Os11g0100800

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Revision as of 08:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0100800| Description = Exo70 exocyst complex subunit family protein| Version = NM_001189365.1 GI:297727860 GeneID:9269642| Length = 3900 bp...")
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Gene Name

Os11g0100800

Description

Exo70 exocyst complex subunit family protein

Version

NM_001189365.1 GI:297727860 GeneID:9269642

Length

3900 bp

Definition

Oryza sativa Japonica Group Os11g0100800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:26139..30038

Sequence Coding Region

26139..27602,29320..29522,29933..30038

Expression

GEO Profiles:Os11g0100800

Genome Context

<gbrowseImage1> name=NC_008404:26139..30038 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:26139..30038 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgagggagtggcccaagcacagcccggctgtcgggccgggtcggcacgagcacgaccccagaggtgaaatgcagcctaacagaggtggtcgaaggtggcctgatctacccgacgtcgctccacatcattgccgcctccagttcccgccgcctcatgcaccaccacctgccgcctcccctcctgccccatggttgaggtggtcgatggtgaggcgggtgccccatgggtcaacgaagaaacggtggtacctctctagcgtcaagggccctccctgcatctccctccctcgcaacctcggtgccacgcgccaccgccgcacgctgtccaccaccgtcgtcgaggaaaccatcgccgctgcggccacgctggtttccaagtggcatcctgatgaccaccactcctctctcttcctccatgcctcctccccggaggccgaccacttcctccgcgccgccgccgacctccaccgagccatgctcttcttcgcctccgaccccaccaacgcccacaacggccacggcctcgtccaggcccatcatctcctcgacacggccatgcggaggcttcagctcgagctcccacgactcctcgcaccaccacctgcaggcagtcgggaccgcctccgtgcgctcgccgacaccatgatgtccgccggctatggcaaggagtgcatctccaccttcaaggagcatcgccgcgcagcgctggccgccacgctccgccgccaacacaccaccgtgcaggtgcagctcagcaagcttacctgggagcaggtcgacgacaacatacagtcctggctcgccgcggcacgaatcgccttctcgtccgtcttccccgcggagaaggagctctgcgacactgtattcgccggtgacgcctccgtcggcgacgcggtgttcgaggacgtggccaacaaccaggcagcaaatctcctggacgtcgctgaggccgcggtggcgcgagcgcgccgcgcgccggagcggctgttccgtgtgctggacgtgcacgacgctctcaccgagatcctgcccgaaatcatgtcggtgttcggtgacaggtcagaggtggcgaagcgtggctgctctgctctgttcaaagccggtgaggcggcgcggggagcgctggccaacttggaggtggccatcgagaaggagccgtccaaggccacggtggccggcggcggagtgcacccgctgacgcgctacgtgatgaattacctcgtcttcctggccgactacgagggagcccttgaccgcataaaccagcaacagggatcgccggagagatcgtggtccatcggttggttggtgcaggtcctgatgcgcaaaattgaggccaaggcggggagctaccgagaggcggcgctgaggcacctcttcatggcgaacaacacgcactacgtggccaggaaagtggccaaaattccatctctcggggacgacgacggtgaagcccaagatgcggcgcggcggcacgtggaggcgtacgtgcgcgcggcgtggggcaaggtgctcaaggcaatcgctgcggcggacggcgtggaggtggaggaggctgtgatgcaggcggtggcgaagcaggagaagtgggtggcggcagacgaggagatgggtcaggtgctgagggcggcggcgacagcggcggtggtacccaagtacaggatgttgtaccgccggcacggggcaacgctgcggctgacgccgggggacgtcaacgccatcatcgccgcactcttcggcgggattattgcaacgcctagctcatgctga</cdnaseq>

Protein Sequence

<aaseq>MPREWPKHSPAVGPGRHEHDPRGEMQPNRGGRRWPDLPDVAPHH CRLQFPPPHAPPPAASPPAPWLRWSMVRRVPHGSTKKRWYLSSVKGPPCISLPRNLGA TRHRRTLSTTVVEETIAAAATLVSKWHPDDHHSSLFLHASSPEADHFLRAAADLHRAM LFFASDPTNAHNGHGLVQAHHLLDTAMRRLQLELPRLLAPPPAGSRDRLRALADTMMS AGYGKECISTFKEHRRAALAATLRRQHTTVQVQLSKLTWEQVDDNIQSWLAAARIAFS SVFPAEKELCDTVFAGDASVGDAVFEDVANNQAANLLDVAEAAVARARRAPERLFRVL DVHDALTEILPEIMSVFGDRSEVAKRGCSALFKAGEAARGALANLEVAIEKEPSKATV AGGGVHPLTRYVMNYLVFLADYEGALDRINQQQGSPERSWSIGWLVQVLMRKIEAKAG SYREAALRHLFMANNTHYVARKVAKIPSLGDDDGEAQDAARRHVEAYVRAAWGKVLKA IAAADGVEVEEAVMQAVAKQEKWVAADEEMGQVLRAAATAAVVPKYRMLYRRHGATLR LTPGDVNAIIAALFGGIIATPSSC</aaseq>

Gene Sequence

<dnaseqindica>2437..3900#517..719#1..106#atgccgagggagtggcccaagcacagcccggctgtcgggccgggtcggcacgagcacgaccccagaggtgaaatgcagcctaacagaggtggtcgaaggtggcctggtgagcgggcgcgcggggacgatgtcatagcactgttggggataccctctttagtcctggtttgcaacccctttagtcccaggttgcaaaccaggatgcccaatctgggactaaagattcccagttaaaataaccagaactcaccaacgccgaactaaaggtatttctcttttttttcattgttttttctacttgcatattgatttcgagccaaactcactaacgcccccacattgagttgctcccgacatcgatccccaaatctccacatcaatttgacatcacaaatcgaaaaaacatactcaacaacaaaatcatacacaaatttacaaatcaattgcatgaacatactcaacaacaaaatcatccacaaattcacaaatcatctaaaaaatcacaaatcatcatagatctacccgacgtcgctccacatcattgccgcctccagttcccgccgcctcatgcaccaccacctgccgcctcccctcctgccccatggttgaggtggtcgatggtgaggcgggtgccccatgggtcaacgaagaaacggtggtacctctctagcgtcaagggccctccctgcatctccctccctcgcaacctcggtgccacggtaggttcttccgctctgtttctctcctctccttctcctcttctctcctcttctcctcccgatgtaactctgctttacctctagtctcatcttgtttctttccactacctttgctctgcttagcgctgcacaagagaaccagggggagggagaggagtggggagggcgaagaagattggacgaggaggccgtgcgacgctataattaagggtgtgacgtgtgcgtctctcccttctctgtgcacaatctttagtcccggttggcataaacaaccgagactaaagtgtttatctttagtcccggtcggggactaaagatcctcggtagcctgacacctcctaacaacaattgaaccgggactaaaaatgatctttagtcccggttggtgaagatcataaagtggcgttgggcttttgaaccgagcctaaagatattctttagttctggtttaaatggttcttattagaatcaggacaaatgtgatttttgccatcggggcacagatcagttctccagtagtgtagatgcgaaggaggcaggaggtggagggggcgagggcaaaggcggagtcaagggagagggtgatgcgtgtgtagtgtcggcgagggtggagggaggcggaggcaatgggtacatgagaatcatcaacaaggaggccacgttgagggtgatcacgagcatgatgccggagtagctgaggtcgaaagcgcaggcgattgcgctagtgttggtaggtttggagttgttggcgggcagggaggggggagaggggaggatgctgaggtcgaagaagaagctggcgggcgccatggtggacagtggcggccggagggattccattagatatgtactccctccggttccatattaattggcgttttggacaagattgaggtcaaacttttataatttagactattaataactttaaaaatatttagtttaaaggaactagaacaacatatatagatttgtcttttaaagtactataataaaaataaatatgtatttatttattatatatattataatagaaaaataaggtaaaagatgtatcttgtaaaccgtgtcattgtccaaaacgtcaattaaaatgaaaccggagagagtatataggcagtgggtagagaagcccttgggcctttccctatatggacaaagtccaccttgactccctcaatgaactcgagatggaaagttgactctttcctcccgataacagccatcaggcctaagcttgtaatgaaaatgagtcctatgcctactctgttattactagtttgtgtgtatgttgtaatgaaatttagggcaaccaactgtgttactttccttcctcgtgcttatcaaccaactcaactctttcattcatcatactgtgtaatatatttttgtcgtaaataaacaagaattagtaattaagaaagaaaaaaaaacaccaagtagcagcatcggaaagaatgatccttcgctgattgtttgttaggttgtgtacgttcttgccgttgccggccacataggaaaataaaattcttgagcttgacccgatcaaacaacaagaccaagataacaagaggggctacttgcaagaaacaaatttgctgactgcaaacacgcttgctagcgagggagtacctgtctatctcgagtcgagtatatagctctggtagccgccacaacaacggagcagatgatgagtcgattgatcggcgatatgcagcgccaccgccgcacgctgtccaccaccgtcgtcgaggaaaccatcgccgctgcggccacgctggtttccaagtggcatcctgatgaccaccactcctctctcttcctccatgcctcctccccggaggccgaccacttcctccgcgccgccgccgacctccaccgagccatgctcttcttcgcctccgaccccaccaacgcccacaacggccacggcctcgtccaggcccatcatctcctcgacacggccatgcggaggcttcagctcgagctcccacgactcctcgcaccaccacctgcaggcagtcgggaccgcctccgtgcgctcgccgacaccatgatgtccgccggctatggcaaggagtgcatctccaccttcaaggagcatcgccgcgcagcgctggccgccacgctccgccgccaacacaccaccgtgcaggtgcagctcagcaagcttacctgggagcaggtcgacgacaacatacagtcctggctcgccgcggcacgaatcgccttctcgtccgtcttccccgcggagaaggagctctgcgacactgtattcgccggtgacgcctccgtcggcgacgcggtgttcgaggacgtggccaacaaccaggcagcaaatctcctggacgtcgctgaggccgcggtggcgcgagcgcgccgcgcgccggagcggctgttccgtgtgctggacgtgcacgacgctctcaccgagatcctgcccgaaatcatgtcggtgttcggtgacaggtcagaggtggcgaagcgtggctgctctgctctgttcaaagccggtgaggcggcgcggggagcgctggccaacttggaggtggccatcgagaaggagccgtccaaggccacggtggccggcggcggagtgcacccgctgacgcgctacgtgatgaattacctcgtcttcctggccgactacgagggagcccttgaccgcataaaccagcaacagggatcgccggagagatcgtggtccatcggttggttggtgcaggtcctgatgcgcaaaattgaggccaaggcggggagctaccgagaggcggcgctgaggcacctcttcatggcgaacaacacgcactacgtggccaggaaagtggccaaaattccatctctcggggacgacgacggtgaagcccaagatgcggcgcggcggcacgtggaggcgtacgtgcgcgcggcgtggggcaaggtgctcaaggcaatcgctgcggcggacggcgtggaggtggaggaggctgtgatgcaggcggtggcgaagcaggagaagtgggtggcggcagacgaggagatgggtcaggtgctgagggcggcggcgacagcggcggtggtacccaagtacaggatgttgtaccgccggcacggggcaacgctgcggctgacgccgggggacgtcaacgccatcatcgccgcactcttcggcgggattattgcaacgcctagctcatgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0100800, RefSeq:Os11g0100800