BGIOSGA032304

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Revision as of 04:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032304| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032304, complete gene.| tag = P0450E0...")
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Gene Name

BGIOSGA032304

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032304, complete gene.

LocusTag

P0450E05.7

Ensembl Transcript ID

BGIOSGA032304-TA

Ensembl Protein ID

BGIOSGA032304-PA

Length

4329

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2245392..2249720

Sequence Coding Region

2249600..2249720,2248951..2249045),complement(2248330..2248387,2248016..2248210),complement(2247655..2247731
,2247297..2247379),complement(2246978..2247029,2246713..2246781),complement(2246549..2246635
,2246387..2246451),complement(2245857..2246000,2245750..2245783),complement(2245392..2245541

Genome Context

<gbrowseImage1> name=IndicaChromosome10:2245392..2249720 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:2245392..2249720 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGGCGGCGGCGAGGTGGCTGCGGCGGGAGGTGTTCGTGGGGCTCGCGCTGGGGCAGTTCGTCTCGCTGCTCATCACCTCCACCGGCTTCTCCTCCTCCGAGCTCGCCCGCCGAGGCGTCAACGCGCCAACTTCGCAGTCTCTGCTGAATTACGTCCTTCTTGCGCTTGTTTATGGTGGGATACTGATCTACAGAAGGCAACACCTGACGATTAAATGGTACTACTTCTTGATCCTTGGCATCGTTGATGTAGAAGCTAACTATATTGTTGTGAAGGCTTATCAGTATACATCCTTAACGAGTGTGATGCTCATCGATTGCTGGGCGATCCCGTGTGTCATTCTCCTCACTTGGGTCTTCTTGAAGACAAAGTATGGATTGAGGAAGTTCATCGGTGTTGTGATTTGTGTGGCTGGCATTATATTGGTAGTATTTTCTGATGTCCATGCCTCTGATAGAGCAAAAGGACCCAACCCCTTGAAAGGTGATTTGTTTGTCATTTCTGGGGCCATGCTTTATGCTGTCAGTAATGTTACCGAGGAGTACTTTGTCAAGAAAAGCAGCAGAATTGAGGTGATGGCAATGCTGGGCGTTTTTGGAGCAGTTATAAGTGGTATACAAATAAGCATACTTGAACGACAAGAACTTCGGTCAACCGAATGGAATGCTGGTGCGATTCTACCTTTCATTGGATTTGCGGCAGCAATGTTCTTGTTCTACTCAACAGTACCGATTATATTGAAGATATGTGGTGCAACTATGCTCAATCTCTCCCTTTTGACCTCGGACATGTGGGCTGTTCTAATCCGTATCTTCGCTTACCATGAGAAGGTTGATTGGATGTATTTCGTTGCTTTTGCTGGCACGGCAGCTGGCCTTGTCATCTACTCATACAAGGGCTCCAAGAAGGTGGCGGAGGAGACGGCGCAGGTCGCCGGCGCGACGGACGAGGAGGCCGCGACGCGAGTTGCCGGCGCCGGAGACGATGAGCCAGCCTCCACCAACAAGGAGGTCTCCTCGTTGGCTGCTACTACCTCAAGTGTGATAGCTGGTAGCCTGGTACATATGGGCAAGAGAGATTTCTATGGAGGCTCTGATGTACAGAGTATTTCAGGCAGTCAGTTTCAACATTGTGCCAGCCAGAGTATAGAATGGGCATGGCTAGTGAAGAGAGTCGAGGTGATCCAAAATATAACAAATATAAAGTTAGCTAGTGCAAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAPAAARWLRREVFVGLALGQFVSLLITSTGFSSSELARRGVNAPTSQSLLNYVLLALVYGGILIYRRQHLTIKWYYFLILGIVDVEANYIVVKAYQYTSLTSVMLIDCWAIPCVILLTWVFLKTKYGLRKFIGVVICVAGIILVVFSDVHASDRAKGPNPLKGDLFVISGAMLYAVSNVTEEYFVKKSSRIEVMAMLGVFGAVISGIQISILERQELRSTEWNAGAILPFIGFAAAMFLFYSTVPIILKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDWMYFVAFAGTAAGLVIYSYKGSKKVAEETAQVAGATDEEAATRVAGAGDDEPASTNKEVSSLAATTSSVIAGSLVHMGKRDFYGGSDVQSISGSQFQHCASQSIEWAWLVKRVEVIQNITNIKLASAK</aaseq>

Gene Sequence

<dnaseqindica>1..121#676..770#1334..1391#1511..1705#1990..2066#2342..2424#2692..2743#2940..3008#3086..3172#3270..3334#3721..3864#3938..3971#4180..4329#ATGGCGCCGGCGGCGGCGAGGTGGCTGCGGCGGGAGGTGTTCGTGGGGCTCGCGCTGGGGCAGTTCGTCTCGCTGCTCATCACCTCCACCGGCTTCTCCTCCTCCGAGCTCGCCCGCCGAGGTACGGCTTGCCGCCGCCGCCGCATGATGTTCGCGTATTCGCTCGATAGGGCTTTTGTTTGAAACTAACAACTGGATGTTGGTATGATGGTATCGATCTATCTGAAATCTGAACTCTGAAAATAGCTGGGTTCTTGATGAGTTGCAGTTTCAGTTTTGATGAGCTTTTGGTTCAGAATGTATTCATGCAATCTGAAATCTGAAAATAGTTGGGTTCTTGATGAGTTGCAGTTTCAGTTTTGATGAGCTTTTGGTTCAGAATGTATTCATGCAATCTGAACTCTGAAAATAGTTGGGTTCTTGATGAGTTGCAGTTTCAGTTTTGATGAGCTTTTGGTTCAGAATGTATTCGTGCAATTGGCTTGTATTATACGTGGTCATTTTGGTTCTTTTTTTTGTTCATTTTCTTGGTAGATGAATGACCATGTTTCGAATTTCATAATCTTTGAAAATTATTATGTTGTTACAAACCATGCCATGTTCAGATATAGAGAGTTGTGAATGGTGGGTTACGAAGTTCTGATTATGAGATTGAATCCTGCGCATTGTTTTCAGGCGTCAACGCGCCAACTTCGCAGTCTCTGCTGAATTACGTCCTTCTTGCGCTTGTTTATGGTGGGATACTGATCTACAGAAGGCAACACCTGACGGTATGTCTGCCTGCTGCGTTTTGCCCTGAAAAGAAATGTTTGGATGCAATTTTGGCTATTTTTTAGATCAAAATTCGGTTATGATTTTGATATCTGGAGACTGGAAATGGTGAAACCAAAGGTCAATAAGCTATTATGGTGTTTAACAACACATGTCCTGTGCCCCTGGCCTGACCTTCAGATTATTATTCCCTAGGACCATTATTTTGAGTTGTGCTGTTCCTCTTTTTTTCGTATGATTGATGCATGTACGTTGCGTATTTAGCGTATCTTATCCCCAAGCCAGGACCAATGACAAGTCACTTTGTTACCAAACATATTTATGCTTATTCTGATTATGTTCTTCGCAAGTTGCTGAGGCTGTTTGATAGGCTAAGTTCCTAATTTAAAAAGGTTGCATATATCCGATTGGATGTAGAGGCCGGGTAAAAAATACCCTTCTCTAAAAAAAAAAAGTTTCTGAGGCTGTTTTGTTGTCACCACGGTATTATATTGCAATGCAGCAATCTGAATATTTTTATCAGCATGGAGCTTGAAATGTTTTCTGCATTTTGTTTCTGCAGATTAAATGGTACTACTTCTTGATCCTTGGCATCGTTGATGTAGAAGCTAACTATATTGGTAAATGTCTACCATTAGTGAAAATAATGTAATCTGAATTTCTTACTGAGATTGGAGCTTCTTTTTAGTTAGTAACTTCATGTGAAGATTCTAAACTTGACTTGTATTTGTTCACACAGTTGTGAAGGCTTATCAGTATACATCCTTAACGAGTGTGATGCTCATCGATTGCTGGGCGATCCCGTGTGTCATTCTCCTCACTTGGGTCTTCTTGAAGACAAAGTATGGATTGAGGAAGTTCATCGGTGTTGTGATTTGTGTGGCTGGCATTATATTGGTAGTATTTTCTGATGTCCATGCCTCTGATAGAGCAAGTAAGAACATGATTCCAATGAAAGTTTACTCAACTCACACAATTATACACTTATATACATCTGCTTGGCATGCCGTTATCTGTTCAGTTTCTGCGTTTTATTTTGGTGCTGCATTGCTCTGTTTCATGTAGTCTTTGCAATGTGTACTTGATTCTCAGCACAAAGGCACAAAGCTCTTCTGAAATGTGGCAAATAGATTATAAAGAAAATACAGTATTTTGCACTTGTCAGTAAAAGAATAACAAGTAAATCATGTTGACCTTACACAATGGAGTGTCTTGCAGAAGGACCCAACCCCTTGAAAGGTGATTTGTTTGTCATTTCTGGGGCCATGCTTTATGCTGTCAGTAATGTTACCGAGGTAATAGCAAATCTATAGTTCGTTTATTACTATTTATTTTCCATTTCTTTTCAGAACACAGGGGAGAACTCCCAGTTCTAGATTTTTCACATGTTCTTTGAGATTTTAATGAAATTGGTCGACCAAATCTTTCGGCCGACCCGGCAAAAAACATGTTCTTTGAGATATGATAATTACCACTTCAAATATTAGCCTTGACAGCCCATCGGATTAAGCATAAAACTAAATTAGGTAGCACATGAAGAACCTTGCATGTTTTGCCTACAACATTTCAGGAGTACTTTGTCAAGAAAAGCAGCAGAATTGAGGTGATGGCAATGCTGGGCGTTTTTGGAGCAGTTATAAGTGGTATACAAATGTATCCTTTGGATTAGTTAAGTGATGACTTGTTTCCACTGTAGTTTGATTAAACTAAGAATATTATAAGAATGCCTCTCCATGTTACTAGAAGTTAAAACAAGGGAAATTACTTGAATAGCAACGAGACCAAAACAATGAACCAGTGAAACTGGGACATGTTTCTACCAACCCATCTGTAACTATTTTGTACTTTGTATTACCTGATTTATATTTGGCATAGCAAGAAAATATGCTTCTATATCCCATTTCCTTAACACTGCTACAGAAGCATACTTGAACGACAAGAACTTCGGTCAACCGAATGGAATGCTGGTGCGGTAAGTCGATCTCCTCCCTTTCATACATGGTACTCGAGGCAATTTATATGGTCCAAATATTTTAATTGATAAATTATTGTTCAGTTCTAGATTATTTTAATTCTTGTGTGTACAATCTAATAAGCTTGAAGAATATGTTCTATTACATAATCAATTAACCATGCTTCGTATTCATGGACCCTTTTTTTTTCTTCAGATTCTACCTTTCATTGGATTTGCGGCAGCAATGTTCTTGTTCTACTCAACAGTACCGATTATATTGAAGGTACAGGCCATGATTGTGGGAAAATTCACAGCATTTCTGAATATTGCATGTTACTAAATTTACTCCAATAATTTCAGATATGTGGTGCAACTATGCTCAATCTCTCCCTTTTGACCTCGGACATGTGGGCTGTTCTAATCCGTATCTTCGCTTACCATGAGAAGGTCTCTGAACAACAATTCCTCCCCCCATACAGTCATGCCAATACTAAATCTTAAAATTCAAATTGATCTTGTTTAATCAAATTTTGAGCATTTGCAGGTTGATTGGATGTATTTCGTTGCTTTTGCTGGCACGGCAGCTGGCCTTGTCATCTACTCATACAAGTAAGCCTTCATTCTTCATCTGCCATTCCTTCTGAACATGCACATAAGATACATGTGTAATTTTACCATCCTTAACTTACGTCAAAAATTTTTTACCATCCTTAAAAAGGTACCTAGAGATACAATATTTTTTAGTTAAAATTTGGTATCTCTAATAAGTACTAAATATCTAAAAGTATAAAAAATGTAGTGTAAAATTTAGATATCTCAAGATACTTTTCCAAAGGAAGTAAAATTCCTCAAGATATGTACTTCATTCATCCTAAAATAAATTATTTTCTGGCCACAAACCTACACATAAGACATCGATTTATTTTCGGATGGAGGGAGTAACAATCAGCTGTGACGATATCGCTACTCATCACTGAGAAAACTCTTGCAAGCAGGGGCTCCAAGAAGGTGGCGGAGGAGACGGCGCAGGTCGCCGGCGCGACGGACGAGGAGGCCGCGACGCGAGTTGCCGGCGCCGGAGACGATGAGCCAGCCTCCACCAACAAGGAGGTCTCCTCGTTGGCTGCTACTACCTCAAGGTAGTAGTAGGCTTCTATCTGCAGCACACACTTGACACTTGTGCTGTAACTGAAAATGTTTTACCATGTACAGTGTGATAGCTGGTAGCCTGGTACATATGGGCAAGGTTTGGTGTGAACTGTGATGATGTGTGATATTTTATTACCGCCAGATAACCAAGATAGGGTTAAGAGCTAGCATAGGTTCACTGCATAATGTAAAAGTATACGTGTATCATGGCTGATTTTACTATTGTTTTGTAAACACGGAGTAATAATAGTATTTGTCAAGGTTTCTTGCCTGGATGACATGATGTTGGAATGCAAATGGTTCAGAGAGATTTCTATGGAGGCTCTGATGTACAGAGTATTTCAGGCAGTCAGTTTCAACATTGTGCCAGCCAGAGTATAGAATGGGCATGGCTAGTGAAGAGAGTCGAGGTGATCCAAAATATAACAAATATAAAGTTAGCTAGTGCAAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032304