCAGTGTTCTGAAGAACCAGAAAGAGAATCATATTCTTTTGTGTATCAACCTGATATAATTGGAAGGGATGATGCTAGAGATGAGATTGTTAGTAAGATACTAAGAGCAGCAGAACATCATGATATTTTTGTGCTTCCTCTGCTTGGGCTTGGAGGCATTGGGAAAACTGAACTAGCAAATATGGTGTATCATGATCAACAAATCAGGGAGAGGTTCAGCAAGATGATGTGGGCCTGTGTCTCTAATAAATTTAATCTGAAAAATATACTACAAGATATAATCGAGTCTGCCAGTGGTGAGAGTTGCAAGCATCTAAACTTGGAACATTTACAAAATAAGCTCAGGGGAATTCTGCAGAATGGAAATTATTTCCTGGTATTGGATGATCTGTGGACTCGTGATGTAAATGAATGGAGAGAGCTGAGGAATTTGTTGTCAAGTGGTGCAAGGGGTAGTGTGATAATTGTTACTACACGCGAAAATGTTGTTGCATCTATGGTTGGTACCTCAGACCCGTACAAGGTGGGTGCACTCCCTTTTCATGAGTGCATGCAAATTTTTACCAGAGTTGCATTCAGACAAGGTGAGGAAAATAAATATCCGTGGTTGTTGAAAATTGGAGAGTCCATTGTGAAGAAGTGTGCTGGAGTACCACTGGCAATAAAATCATTGGGTTCTCTACTATTTACCATGCGTGATGAAACTCAATGGCTACGCGTTAAAGAAGACCACTTGTGCAAAATTGTACAAGGTGACAGAGATATAATGCCAGTGCTAAAGTTAAGTTACAATGCTCTTCCAGCTGCCCTTAAACCATGTCTTTCCTATTTATCCATATTTCCTAAGGACTTCGAATATTACAGAAGATGCATAATCATGTTTTGGATGGCACATGGGCTACTGAACTCGAACAAATTGAGTGAAGAAATAGATGTTGGTAATCAGTACATTATTGAATTGATAGGAAGTTCCCTTTTTCAAGACTCTCTAATTACTTTTGATGGAAGCATGCCACATTGCAAGTTACATGACATTGTACATGATCTTGGTAGATATGTTTTGGACACAGACCTAGCTGTTGTGAACTGTGAAGGGCAACAAGTCTCAGAAACAGTCAGGCATCTAGTATGGGACCTTAAGGATTTCACACACGAGCAAGAATTTCCCAGGCATTTAATCAAAGCAAGAAAAGCTCGAACTTTTATTAGTTCGTGTAATCATGGTTCTTTAAGCAAAAAATTTCTGGAAGTGCTGCTGTCCAAGTTATTGCTTCTACGTGTATTGATTATATCCGGAGTTAGAATTGACGAACTCCCAGATTCAATTGGAAATTTGAAGCACTTGAGGTATCTTGACCTCACCTGGAACAAAACCATAAAATACCTTCCCAATTCCCTATGCAAGCTCATAAACCTTCAGACACTTGATCTTTATCGAAGTGACCAACTAATCGAGTTGCCGAGAGATGTAAACAAGTTAATCAGCCTCAGGTACCTGAGTTTGACATCGAAGCAAAAGCAGTTGCCAGAAGCAGGACTTCGTGGCTGGGCTTCACTAACATCCCTGCAGCTTCACTCATGTAGTGAACTAACATCACTGTCAGAAGGGATTGGCTCGTTGACTGCCCTACAGATGCTGTGGATCAGTGATTGCCCAAAGCTTCCTTCTCTCCCAGCCAGCATGACACACCTCTCCAGTCTGCGAGAGCTGTTCATCGACAATTGCCCGGAGCTGGATTTGATGCATCCAGAGGAGGCCATGGATGGGCTATGGAGTCTTCGATCATTGCAGATCATTGGACTTCCAAAGCTAGAGCGTCTTCCTGACACTCTTTGTTCTGCCTCGGGTTCTCTTCGGTATTTATTGATTGAGCAATGCCCCAATCTAAGGGAGCTTCCAAGCTTCATGCAAGATCTCACTAACCATCAGAGGCAGGGGGGTATTCATTAA</cdnaseq>

Protein Sequence

<aaseq>MAEVLLSSFAVSIIGKIILFVSEHGLMGIKSDRSVHQELGKLQNSLQAISGVLLDAERKQSTSSALKEWLRKLKDVMYDIDDILDDASTETLKRRVSKDVVTQTNCVHISRLKLRRKLLKRKKKWSSRIREVHEKLNEIAASKKDFGLTDWTVGGQCSEEPERESYSFVYQPDIIGRDDARDEIVSKILRAAEHHDIFVLPLLGLGGIGKTELANMVYHDQQIRERFSKMMWACVSNKFNLKNILQDIIESASGESCKHLNLEHLQNKLRGILQNGNYFLVLDDLWTRDVNEWRELRNLLSSGARGSVIIVTTRENVVASMVGTSDPYKVGALPFHECMQIFTRVAFRQGEENKYPWLLKIGESIVKKCAGVPLAIKSLGSLLFTMRDETQWLRVKEDHLCKIVQGDRDIMPVLKLSYNALPAALKPCLSYLSIFPKDFEYYRRCIIMFWMAHGLLNSNKLSEEIDVGNQYIIELIGSSLFQDSLITFDGSMPHCKLHDIVHDLGRYVLDTDLAVVNCEGQQVSETVRHLVWDLKDFTHEQEFPRHLIKARKARTFISSCNHGSLSKKFLEVLLSKLLLLRVLIISGVRIDELPDSIGNLKHLRYLDLTWNKTIKYLPNSLCKLINLQTLDLYRSDQLIELPRDVNKLISLRYLSLTSKQKQLPEAGLRGWASLTSLQLHSCSELTSLSEGIGSLTALQMLWISDCPKLPSLPASMTHLSSLRELFIDNCPELDLMHPEEAMDGLWSLRSLQIIGLPKLERLPDTLCSASGSLRYLLIEQCPNLRELPSFMQDLTNHQRQGGIH</aaseq>

Gene Sequence

<dnaseqindica>1..2415#ATGGCCGAAGTACTTCTGTCAAGTTTTGCCGTGTCAATTATTGGAAAAATAATTTTGTTTGTTAGTGAACACGGTTTGATGGGGATTAAATCAGACAGAAGTGTGCATCAAGAACTGGGGAAGCTACAGAATTCGTTGCAAGCTATTAGTGGAGTTCTTCTAGACGCAGAGAGGAAGCAGAGTACTTCTAGTGCACTCAAGGAATGGCTGCGAAAACTGAAAGATGTCATGTATGACATAGATGACATTTTGGACGATGCGTCAACTGAAACTTTGAAGCGCAGAGTTAGCAAAGATGTGGTTACTCAAACCAATTGTGTACATATTTCTCGATTGAAATTGAGAAGAAAATTGCTCAAAAGGAAGAAGAAATGGAGCAGCAGAATAAGAGAAGTTCATGAAAAGCTTAACGAAATAGCCGCTAGTAAAAAGGACTTTGGACTGACCGATTGGACAGTGGGTGGTCAGTGTTCTGAAGAACCAGAAAGAGAATCATATTCTTTTGTGTATCAACCTGATATAATTGGAAGGGATGATGCTAGAGATGAGATTGTTAGTAAGATACTAAGAGCAGCAGAACATCATGATATTTTTGTGCTTCCTCTGCTTGGGCTTGGAGGCATTGGGAAAACTGAACTAGCAAATATGGTGTATCATGATCAACAAATCAGGGAGAGGTTCAGCAAGATGATGTGGGCCTGTGTCTCTAATAAATTTAATCTGAAAAATATACTACAAGATATAATCGAGTCTGCCAGTGGTGAGAGTTGCAAGCATCTAAACTTGGAACATTTACAAAATAAGCTCAGGGGAATTCTGCAGAATGGAAATTATTTCCTGGTATTGGATGATCTGTGGACTCGTGATGTAAATGAATGGAGAGAGCTGAGGAATTTGTTGTCAAGTGGTGCAAGGGGTAGTGTGATAATTGTTACTACACGCGAAAATGTTGTTGCATCTATGGTTGGTACCTCAGACCCGTACAAGGTGGGTGCACTCCCTTTTCATGAGTGCATGCAAATTTTTACCAGAGTTGCATTCAGACAAGGTGAGGAAAATAAATATCCGTGGTTGTTGAAAATTGGAGAGTCCATTGTGAAGAAGTGTGCTGGAGTACCACTGGCAATAAAATCATTGGGTTCTCTACTATTTACCATGCGTGATGAAACTCAATGGCTACGCGTTAAAGAAGACCACTTGTGCAAAATTGTACAAGGTGACAGAGATATAATGCCAGTGCTAAAGTTAAGTTACAATGCTCTTCCAGCTGCCCTTAAACCATGTCTTTCCTATTTATCCATATTTCCTAAGGACTTCGAATATTACAGAAGATGCATAATCATGTTTTGGATGGCACATGGGCTACTGAACTCGAACAAATTGAGTGAAGAAATAGATGTTGGTAATCAGTACATTATTGAATTGATAGGAAGTTCCCTTTTTCAAGACTCTCTAATTACTTTTGATGGAAGCATGCCACATTGCAAGTTACATGACATTGTACATGATCTTGGTAGATATGTTTTGGACACAGACCTAGCTGTTGTGAACTGTGAAGGGCAACAAGTCTCAGAAACAGTCAGGCATCTAGTATGGGACCTTAAGGATTTCACACACGAGCAAGAATTTCCCAGGCATTTAATCAAAGCAAGAAAAGCTCGAACTTTTATTAGTTCGTGTAATCATGGTTCTTTAAGCAAAAAATTTCTGGAAGTGCTGCTGTCCAAGTTATTGCTTCTACGTGTATTGATTATATCCGGAGTTAGAATTGACGAACTCCCAGATTCAATTGGAAATTTGAAGCACTTGAGGTATCTTGACCTCACCTGGAACAAAACCATAAAATACCTTCCCAATTCCCTATGCAAGCTCATAAACCTTCAGACACTTGATCTTTATCGAAGTGACCAACTAATCGAGTTGCCGAGAGATGTAAACAAGTTAATCAGCCTCAGGTACCTGAGTTTGACATCGAAGCAAAAGCAGTTGCCAGAAGCAGGACTTCGTGGCTGGGCTTCACTAACATCCCTGCAGCTTCACTCATGTAGTGAACTAACATCACTGTCAGAAGGGATTGGCTCGTTGACTGCCCTACAGATGCTGTGGATCAGTGATTGCCCAAAGCTTCCTTCTCTCCCAGCCAGCATGACACACCTCTCCAGTCTGCGAGAGCTGTTCATCGACAATTGCCCGGAGCTGGATTTGATGCATCCAGAGGAGGCCATGGATGGGCTATGGAGTCTTCGATCATTGCAGATCATTGGACTTCCAAAGCTAGAGCGTCTTCCTGACACTCTTTGTTCTGCCTCGGGTTCTCTTCGGTATTTATTGATTGAGCAATGCCCCAATCTAAGGGAGCTTCCAAGCTTCATGCAAGATCTCACTAACCATCAGAGGCAGGGGGGTATTCATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032258