BGIOSGA032330

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Revision as of 04:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032330| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032330, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA032330

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032330, complete gene.

LocusTag

OSJNBB0072F04.11

Ensembl Transcript ID

BGIOSGA032330-TA

Ensembl Protein ID

BGIOSGA032330-PA

Length

3831

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1776986..1780816

Sequence Coding Region

1779266..1780816,1776986..1778677

Genome Context

<gbrowseImage1> name=IndicaChromosome10:1776986..1780816 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:1776986..1780816 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCGATCATCGGCGTCGGCGGCGGCGGATGGACGCGCCTCCGCAGCATCGGGCACGGCGCGTCCGGCGCCACAGTGTCTCTCGCGGCGGACGACGCCTCCGGCGAGCTCTTCGTCGTGAAGTCGGCCGGTGATGCGGTCGCCGCCACGGCGAGGCAGCAGCTCCGGCGAGAGTGGAGCGTCATGTCCGGGCTCTCCTCGCCGCACGTGCTCAGGTGCCTTGGCTTTGTCCAGGCCGCCGCCGGTGCCGGCGGCGAGCACCAGCTGCTCCTCGAGTACGCGCCCGGCGGATCGCTCGCCGACGTGGTGGCGAGAAACGGGGATCGCCTCGACGAGAGCGCCTTCAGGGCGTACGCGGCGGACGTGCTCAGGGGGCTTGATTACCTCCACGGGAAGCTCGTCGTGCACGGCGACGTCAAGGGGAGTAATGTGCTCGTCGGCGCCGATGGCCGCGCCAAGCTCGCCGACTTCGGGTGCGCGAGGGTGGTGATGCCCGGTGGTTCGAAGCAGCCGGTGCTCGGCGGCACGCCGGCGTTCATGGCGCCCGAGGTGGCGCGCGGAGAGGAGCAAGGCCCGGCTGCCGACGTGTGGGCGCTGGGCTGCACCGTCATCGAGATGGCCACCGGCCGCGCCCCGTGGAGCGACATGGACGACGTGCTCGCCGCTCTCCGGATGATCGGGTACACGGACGCCGTGCCGGACCTGCCGCCATGGCTGTCACCGGAGGCGAAGGACTTCTTGCGCCGGTGCATGCAACGGCGCGCCGGCGACCGGCCCACGGCGGCGCAGCTGCTACAGCACCCGTTCGTCTCAAAGTCATGCGGTCTCAAGAAAGAAGTCGTGAAGGCGACATGGGTGTCTCCGACGAGCGCGCTCGACGCGGCGGCGGCGTTGTGGGAGTCCGAGACGTCGTCATCGACAGACGACGAGGAAGCTGACGACATGTCGAACAGCCCCACCGGCCGGATCATAGCAATGGCATCCTCCGGCGGCCAGACATTGCCGGACTGGGACTCCGACGACCATGGCTGGATCGAAGTACTCGGCACCGTCTCCATTAACATAGCAAAAAAAACAACAGCAGCAGCAGAAGATTACGAAGCTTCAGAGTCTCCGGCCAAGAGGGTGAGAGCAATGGCGTGCTCGCCGTCGTCGGTGCCGGACTGGGACTCCGACAACCATGGTTGGATCGATGTCCTCAGCGCGTCACCGGCCGACGACAATGGCGGTGCAGGGAATGCGCCTGAAGAATTCGATGTAGTGGCAGCCGCCGATCAGATTTTCGGCGAAGCTGTGGGTAGCATTGTTGTAGGAGTAGGTAGTGAACAATCTGTAGTTGTTGAGAACCAGGAGGATGAGTTCATCTCCTTGAGTTATTGCAGCGAGAGAATTTTGCTTGTAGCTGTTCATGCTGCTGATAATAATGCGGCCTCTCGAAAGGCCGGAATAAAAGAATGTTCTCATGATCCTCGTCCCTTGATCCCCAGTCGATGTGCTCATAACCTTTTTCTCTCCCTAATCTTCATACAGATCGATAATTCGAATCCTCACGCAATAAATACCCTCCTCGGCACGAGCAGCAGCATCCGCAACAAATTCACAACCCTAATCCGGAAACATCAAGAACTCAACCCAATTCGCCTCCAATTAATTCCCCAATGGCCGCGGCGATCATCGGCGTCGGCGGCGGCGGATGGACGCGCCTCCGCAGCATCGGGCACGGCGCTGTCCGGCGCCACAGTGTCTCTCGCGGCGGACGACGCCTCCGGCGAGCTCTTCGTCGTGAAGTCGGCCGGTGATGCGGTCGCCGCCACGGCGAGGCAGCAGCTCTGGCGAGAGTGGAGCGTCATGTCCGGGCTCTCCTCGCCGCACGTGCTCAGGTGCCTTGGCTTTGTCCAGGCCTCCGCCGGCGCCGGCGGCGAGCACCAGCTGCTCCTCGAGTACGCGCCCGGCGGATCGCTCGCCGACGTGGTGGCGAGAAACGGGGATCGCCTCGACGAGAGCGCCTTCAGGGCGTACGCGGCGGACGTGCTCAGGGGGCTTGATTACCTCCACGGGAAGCTCGTCGTGCACGGCGACGTCAAGGGGAGTAATGTGCTCGTCGGCGCCGATGGCCGCGCCAAGCTCGCCGACTTCGGGTGCGCGAGGGTGGTGATGCCCGGTGGTTCGAAGCAGCCGGTGCTCGGCGGCACGCCGGCGTTCATGGCGCCCGAGGTGGCGCGCGGAGAGGAGCAAGGCCCGGCTGCCGACGTGTGGGCGCTGGGCTGCACCGTCATCGAGATGGCCACCGGCCGCGCCCCGTGGAGCGACATGGACGACGTGCTCGCCGCTCTCCGGATGATCGGGTACACGGACGCCGTGCCGGACCTGCCGCCATGGCTGTCACCGGAGGCGAAGGACTTCTTGCGCCGGTGCATGCAACGGCGCGCCGGCGACCGGCCCACGGCGGCGCAGCTGCTACAGCACCCGTTCGTCTCAAAGTCATGCGGTCTCAAGAAAGAAGTCGTGAAGGCGACATGGGTGTCTCCGACGAGCGCGCTCGACGCGGCGGCGGCGTTGTGGGAGTCCGAGACGTCGTCATCGACAGACGACGAGGAAGCTGACGACATGTCGAACAGCCCCACCGGCCGGATCATAGCAATGGCATCCTCCGGCGGCCAGACATTGCCGGACTGGGACTCCGACGACCATGGCTGGATCGAAGTACTCGGCACCGTCTCCATTAACATAGCAAAAAAAACAACAGCAGCAGCAGAAGATTACGAAGCTTCAGAGTCTCCGGCCAAGAGGGTGAGAGCAATGGCGTGCTCGCCGTCGTCGGTGCCGGACTGGGACTCCGACAACCATGGTTGGATCGATGTCCTCAGCGCGTCACCGGCCGACGACAATGGCGGTGCAGGGAATGCGCCTGAAGAATTCGATGTAGTGGCAGCCGCCGATCAGATTTTCGGCGAAGCTGTGGGTAGCATTGTTGTAGGAGTAGGTAGTGAACAATCTGTAGTTGTTGAGAACCAGGAGGATGAGTTCATCTCCTTGAGTTATTGCAGCGAGAGAATTTTGCTTGTAGCTGTTCATGCTGCTGATAATAATGCGGCCTCTCGAAAGGCCGGAATAAAAGAATGTTCTCATGATCCTCGTCCCTTGATCCCCAGTCGATGTGCTCATAACCTTTTTCTCTCCCTAATCTTCATACAGATCGATAATTCGAATGTAGTCCCCTTCGCTCCGAAATATTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAIIGVGGGGWTRLRSIGHGASGATVSLAADDASGELFVVKSAGDAVAATARQQLRREWSVMSGLSSPHVLRCLGFVQAAAGAGGEHQLLLEYAPGGSLADVVARNGDRLDESAFRAYAADVLRGLDYLHGKLVVHGDVKGSNVLVGADGRAKLADFGCARVVMPGGSKQPVLGGTPAFMAPEVARGEEQGPAADVWALGCTVIEMATGRAPWSDMDDVLAALRMIGYTDAVPDLPPWLSPEAKDFLRRCMQRRAGDRPTAAQLLQHPFVSKSCGLKKEVVKATWVSPTSALDAAAALWESETSSSTDDEEADDMSNSPTGRIIAMASSGGQTLPDWDSDDHGWIEVLGTVSINIAKKTTAAAEDYEASESPAKRVRAMACSPSSVPDWDSDNHGWIDVLSASPADDNGGAGNAPEEFDVVAAADQIFGEAVGSIVVGVGSEQSVVVENQEDEFISLSYCSERILLVAVHAADNNAASRKAGIKECSHDPRPLIPSRCAHNLFLSLIFIQIDNSNPHAINTLLGTSSSIRNKFTTLIRKHQELNPIRLQLIPQWPRRSSASAAADGRASAASGTALSGATVSLAADDASGELFVVKSAGDAVAATARQQLWREWSVMSGLSSPHVLRCLGFVQASAGAGGEHQLLLEYAPGGSLADVVARNGDRLDESAFRAYAADVLRGLDYLHGKLVVHGDVKGSNVLVGADGRAKLADFGCARVVMPGGSKQPVLGGTPAFMAPEVARGEEQGPAADVWALGCTVIEMATGRAPWSDMDDVLAALRMIGYTDAVPDLPPWLSPEAKDFLRRCMQRRAGDRPTAAQLLQHPFVSKSCGLKKEVVKATWVSPTSALDAAAALWESETSSSTDDEEADDMSNSPTGRIIAMASSGGQTLPDWDSDDHGWIEVLGTVSINIAKKTTAAAEDYEASESPAKRVRAMACSPSSVPDWDSDNHGWIDVLSASPADDNGGAGNAPEEFDVVAAADQIFGEAVGSIVVGVGSEQSVVVENQEDEFISLSYCSERILLVAVHAADNNAASRKAGIKECSHDPRPLIPSRCAHNLFLSLIFIQIDNSNVVPFAPKY</aaseq>

Gene Sequence

<dnaseqindica>1..1551#2140..3831#ATGGCCGCGGCGATCATCGGCGTCGGCGGCGGCGGATGGACGCGCCTCCGCAGCATCGGGCACGGCGCGTCCGGCGCCACAGTGTCTCTCGCGGCGGACGACGCCTCCGGCGAGCTCTTCGTCGTGAAGTCGGCCGGTGATGCGGTCGCCGCCACGGCGAGGCAGCAGCTCCGGCGAGAGTGGAGCGTCATGTCCGGGCTCTCCTCGCCGCACGTGCTCAGGTGCCTTGGCTTTGTCCAGGCCGCCGCCGGTGCCGGCGGCGAGCACCAGCTGCTCCTCGAGTACGCGCCCGGCGGATCGCTCGCCGACGTGGTGGCGAGAAACGGGGATCGCCTCGACGAGAGCGCCTTCAGGGCGTACGCGGCGGACGTGCTCAGGGGGCTTGATTACCTCCACGGGAAGCTCGTCGTGCACGGCGACGTCAAGGGGAGTAATGTGCTCGTCGGCGCCGATGGCCGCGCCAAGCTCGCCGACTTCGGGTGCGCGAGGGTGGTGATGCCCGGTGGTTCGAAGCAGCCGGTGCTCGGCGGCACGCCGGCGTTCATGGCGCCCGAGGTGGCGCGCGGAGAGGAGCAAGGCCCGGCTGCCGACGTGTGGGCGCTGGGCTGCACCGTCATCGAGATGGCCACCGGCCGCGCCCCGTGGAGCGACATGGACGACGTGCTCGCCGCTCTCCGGATGATCGGGTACACGGACGCCGTGCCGGACCTGCCGCCATGGCTGTCACCGGAGGCGAAGGACTTCTTGCGCCGGTGCATGCAACGGCGCGCCGGCGACCGGCCCACGGCGGCGCAGCTGCTACAGCACCCGTTCGTCTCAAAGTCATGCGGTCTCAAGAAAGAAGTCGTGAAGGCGACATGGGTGTCTCCGACGAGCGCGCTCGACGCGGCGGCGGCGTTGTGGGAGTCCGAGACGTCGTCATCGACAGACGACGAGGAAGCTGACGACATGTCGAACAGCCCCACCGGCCGGATCATAGCAATGGCATCCTCCGGCGGCCAGACATTGCCGGACTGGGACTCCGACGACCATGGCTGGATCGAAGTACTCGGCACCGTCTCCATTAACATAGCAAAAAAAACAACAGCAGCAGCAGAAGATTACGAAGCTTCAGAGTCTCCGGCCAAGAGGGTGAGAGCAATGGCGTGCTCGCCGTCGTCGGTGCCGGACTGGGACTCCGACAACCATGGTTGGATCGATGTCCTCAGCGCGTCACCGGCCGACGACAATGGCGGTGCAGGGAATGCGCCTGAAGAATTCGATGTAGTGGCAGCCGCCGATCAGATTTTCGGCGAAGCTGTGGGTAGCATTGTTGTAGGAGTAGGTAGTGAACAATCTGTAGTTGTTGAGAACCAGGAGGATGAGTTCATCTCCTTGAGTTATTGCAGCGAGAGAATTTTGCTTGTAGCTGTTCATGCTGCTGATAATAATGCGGCCTCTCGAAAGGCCGGAATAAAAGAATGTTCTCATGATCCTCGTCCCTTGATCCCCAGTCGATGTGCTCATAACCTTTTTCTCTCCCTAATCTTCATACAGATCGATAATTCGAATGTAGTCCCCTTCGCTCCGAAATATTGACTTGTTACTCGATTAGAAGCCTCCTAGGACTATTAATCTAGGCAAAGCAGATCCCCTGTTCATAGTCATCATAGAACTACGTGACGTCTAATCAAGTACTAGCTTGGTATATTTTTTTGACAGAGCAAGGGTAGTGAGCTTTATTGGCATGGAAGGTGTTGATGTCGGAGGCCGGAACAGTGCCTCGCAGAGTCGCAGTCCAGCGTGGAGAGGTGAAGGATGAGTTGGAACGAGTCCTGCTGCACTTGAGCGCGCCGCATGGTCCCTCAGCCTGGTCGGGGGTATAGATGGCCATATGGCCCGTGGCCCGTGGCCCGGCCCAAAGCATGGCACGGCCCGACTGAGGTCGTGCCCATGCCGGCCCGACCCGACAGCCGGGCCATGCTTGGGCCACACCTTCAGCACGCTGGGCCGGCACAGCATGGCCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCAGTCAGATTACCACACGCCACTCTCGATTCCCCTGTGCGTTTCGGACTGCATGCAAGGGTGGGCCCCACATGCCAGCCTCACGCAATAAATACCCTCCTCGGCACGAGCAGCAGCATCCGCAACAAATTCACAACCCTAATCCGGAAACATCAAGAACTCAACCCAATTCGCCTCCAATTAATTCCCCAATGGCCGCGGCGATCATCGGCGTCGGCGGCGGCGGATGGACGCGCCTCCGCAGCATCGGGCACGGCGCTGTCCGGCGCCACAGTGTCTCTCGCGGCGGACGACGCCTCCGGCGAGCTCTTCGTCGTGAAGTCGGCCGGTGATGCGGTCGCCGCCACGGCGAGGCAGCAGCTCTGGCGAGAGTGGAGCGTCATGTCCGGGCTCTCCTCGCCGCACGTGCTCAGGTGCCTTGGCTTTGTCCAGGCCTCCGCCGGCGCCGGCGGCGAGCACCAGCTGCTCCTCGAGTACGCGCCCGGCGGATCGCTCGCCGACGTGGTGGCGAGAAACGGGGATCGCCTCGACGAGAGCGCCTTCAGGGCGTACGCGGCGGACGTGCTCAGGGGGCTTGATTACCTCCACGGGAAGCTCGTCGTGCACGGCGACGTCAAGGGGAGTAATGTGCTCGTCGGCGCCGATGGCCGCGCCAAGCTCGCCGACTTCGGGTGCGCGAGGGTGGTGATGCCCGGTGGTTCGAAGCAGCCGGTGCTCGGCGGCACGCCGGCGTTCATGGCGCCCGAGGTGGCGCGCGGAGAGGAGCAAGGCCCGGCTGCCGACGTGTGGGCGCTGGGCTGCACCGTCATCGAGATGGCCACCGGCCGCGCCCCGTGGAGCGACATGGACGACGTGCTCGCCGCTCTCCGGATGATCGGGTACACGGACGCCGTGCCGGACCTGCCGCCATGGCTGTCACCGGAGGCGAAGGACTTCTTGCGCCGGTGCATGCAACGGCGCGCCGGCGACCGGCCCACGGCGGCGCAGCTGCTACAGCACCCGTTCGTCTCAAAGTCATGCGGTCTCAAGAAAGAAGTCGTGAAGGCGACATGGGTGTCTCCGACGAGCGCGCTCGACGCGGCGGCGGCGTTGTGGGAGTCCGAGACGTCGTCATCGACAGACGACGAGGAAGCTGACGACATGTCGAACAGCCCCACCGGCCGGATCATAGCAATGGCATCCTCCGGCGGCCAGACATTGCCGGACTGGGACTCCGACGACCATGGCTGGATCGAAGTACTCGGCACCGTCTCCATTAACATAGCAAAAAAAACAACAGCAGCAGCAGAAGATTACGAAGCTTCAGAGTCTCCGGCCAAGAGGGTGAGAGCAATGGCGTGCTCGCCGTCGTCGGTGCCGGACTGGGACTCCGACAACCATGGTTGGATCGATGTCCTCAGCGCGTCACCGGCCGACGACAATGGCGGTGCAGGGAATGCGCCTGAAGAATTCGATGTAGTGGCAGCCGCCGATCAGATTTTCGGCGAAGCTGTGGGTAGCATTGTTGTAGGAGTAGGTAGTGAACAATCTGTAGTTGTTGAGAACCAGGAGGATGAGTTCATCTCCTTGAGTTATTGCAGCGAGAGAATTTTGCTTGTAGCTGTTCATGCTGCTGATAATAATGCGGCCTCTCGAAAGGCCGGAATAAAAGAATGTTCTCATGATCCTCGTCCCTTGATCCCCAGTCGATGTGCTCATAACCTTTTTCTCTCCCTAATCTTCATACAGATCGATAATTCGAATGTAGTCCCCTTCGCTCCGAAATATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032330