BGIOSGA032385

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Revision as of 04:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032385| Description = Transmembrane 9 superfamily protein member 1| Definition = Oryza sativa Indica Group BGIOSGA032385, complete gene.| t...")
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Gene Name

BGIOSGA032385

Description

Transmembrane 9 superfamily protein member 1

Definition

Oryza sativa Indica Group BGIOSGA032385, complete gene.

LocusTag

OJ1014H12.15

Ensembl Transcript ID

BGIOSGA032385-TA

Ensembl Protein ID

BGIOSGA032385-PA

Length

4431

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:767591..772021

Sequence Coding Region

771879..772021,771172..771212),complement(770321..770897,769981..770118),complement(769734..769890
,769130..769614),complement(768676..768887,767591..767733

Genome Context

<gbrowseImage1> name=IndicaChromosome10:767591..772021 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:767591..772021 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGAAGCTCCTCCTCCCCCTCCTCGGCCTGGTGATGTTGGTGGGGTGCGCCGCGGCGGACAGCCACCGCTACAGGCCGGGCGACGCCGTGCCGCTCTACGCCAACAAGGTCGGCCCTTTCCACAACCCCAGTGAGACGTACCGGTACTTTGACTTGCCCTTTTGTGCCCCAGAGAAAGTAAAGGACAAGATTGAAGCCCTTGGTGAAGTCCTTAATGGGGATCGTCTGGTTGATGCGCCCTACAAGCTTGATTTCCGTGTAGATTTTGATGCCAAGTCTGTTTGCAGTAGACGGCTCTCCAAGGATGATGTGGTCAAGTTCCGACACGCTGTTTCCAAGGACTACTACTTCCAGATGTACTATGATGACCTTCCCTTTTGGGGATTTATTGGGACTAAGCCAGAAAAGGCAGATGCAGGGGATAAGTATTATCTTTACAGGCACATCATCTTTGACATCCTCTACAATAAGGACCGTGTAATTGAGATCAATGTGCACACTGACCAGAACGCGGTAGTGGACTTGACAGAAGACAAGGAACTTGATGTCGAATTCCTCTATACAGCCAAGTGGAAGGAGACACAGATACCGTTTGAGAAGAGGATGGAGAAGTACTCGAGCTCATCTGTCATGCCACATCACTTGGAAGTTCACTGGTTCTCAATTGTAAACTCTTGTGTCACAGTTCTCCTCTTGACAGGATTCCTGGCAACGATCCTCATGCGTGTACTGAAGAATGATTTTGTCAAGTATTCACATGATGAGGAGGAACCTGATGACCAGGAAGAAACAGGATGGAAATATATCCATGGGGATGTCTTTCGGTTCCCCACTAACAAATCGTTATTTTCTGCTGCTCTTGGTACAGGCACTCAGCTATTTGCTCTCACAACATTTATATTCCTACTTGCACTGGTCGGAGTATTCTATCCTTACAACCGGGGTGCGCTTTTTACTGCACTCGTTGTCATTTACGCACTCACTTCAGGAATTGCTGGGTACAGTGCAACCTCTTTCTACTGTCAGCTCGAAGGAAAAAACTGGGTGAGGAACTTGCTATTGACTGGATGCCTGTTTTGTGGACCTCTCTTTCTGACATTCTGTTTCTTGAACACTGTTGCTATTGCTTACAATTCAACGGCAGCATTGCCCTTTGGTACTATCTGTGTCATTGTGCTCATATGGACGCTGGTCACATTTCCTTTGCTTGTTTTGGGAGGCATTGCTGGGAAAAACAGCAAAAATGAGTTCCAGGCTCCTTGCCGCACCACCAAATTCCCGAGAGAGGTTCCACCACTTGCCTGGTACCGGAGAACCATTCCACAGATGGCGATGGCCGGTTTTCTTCCTTTCAGTGCCATTTACATTGAGCTGTACTACATCTTTGCAAGCATCTGGGGACACAGGATCTACACAATTTACAGCATTCTGTTTATAGTCTTTATCATCCTCCTTATTGTCACAGCCTTCATTACTGTTGCTCTGACCTACTTTCAGCTTACTGCTGAAGACCACGAGTGGTGGTGGAGGTCATTCCTTTGTGGTGGATCAACTGGATTTTTCGTCTTCGCTTACTGTTTATACTACTACCGTGAACGGTCTGACATGTCTGGGTTCATGCAGACATCATTCTTCTTTGGTTACATGGCCTGCATCTGCTACGCCTTCTTCCTCATGCTGGGCATGGTTGGTTTCCGTGCCGCCTTGCTATTCGTTCGCCATATATACAAATCCATCAAATGTCAGCTAAAACAAAAGCAGCAGCAAATAGAAGAAAATCAAGAAGCGACGGGCTTCAAAGCTGCAGATGGCAGCCTAGAAGATGTGTGCAGGAACACAGATGGAAGTATCCCCAAATTATCCACAGAAGAATTTTCAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAKLLLPLLGLVMLVGCAAADSHRYRPGDAVPLYANKVGPFHNPSETYRYFDLPFCAPEKVKDKIEALGEVLNGDRLVDAPYKLDFRVDFDAKSVCSRRLSKDDVVKFRHAVSKDYYFQMYYDDLPFWGFIGTKPEKADAGDKYYLYRHIIFDILYNKDRVIEINVHTDQNAVVDLTEDKELDVEFLYTAKWKETQIPFEKRMEKYSSSSVMPHHLEVHWFSIVNSCVTVLLLTGFLATILMRVLKNDFVKYSHDEEEPDDQEETGWKYIHGDVFRFPTNKSLFSAALGTGTQLFALTTFIFLLALVGVFYPYNRGALFTALVVIYALTSGIAGYSATSFYCQLEGKNWVRNLLLTGCLFCGPLFLTFCFLNTVAIAYNSTAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKNEFQAPCRTTKFPREVPPLAWYRRTIPQMAMAGFLPFSAIYIELYYIFASIWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLTAEDHEWWWRSFLCGGSTGFFVFAYCLYYYRERSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALLFVRHIYKSIKCQLKQKQQQIEENQEATGFKAADGSLEDVCRNTDGSIPKLSTEEFSE</aaseq>

Gene Sequence

<dnaseqindica>1..143#810..850#1125..1701#1904..2041#2132..2288#2408..2892#3135..3346#4289..4431#ATGGCGGCGGCGGCGAAGCTCCTCCTCCCCCTCCTCGGCCTGGTGATGTTGGTGGGGTGCGCCGCGGCGGACAGCCACCGCTACAGGCCGGGCGACGCCGTGCCGCTCTACGCCAACAAGGTCGGCCCTTTCCACAACCCCAGGTCCGTCCGTCCGTCCGCCTCTCAATCTTCCTTATTTCAATCTTTCCTGTTCCAATCCCCACAACGAATCTATACGAGTACCAATTTAATTTGTAGGAGCAAGAATAGATTCCTTCTGAAATAGTACTGTACAAGCGATATTCTGAAATACTGCATCCTATTAACAAACATAGCGCTGTAGAAACCTGCAGAATTGTTGAAAACAAGAAATAATTTGGAATAATTCAGGATAAAAGAATTTAATTATGCAAGGGATCATTTGCTTTCTTTCAGTAGGGTAATAAACTATGATATCCATTGCTCCCAGGACAGATACTACAGAAATTTAAGACGCCCACAATGGCTCCCTATTTTGTCTTCTTTTTTCTTTCCTGGATATAATAAGTAATACCTTTAAGTGCATACCTTGCTGAATAACCAAAAAATTCTCAACATTGTTGATGTGCAGATGATATAATGGATCTCATTATCTGACAGCTGCTACTAGAGACTGCAAATATTTCTCTAGTAGCGATGCCGTCAGTTGCGCTAGATTTGTCAAATGCTTCAAGTGGATTTATACATAATTTCTTTACTACTAGTTGTTGATGTATATTGTAGAGTGAATCACAGATGTACAAGGTTCAGCTTTATTTTATTCTCACACATTGATTTTGCCCCTTTCAGTGAGACGTACCGGTACTTTGACTTGCCCTTTTGTGCCCCAGGTTAGATTCTCCCTAATTAATTAAGGTGTTGCTAGCTGTAATCTGCCTTATGTTTACTTAGTGAACTGTGTCATCTCCCAATTGGAGGCCATTGACTTCTTTACTATAAACAAGAAAGATTCTTTGCAATTAAGCTGAATTTTGATTCCTAACACCTTCTAGTACAGAACTAGACTTGTTTTTCTGATGCTTATTCAGTTTTACAGAAAGATGAAGTTCTGACTTAACCTCCATTCTCTTTTAATCAAGTTATCTGTGTTGTCATCAACTACAGAGAAAGTAAAGGACAAGATTGAAGCCCTTGGTGAAGTCCTTAATGGGGATCGTCTGGTTGATGCGCCCTACAAGCTTGATTTCCGTGTAGATTTTGATGCCAAGTCTGTTTGCAGTAGACGGCTCTCCAAGGATGATGTGGTCAAGTTCCGACACGCTGTTTCCAAGGACTACTACTTCCAGATGTACTATGATGACCTTCCCTTTTGGGGATTTATTGGGACTAAGCCAGAAAAGGCAGATGCAGGGGATAAGTATTATCTTTACAGGCACATCATCTTTGACATCCTCTACAATAAGGACCGTGTAATTGAGATCAATGTGCACACTGACCAGAACGCGGTAGTGGACTTGACAGAAGACAAGGAACTTGATGTCGAATTCCTCTATACAGCCAAGTGGAAGGAGACACAGATACCGTTTGAGAAGAGGATGGAGAAGTACTCGAGCTCATCTGTCATGCCACATCACTTGGAAGTTCACTGGTTCTCAATTGTAAACTCTTGTGTCACAGTTCTCCTCTTGACAGGATTCCTGGCAACGATCCTCATGCGTGTACTGAAGAATGATTTTGTCAAGTAAGTTATCATTTCCTATCCTTTGTGGTGATTGATTCGAAGATTGAAATTTTTTCTAGTGACAATATAGATAGGTTTTTATATATTGGGATTCTCTAGCTTCATTCATAACTAAGAACAAAATATCCTGGACACTTGTTTATATAGCTTCATTCGTAGCTTTGATTTCTCAAGGTTTCTATTAATACTATTCCCTTTGAAGGTATTCACATGATGAGGAGGAACCTGATGACCAGGAAGAAACAGGATGGAAATATATCCATGGGGATGTCTTTCGGTTCCCCACTAACAAATCGTTATTTTCTGCTGCTCTTGGTACAGGCACTCAGCTATTTGCTCTGTAAGTCCCTATTAGTTTTACACACTGAATTTCCTATAGTGTTAGTTTTTTAACGGACTTATCTAACAATTCATATGCTGGCCTATGCAGCACAACATTTATATTCCTACTTGCACTGGTCGGAGTATTCTATCCTTACAACCGGGGTGCGCTTTTTACTGCACTCGTTGTCATTTACGCACTCACTTCAGGAATTGCTGGGTACAGTGCAACCTCTTTCTACTGTCAGCTCGAAGGAAAAAACTGGGTATGTTCTATTATCTATATTACAGATTAGCATTGCATAAATGCCTTGGAATCAGGGGTCGTATTATCTTGTTATTCCTATTTTCTGCCAATTAACATCTTAGTTTCTTCTGTTTGTAGGTGAGGAACTTGCTATTGACTGGATGCCTGTTTTGTGGACCTCTCTTTCTGACATTCTGTTTCTTGAACACTGTTGCTATTGCTTACAATTCAACGGCAGCATTGCCCTTTGGTACTATCTGTGTCATTGTGCTCATATGGACGCTGGTCACATTTCCTTTGCTTGTTTTGGGAGGCATTGCTGGGAAAAACAGCAAAAATGAGTTCCAGGCTCCTTGCCGCACCACCAAATTCCCGAGAGAGGTTCCACCACTTGCCTGGTACCGGAGAACCATTCCACAGATGGCGATGGCCGGTTTTCTTCCTTTCAGTGCCATTTACATTGAGCTGTACTACATCTTTGCAAGCATCTGGGGACACAGGATCTACACAATTTACAGCATTCTGTTTATAGTCTTTATCATCCTCCTTATTGTCACAGCCTTCATTACTGTTGCTCTGACCTACTTTCAGCTTACTGCTGAAGACCACGAGTGGTGGTGGAGGTATGCATTCTTTCACCTTCTACTGTTGTACTTGCTGGATTGCATATGATTTCCATTCTAGCATCAAAACAGAGTTGTCTTCATTTAAAAAAAAAAACAGAGTTGTCTTCCTCATTAGATATCACAGTAATTGTGTGTTTTCTGCCAATTGGTTGTCTCTCAGGAGTTCAAGAAGCCATTCCCTGCTATGCCTTGCAAGTTCTAATGCATCTTATCCTTTCTTTTTTTTTCCTCTGATGCAGGTCATTCCTTTGTGGTGGATCAACTGGATTTTTCGTCTTCGCTTACTGTTTATACTACTACCGTGAACGGTCTGACATGTCTGGGTTCATGCAGACATCATTCTTCTTTGGTTACATGGCCTGCATCTGCTACGCCTTCTTCCTCATGCTGGGCATGGTTGGTTTCCGTGCCGCCTTGCTATTCGTTCGCCATATATACAAATCCATCAAATGTGAGTAGACTATGCATAGTTGGTGAAGGCCAGAGATGAAAGAAACCAGAGGTAGCTGATGCAATCGATTAGCCATTATTCATAGCAAAAGGTAGTGAGCAGTAAATCTGTTCCATTTTGTACGACTGATGTGGTGAATTTTGTGGCTCTTTTTTTATGTGTTTGTCCTTGTAATTTGCATCATTGTTGAAGGAATCGTGCTTAGCAATTTTACACCATTCCATTCCCTTGATGTTGAGAGACAGTGCTGATGAATTTTGTAAGAATTCAGAGGAGCAACCTCTTGAATATTATAGCCTGAAAGCTTGATCCAAAACAAACCAATAGAAACTATGACATCTGTAATTGTTTTGTTACCCTTGAGTGACCACTATAGTCTCTATAAACACTTGCAACATGTGGTACTCCATATTTTAACTTTCGGTTTGATAGACCAGTCGTTCAACATAGTTTTTAAAGTTAAAATTAGTTATCTGAAAACACTTGTTGCAAACAATGGTATTTGATAAACTAATCATTCAAAATAATTTTAAAGTTCCAATTCTGTTATGTATATCATGACCTATGAACTGAAAGAACACACGAATTAAAGCAATGGCAAATTATGGTACTTGATTAAAGCAATGACAAGCACACGAATAACAGGAACAGCTCCTTTCAGGAATGTTACATCGTCCAGAAATATCAGCAGGATGCTCATAGAATTTTCCTTCAGACTAAAACATATATTAGCAATGCCCAGAAACAACTCCACAGCTGGAGTTGTCAGAGAAGCTACAGCAATTTGCGATTCAATGACTGAATCGACAGGAAAGTTGCAAGATGACGAACAGTATAGTAGTAACATTTAGAATGCAGAGGAACTAACAGCTAATATAAAAACTGATCATAATCTCCCGACCTTACATCATTAGGAACATACTTTACTCTTTTCACTTTCAGGTCAGCTAAAACAAAAGCAGCAGCAAATAGAAGAAAATCAAGAAGCGACGGGCTTCAAAGCTGCAGATGGCAGCCTAGAAGATGTGTGCAGGAACACAGATGGAAGTATCCCCAAATTATCCACAGAAGAATTTTCAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032385