Os11g0100300

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Revision as of 08:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0100300| Description = Conserved hypothetical protein| Version = NM_001189364.1 GI:297727858 GeneID:9272298| Length = 2964 bp| Definition ...")
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Gene Name

Os11g0100300

Description

Conserved hypothetical protein

Version

NM_001189364.1 GI:297727858 GeneID:9272298

Length

2964 bp

Definition

Oryza sativa Japonica Group Os11g0100300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6099..9062

Sequence Coding Region

6099..7766,8193..9062

Expression

GEO Profiles:Os11g0100300

Genome Context

<gbrowseImage1> name=NC_008404:6099..9062 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:6099..9062 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaccgtcgtcggcggccaccaccggcggcgccgtccataaaccaattatcatgccgcccgagtcggagaggcagatcaataatcttccagacgtactgcagccccgccggcggtggcggtcctcgctcgccacgggcttccgctcggccctggcctgcaccatcgtcggcgtggcctccatctacgctccgctcgtcatccgccgccacctcaccttcccggccttctcttacgtagtcaccgtcatcgtagtcaccgacgccacgctgggcagctccctgcgcggcgccctcagcgcggtccacgccacggccatgggcgcagttccatcggtgctgccactctggctggcgcaccgcaccggcgccggggagtcggtgctggcgacgacggcggtggtggcgctgagcacgttcgcggtggcggtggcggggtcggcggggacggtggcgaagcggatcgcgctggggcagatcatcatcatatacgtggcgaggttcagggaggagagaatgcggtcggaggcggtgctgctgcatccggcaaacgtggtggcgtgcacggcgctcggggtggtggcggcgctgctgggcgtgctgctcccctgcccgaggctggccacgcgcgacgccacggacaagaggctcgcctacttggaggtggcggcggagagggtcaggctgctggccgacgccttccagttgcacttctccagcgacgaggctgcaggtgatgatgaggagagagcatcatcttgtcgttgccgcagacggcggcggcagtgcgtggccgcgtgcatcatgtcgcaggccgaccgcgcagcctccgccggcgccctcctcctccgccgcataagctccgcacaaggtgacttgcagtgggagcgaatgccggcgctgctgaaacggtggtgcagcagcaggtgggatgacgacgacgaacaagcttgtgcgcggctgcacgagttgatcgagatgcctctgcgagggatggagatggcctgcacccacatgctgcagcagccatgttggcctaacactaacactatcagcagcatctgcacgacaccaacatggctgcagcacgctaccgaccatgtacgcctggctttgctcacaaaacgcattcccagctgcagcaacacaggcacaggcagcatggagatggccaaactagcgccggtctctgttggtgctctggagcagcagcagcagctggctcctttcctcttcttcttatgcttggatctcctcctccaaggatctcatccggcgccccaacgtccacctaagctgctgctgtctgtgtctgcacactcagacgctgctgcctcccaagtgaaggtgatcccagcagcaacaacaaaagacgacgatgaagagcaaccggagcagacgaggaagaagaaacaccagtgccctcggcaaacgacaagaagcaccatgaggaggaggctggtggccgcggccaagtgcagcttctcgctgggcctcgccgtcctgctcggcctgctcttcagcagcgaccacggcttctggtcggggctcgtcgtggccaccaccatggccaccggccgcgagtggacctgggctctcgccattgcgcgtgctcacggcaccgctctcggatccgtatatggcgcgctggcctgccttgtcatcgatcgcatggagctgcgcttcctcgccctgctcccctggctcatcctcactgccggcttcctcaagcgcagtcgtgcctacggccccgctggcgctgggggtgtagcagctgcggtgtctggcatcatcatcgttggccgccgctacgacgagccgcccatggccttcaccgtcgcacgcctggtggagaccttcataggcctcgcctgcatcatcgtggccgacctcgtcttccagcccgccgccaggccgtccaccaaggccacggcacagctcgaccgctgcctcgccgcactcaaaggctgcttcagtcggggacgacagacgacgaccaaagtgaaggtgaaggcggtgcaggagcaggtggccctgctggagagatgcgtggcagaggctgccggcgagccccatttcccgtggtcgccgccgttcccggcgagctgctaccacaaggtggcggggagccttggcaggatggcgcagctgctctacctctacacacaggcacatccaactccaataccagcagcagacgaggatgcaacgcagcgcttccactgcctcgtctccgcatccctggagcgaagcgccgacctcctcctccgactcagtcgtatcagcagcagcagcagcagagacgaggaggacctggaggccggcatccgggtcagcagcggcagtgacacctgttgctgtgacgacgaggatgcaccagagatgctggtgcggtcgttcctgtcacagcagcagcagcagcaagatcaaggagtagcattagcattggcttccattgggttctgcatgggagagatggccaaggaggccctccagctggaggcctacatgctcgacctcatactcctcgctcattag</cdnaseq>

Protein Sequence

<aaseq>MPPSSAATTGGAVHKPIIMPPESERQINNLPDVLQPRRRWRSSL ATGFRSALACTIVGVASIYAPLVIRRHLTFPAFSYVVTVIVVTDATLGSSLRGALSAV HATAMGAVPSVLPLWLAHRTGAGESVLATTAVVALSTFAVAVAGSAGTVAKRIALGQI IIIYVARFREERMRSEAVLLHPANVVACTALGVVAALLGVLLPCPRLATRDATDKRLA YLEVAAERVRLLADAFQLHFSSDEAAGDDEERASSCRCRRRRRQCVAACIMSQADRAA SAGALLLRRISSAQGDLQWERMPALLKRWCSSRWDDDDEQACARLHELIEMPLRGMEM ACTHMLQQPCWPNTNTISSICTTPTWLQHATDHVRLALLTKRIPSCSNTGTGSMEMAK LAPVSVGALEQQQQLAPFLFFLCLDLLLQGSHPAPQRPPKLLLSVSAHSDAAASQVKV IPAATTKDDDEEQPEQTRKKKHQCPRQTTRSTMRRRLVAAAKCSFSLGLAVLLGLLFS SDHGFWSGLVVATTMATGREWTWALAIARAHGTALGSVYGALACLVIDRMELRFLALL PWLILTAGFLKRSRAYGPAGAGGVAAAVSGIIIVGRRYDEPPMAFTVARLVETFIGLA CIIVADLVFQPAARPSTKATAQLDRCLAALKGCFSRGRQTTTKVKVKAVQEQVALLER CVAEAAGEPHFPWSPPFPASCYHKVAGSLGRMAQLLYLYTQAHPTPIPAADEDATQRF HCLVSASLERSADLLLRLSRISSSSSRDEEDLEAGIRVSSGSDTCCCDDEDAPEMLVR SFLSQQQQQQDQGVALALASIGFCMGEMAKEALQLEAYMLDLILLAH</aaseq>

Gene Sequence

<dnaseqindica>1297..2964#1..870#atgccaccgtcgtcggcggccaccaccggcggcgccgtccataaaccaattatcatgccgcccgagtcggagaggcagatcaataatcttccagacgtactgcagccccgccggcggtggcggtcctcgctcgccacgggcttccgctcggccctggcctgcaccatcgtcggcgtggcctccatctacgctccgctcgtcatccgccgccacctcaccttcccggccttctcttacgtagtcaccgtcatcgtagtcaccgacgccacgctgggcagctccctgcgcggcgccctcagcgcggtccacgccacggccatgggcgcagttccatcggtgctgccactctggctggcgcaccgcaccggcgccggggagtcggtgctggcgacgacggcggtggtggcgctgagcacgttcgcggtggcggtggcggggtcggcggggacggtggcgaagcggatcgcgctggggcagatcatcatcatatacgtggcgaggttcagggaggagagaatgcggtcggaggcggtgctgctgcatccggcaaacgtggtggcgtgcacggcgctcggggtggtggcggcgctgctgggcgtgctgctcccctgcccgaggctggccacgcgcgacgccacggacaagaggctcgcctacttggaggtggcggcggagagggtcaggctgctggccgacgccttccagttgcacttctccagcgacgaggctgcaggtgatgatgaggagagagcatcatcttgtcgttgccgcagacggcggcggcagtgcgtggccgcgtgcatcatgtcgcaggccgaccgcgcagcctccgccggcgccctcctcctccgccgcataagctccgcacaagtatgtatactatatgcgttcagcaaatcagtatactccagatagtagatgcatgcatgcagatggcccgatcgaagaagagtcgtcggaatctagtagtgctaattagttacatatgagatatgatgatcgagtgatactatatgaggagatcttaccccatggcccttgccgaaaagagatgcgagtcacactagctagttagtgcagtgagtgaccccacgagctgcaagccaccaactaggacgtactagaaatctagaatgaattgaatccactagaagccaaggaatccggcgcagtcagaaagcaagcgtcagcaaccgcactagctaggataccgatacccagctagtaggattaattacaagttaattatactaaaattaattagtattaactaagtaactatatgcatatgcgcagggtgacttgcagtgggagcgaatgccggcgctgctgaaacggtggtgcagcagcaggtgggatgacgacgacgaacaagcttgtgcgcggctgcacgagttgatcgagatgcctctgcgagggatggagatggcctgcacccacatgctgcagcagccatgttggcctaacactaacactatcagcagcatctgcacgacaccaacatggctgcagcacgctaccgaccatgtacgcctggctttgctcacaaaacgcattcccagctgcagcaacacaggcacaggcagcatggagatggccaaactagcgccggtctctgttggtgctctggagcagcagcagcagctggctcctttcctcttcttcttatgcttggatctcctcctccaaggatctcatccggcgccccaacgtccacctaagctgctgctgtctgtgtctgcacactcagacgctgctgcctcccaagtgaaggtgatcccagcagcaacaacaaaagacgacgatgaagagcaaccggagcagacgaggaagaagaaacaccagtgccctcggcaaacgacaagaagcaccatgaggaggaggctggtggccgcggccaagtgcagcttctcgctgggcctcgccgtcctgctcggcctgctcttcagcagcgaccacggcttctggtcggggctcgtcgtggccaccaccatggccaccggccgcgagtggacctgggctctcgccattgcgcgtgctcacggcaccgctctcggatccgtatatggcgcgctggcctgccttgtcatcgatcgcatggagctgcgcttcctcgccctgctcccctggctcatcctcactgccggcttcctcaagcgcagtcgtgcctacggccccgctggcgctgggggtgtagcagctgcggtgtctggcatcatcatcgttggccgccgctacgacgagccgcccatggccttcaccgtcgcacgcctggtggagaccttcataggcctcgcctgcatcatcgtggccgacctcgtcttccagcccgccgccaggccgtccaccaaggccacggcacagctcgaccgctgcctcgccgcactcaaaggctgcttcagtcggggacgacagacgacgaccaaagtgaaggtgaaggcggtgcaggagcaggtggccctgctggagagatgcgtggcagaggctgccggcgagccccatttcccgtggtcgccgccgttcccggcgagctgctaccacaaggtggcggggagccttggcaggatggcgcagctgctctacctctacacacaggcacatccaactccaataccagcagcagacgaggatgcaacgcagcgcttccactgcctcgtctccgcatccctggagcgaagcgccgacctcctcctccgactcagtcgtatcagcagcagcagcagcagagacgaggaggacctggaggccggcatccgggtcagcagcggcagtgacacctgttgctgtgacgacgaggatgcaccagagatgctggtgcggtcgttcctgtcacagcagcagcagcagcaagatcaaggagtagcattagcattggcttccattgggttctgcatgggagagatggccaaggaggccctccagctggaggcctacatgctcgacctcatactcctcgctcattag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0100300, RefSeq:Os11g0100300