BGIOSGA032326

From RiceWiki
Revision as of 04:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032326| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032326, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032326

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032326, complete gene.

LocusTag

OSJNBB0004A06.5

Ensembl Transcript ID

BGIOSGA032326-TA

Ensembl Protein ID

BGIOSGA032326-PA

Length

3859

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1859992..1863850

Sequence Coding Region

1862883..1863850,1859992..1861210

Genome Context

<gbrowseImage1> name=IndicaChromosome10:1859992..1863850 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:1859992..1863850 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTTGGTGGTTGGTGCTTCGACTGCCACCATGGACTCTCTCCTGGGCAAGCTGGGCAACCTTCTCGCCCAGGAGTATGATCTGATCAGGGGCGTCCGTGGTGACATCCAGTACATCAGTGACGAGCTCGCCAGCATGAAGGCCTTCCTTCTTGACCTCGCCCGGGAAGACCCTGACAACAGGAAGAAGCACTGGATGAAGCAGATCCGCGACATGGCATATGACTGTGAGGACTGCATAGATGACTTTGCTCACCGCCTCCCCAACGATTCCTTGGATGCAAAATGCTGCCCCTGGATAGTCACACTAGTGTATGACCTCTGGACGTTCGGGCCTCGCCGTGAGATTGCATCCAGTATTGCTGAGCTTAAGGTCCGGGCGCAGCTGATTGCTGACCGACGCATAAGATACGGAGTGGAAAATCCAAATACCCAAAAAGGCAAGGGCCCGCCCGATGCGACGTCTTATGACATTGCTGAGGATCAGCTCGCAAGCCATGAGCTTGGTATGAATGAGCCTGTAGGGATGGAGAAGGCCATGAAGGATCTTGAGGAGTGGGTGGACGGCACTGCTTGTCAGGAGCCTGCTGTTGTGTCCATTGTTGGATTTGGGGGTGTGGGGAAGACCACCATTGCCATGGCATTGTACAAGAAAGTCATGTATCAATTTGATTGCCGGGCGTGGGTTACTGTGTCCCAGAACTATGACCTTGATGCCGTACTCAATGATATTCTCAAGCAAATAGACCCAGATTACAGGCAGCAATGCAGCAGCAAGACTGGAACCTCTGAGAATATCAAGACACTGGCACGCTTTGGAAGCAAATTGAAGCGAGACGTGCAGCGCACAGGAAGTCTCCGTCAAAGCAGCCCTCGCAGTATTGAGGAGACCTCCAATCTAAAGCGCACAGAAACCACCGACAACAAACTCGAAAGCCAAATAAAGAAGCTCCTGGATAAAAAGAGGTATATAATCCTGGTTGACGACATATGGTCTGCAAAAACATGGAAAACAATATCAGATTATTTGTTGCTAACTGATAATAAAGAGCGCAGTAGAATAATAGTTACTTCAAGATTTCAAGCGGTTGGTTCGACCTGCTGCCGGCCAGAAAACAAGGATCTATTGTATCCGATTAGTTTCCTCAGTCCTCGTGATTCCAAGGAGCTATTCAACCGAAGTGTTTCTGAATCCAAAAGCACCAAAGATAGACACAAGGTACAGAACAATGTCCCTGGTGATTTATGGAAAAGGTGTGGGGGTCAGCCTTTGGCCATAGTTACCATGGCTGGTCTAGTGGCGTGCAACCAAGACCAGCCAAAGAGTTACTGGGCTGGACTTCACAAATTATTGCCAGAAGAGGTTTCTATTACTGCTGGGGCTCAGGAACAAGAAACTTCTCTCAATTTGGATGGGGTTACAAGGATACTTGATTGTTGCTACAATAATTTGCCTGGATATCTCAGAACCTGCTTACTGTACTTGGCAATATTTCCAAAGGGTTGGAAAATTAGTAGGAAGTGTCTGTCCAGGCGATGGATTGCTGAAGGTTTTGTCAATGCAAAGCAAGGGCTGACGGCGGAGGAAGTTGCGGAATCATACTTCAATCATATTTTAAGAAGAAAGTTGATACGTCCTGTGGAGCACAGCAGCAACGGGAAACTAAAAACCTTTCAAGTTCATGACATGGTTCTTGACTATATTGTGACCAAGGCAAGAGAAGAGAATTTTATTACTGTGGTTGGTGGTCATCTGATGATGATAGCACCCAGTAATAACAAAGTCCGTCGGCTTTCCATGCAGAGCAGCAGTTCCAAGCATGGAGATTCAACAAAAGGCATGAATCTGTCACAAGTTCGGTCACTGACCGTTTTCGGGAGCCTCACCCAGCTTCCATTCCATGCTTTCAATGACAGAATAATACAAGTCCTGGATTTTCAAGGACTGAAGGGATTCAAGAACAGGCATATGAAACACATTTGTAAGATGTTTGTGCTGAAGTATTTGAGCCTCCGAGGGACGGATATTACCCATGTTCCGCCGACGATTGTGAAGCTCGAGTATTTGGAAACTCTTGACATAAGAGAAACACGTGTTAAAGAGCTGCCGAAAGAAGTAGAGCAGCTAAAACTAATCAGCAGAATACTTGGTGGGAGTAAAAACAAAACCCACGGAAAGGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MELVVGASTATMDSLLGKLGNLLAQEYDLIRGVRGDIQYISDELASMKAFLLDLAREDPDNRKKHWMKQIRDMAYDCEDCIDDFAHRLPNDSLDAKCCPWIVTLVYDLWTFGPRREIASSIAELKVRAQLIADRRIRYGVENPNTQKGKGPPDATSYDIAEDQLASHELGMNEPVGMEKAMKDLEEWVDGTACQEPAVVSIVGFGGVGKTTIAMALYKKVMYQFDCRAWVTVSQNYDLDAVLNDILKQIDPDYRQQCSSKTGTSENIKTLARFGSKLKRDVQRTGSLRQSSPRSIEETSNLKRTETTDNKLESQIKKLLDKKRYIILVDDIWSAKTWKTISDYLLLTDNKERSRIIVTSRFQAVGSTCCRPENKDLLYPISFLSPRDSKELFNRSVSESKSTKDRHKVQNNVPGDLWKRCGGQPLAIVTMAGLVACNQDQPKSYWAGLHKLLPEEVSITAGAQEQETSLNLDGVTRILDCCYNNLPGYLRTCLLYLAIFPKGWKISRKCLSRRWIAEGFVNAKQGLTAEEVAESYFNHILRRKLIRPVEHSSNGKLKTFQVHDMVLDYIVTKAREENFITVVGGHLMMIAPSNNKVRRLSMQSSSSKHGDSTKGMNLSQVRSLTVFGSLTQLPFHAFNDRIIQVLDFQGLKGFKNRHMKHICKMFVLKYLSLRGTDITHVPPTIVKLEYLETLDIRETRVKELPKEVEQLKLISRILGGSKNKTHGKG</aaseq>

Gene Sequence

<dnaseqindica>1..968#2641..3859#ATGGAGTTGGTGGTTGGTGCTTCGACTGCCACCATGGACTCTCTCCTGGGCAAGCTGGGCAACCTTCTCGCCCAGGAGTATGATCTGATCAGGGGCGTCCGTGGTGACATCCAGTACATCAGTGACGAGCTCGCCAGCATGAAGGCCTTCCTTCTTGACCTCGCCCGGGAAGACCCTGACAACAGGAAGAAGCACTGGATGAAGCAGATCCGCGACATGGCATATGACTGTGAGGACTGCATAGATGACTTTGCTCACCGCCTCCCCAACGATTCCTTGGATGCAAAATGCTGCCCCTGGATAGTCACACTAGTGTATGACCTCTGGACGTTCGGGCCTCGCCGTGAGATTGCATCCAGTATTGCTGAGCTTAAGGTCCGGGCGCAGCTGATTGCTGACCGACGCATAAGATACGGAGTGGAAAATCCAAATACCCAAAAAGGCAAGGGCCCGCCCGATGCGACGTCTTATGACATTGCTGAGGATCAGCTCGCAAGCCATGAGCTTGGTATGAATGAGCCTGTAGGGATGGAGAAGGCCATGAAGGATCTTGAGGAGTGGGTGGACGGCACTGCTTGTCAGGAGCCTGCTGTTGTGTCCATTGTTGGATTTGGGGGTGTGGGGAAGACCACCATTGCCATGGCATTGTACAAGAAAGTCATGTATCAATTTGATTGCCGGGCGTGGGTTACTGTGTCCCAGAACTATGACCTTGATGCCGTACTCAATGATATTCTCAAGCAAATAGACCCAGATTACAGGCAGCAATGCAGCAGCAAGACTGGAACCTCTGAGAATATCAAGACACTGGCACGCTTTGGAAGCAAATTGAAGCGAGACGTGCAGCGCACAGGAAGTCTCCGTCAAAGCAGCCCTCGCAGTATTGAGGAGACCTCCAATCTAAAGCGCACAGAAACCACCGACAACAAACTCGAAAGCCAAATAAAGAAGCTCCTGGATAAAAAGAGGTGTGTACATCCATCCATCCATCTATCTACATCTATATCTATATCTATATACTAAAAGTTCATTAAACTTTCTACAAACGCTAGCTCTCAAACCGCCACGTGGTGCTCCTACAAAGACTTCTAGACCGCCACATGGCACTATCTAATCTCACCGTCGATTTTTATTTAAATTGATGGACATGATACTTTAGACCGTTAGATTAGATCTATTATTAAAAAGGTGATAGTTTTTTCTCCAAATAACATATTTAACTGGTGGCTGGGAAAAGGAAAGAGAACATAAATATATGTACGTTAATACAATCGAAAAAAAATCAAATAAAGCTTCCTACTGTTAGCCGGAAGAAAAAAATAGGGGGAAAGCTATGGATCGGACGTCCGGAGATTTGCAAATCTCTGGACGATGTTTCACTGTATATTAAATAATGTTGCAATGTTTCATCGCTCGAAAAAAAATGTTTCAACGTGAAATCTCCTAGACGATGTTCACAGTATGTCGAATGAATGTTGCAATGTTTCATTGCTCAAAAAAAAATGTTCAACACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCACCCGCGAGCGCCGGTGGCTGGTGGGAAGGAACGAGAGGAGGAGATGGCCAGTGGCCTTCCCACACTGTCGCTGCCGGTGGAGGAGGTAGAGAAGGAGGTGAGGGGAAATGGGAGGAGGAGGAGGGGAAAGGTGAGGGGAAAGGCGAGACAGAGAATGAGCGGTGGTGGGAGGTGCGGGAGAAGATAAGGACTAGAAAAAAAATCCTCGCTCGTCTCTATTAAAGTTCCGGTTATTTTATAAACCGGCACTTTTAACCTCTATGTAGGTACCGTTTTAGTTTAAAAAACCAGCACTTATGATATAGGTGCCGGTTTTCTTTAGAACCGGCACATGTAGTTACTAAAAGGTGTGGGTTTTCTATTTTGTCACTCCGCAGAGTTGGGAAAAGTTTTATAGGTGCCGGTTGTAATATTTCTAGCACCTATAGTGTCAACATCTATTTGAAGTTTTATAGTAGTTTCTCAAACTACATCAATCATATTAGGCTATATAAATTGATCCATACTTTTAGTGGAGCTTCCTGTCCCACCCAATTCATCCTCGAATAAACCATGATAATATATATGCAATTAAAATAAAGAAAAATACCTTAGTTTTACTTTACACTTACTTTTCATTGGCATGTTTTCTAAAGAAAATAAATCTACCTTCTTTTTAAATGATGAAGACGATTATAAATAATTGCTCATAGATATTACTTAAATATGATATAATATAAAGTTCAGAGGTTAGAAAATTATAAAAGCAATTAATGCTGATGAAAACAATTTACAGAGAAATCATGGTAGATGTTCTCCGGTTAATATTTTGCTCTTATAAGTATCTCAAACTTACCGTGTGATGCATGTCTGCGCATTCACGCGGGCTACCTTCCTAGTTTAAATCATTTGCTTTATTCCTTATTATTTTGTGTACGTGGTGGCACATTATGTATGTTTGTAGTTTTCAATTTATAAGCTTGTTACTGGATGATGGACTCTTCGTCTACCTCACATTGTCGTCTTCTTTTTGTTGCCAGGTATATAATCCTGGTTGACGACATATGGTCTGCAAAAACATGGAAAACAATATCAGATTATTTGTTGCTAACTGATAATAAAGAGCGCAGTAGAATAATAGTTACTTCAAGATTTCAAGCGGTTGGTTCGACCTGCTGCCGGCCAGAAAACAAGGATCTATTGTATCCGATTAGTTTCCTCAGTCCTCGTGATTCCAAGGAGCTATTCAACCGAAGTGTTTCTGAATCCAAAAGCACCAAAGATAGACACAAGGTACAGAACAATGTCCCTGGTGATTTATGGAAAAGGTGTGGGGGTCAGCCTTTGGCCATAGTTACCATGGCTGGTCTAGTGGCGTGCAACCAAGACCAGCCAAAGAGTTACTGGGCTGGACTTCACAAATTATTGCCAGAAGAGGTTTCTATTACTGCTGGGGCTCAGGAACAAGAAACTTCTCTCAATTTGGATGGGGTTACAAGGATACTTGATTGTTGCTACAATAATTTGCCTGGATATCTCAGAACCTGCTTACTGTACTTGGCAATATTTCCAAAGGGTTGGAAAATTAGTAGGAAGTGTCTGTCCAGGCGATGGATTGCTGAAGGTTTTGTCAATGCAAAGCAAGGGCTGACGGCGGAGGAAGTTGCGGAATCATACTTCAATCATATTTTAAGAAGAAAGTTGATACGTCCTGTGGAGCACAGCAGCAACGGGAAACTAAAAACCTTTCAAGTTCATGACATGGTTCTTGACTATATTGTGACCAAGGCAAGAGAAGAGAATTTTATTACTGTGGTTGGTGGTCATCTGATGATGATAGCACCCAGTAATAACAAAGTCCGTCGGCTTTCCATGCAGAGCAGCAGTTCCAAGCATGGAGATTCAACAAAAGGCATGAATCTGTCACAAGTTCGGTCACTGACCGTTTTCGGGAGCCTCACCCAGCTTCCATTCCATGCTTTCAATGACAGAATAATACAAGTCCTGGATTTTCAAGGACTGAAGGGATTCAAGAACAGGCATATGAAACACATTTGTAAGATGTTTGTGCTGAAGTATTTGAGCCTCCGAGGGACGGATATTACCCATGTTCCGCCGACGATTGTGAAGCTCGAGTATTTGGAAACTCTTGACATAAGAGAAACACGTGTTAAAGAGCTGCCGAAAGAAGTAGAGCAGCTAAAACTAATCAGCAGAATACTTGGTGGGAGTAAAAACAAAACCCACGGAAAGGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032326