BGIOSGA032393

From RiceWiki
Revision as of 04:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032393| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032393, complete gene.| tag = OsI_325...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032393

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032393, complete gene.

LocusTag

OsI_32532

Ensembl Transcript ID

BGIOSGA032393-TA

Ensembl Protein ID

BGIOSGA032393-PA

Length

5961

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:539937..545897

Sequence Coding Region

545829..545897,542009..542108),complement(541690..541907,541051..541586),complement(539937..540738

Genome Context

<gbrowseImage1> name=IndicaChromosome10:539937..545897 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:539937..545897 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGGCTCCATTACTGACGCCAAGCTACCTCTTCTTCCTCTCCTCAATGGCACACCTTCTCTGCAGGAGGAAGGTCCATACACAGGCAATGGATCAGTTGATGTCAAAGGCAATCCAGCATCTAAAACACACACTGGGAAATGGAAGGCATGCTACTCTATTCTAGGTGGCGAATTTTGCGGCGCATTGGCGTACTACGCAGTAGGGACCAACCTGGTGAGCTACCTGACCAAGGTACAGGGACAGAGCAATGTCACTGCTGCTAGCAACATCGCTGCTTGGCAGGGTAACTGCTACCTCACCACAATACTCGGCGCGTTCCTCGCAGACTCCTATTGGGGAAGGCACCGCACAATCGTCGTCTCCCTGACCACCTTTACCTTTGGAATGGTTCTACTCACACTTTCAGCAGTGGTTCCACCAAACATGCACAGATCAATGGCAACCTTTCCTCGGGAGGCATTGTCCTCTCTTGGCCTCTACATGACAGCTCTGGGCTTGGGTGGCATATGGCCATGTGTGCCGACATTCGGAGCCGATCAGTTCGACGACACCGACGTTTCAGAGAAGGCGCAGAAGGAGCTCTTCTACAACTGGTACTACTTCGCTGTCAATGGCGGGTTCTTCGTCGCGAGCACGGTTATAGTGTGGGTTCAGGATAACTGTGGTTGGGGACTGGGTTTTGGGATCCCTACACTGTTCTCGGTCATCGGCGTTGTCGGATTCCTTGCGAGTATGAGGTTTTACAGGTACCAGAAACCCGGCGGTAGCACGCTTACTAGGATCTGCCAGGTTGTCGTGGCGGCGTTTCGCAAGGTCCACGTGGACGTGCCAAGTGACAGCTCTCTGCTCTATGAGATGCCAGGGAAGGAGTCTGCCATTGTTGGCAGCAGGAAGCTGATGCACACTGATGGACTCAGGTTCTTTGACCGAGCTGCCACTATCACTGCATCCGATGAAGCATCAGCTAGTCGTCCATGGAAGCTGTGCACGGTGACGCAGGTGGAGGAGATCAAGATCTTTGCGAGGATGCTCCCCATCTTCCTCACCGCAGTAATCTTCAACACCGCCGAGGCCTGCTTCCCGCTGTTCGTCGAGCAGGGAGGCGCCATGGACAACCACGTCGCCGCCGCCTTCGCCTTGCCACCGGCGTCGCTGACGACCTTCACCTGCGTCTGCATCCTCGTCCTCGCGCCGACATACGACAGGGTCCTTATGCCGGCGGTGAGCAGGCTCACCGGCGTCAAGCGCGGCCTCTCCGAGCTGCACCGCATCGGCGTCGGCATGGTCTTCGCCGTTCTCGCGCTCGCCGCCGCCGCGGCCGTCGAGACGGCGCGCCTCCGCAGCGTGGAGGCGGATGCTCCGGCGGTGAGCATCCTGTGGCAGGCGCCGCAGTACGTGCTCGTCGGGGTGGCGAAGGTGTTCGGCGTCGTTGGGTACATCGAGTTCGCGTACGAGCAGAGCCCCGACGCCATGAGGAGCTTGTGCCAGGCGTGCTCGCTCATCATGGTCACCCCCGGGAGCTACCTCCTCTCCGCCATGCTCACCATCATCAGCTCCGTCACCGGCGGCGGCGGCGGCCATGGCGGATGGATCCCGGAGAATCTGAACGAGGGACATCTCGATCGATTCTTCTGGTTGATGGCGGCGTTGCAGCTCATCAACCTCATCGCCTTCGTCTGCTGCGCTGCCACCTACAAACGCAAGCTGCCTACCACTTGA</cdnaseq>

Protein Sequence

<aaseq>MEGSITDAKLPLLPLLNGTPSLQEEGPYTGNGSVDVKGNPASKTHTGKWKACYSILGGEFCGALAYYAVGTNLVSYLTKVQGQSNVTAASNIAAWQGNCYLTTILGAFLADSYWGRHRTIVVSLTTFTFGMVLLTLSAVVPPNMHRSMATFPREALSSLGLYMTALGLGGIWPCVPTFGADQFDDTDVSEKAQKELFYNWYYFAVNGGFFVASTVIVWVQDNCGWGLGFGIPTLFSVIGVVGFLASMRFYRYQKPGGSTLTRICQVVVAAFRKVHVDVPSDSSLLYEMPGKESAIVGSRKLMHTDGLRFFDRAATITASDEASASRPWKLCTVTQVEEIKIFARMLPIFLTAVIFNTAEACFPLFVEQGGAMDNHVAAAFALPPASLTTFTCVCILVLAPTYDRVLMPAVSRLTGVKRGLSELHRIGVGMVFAVLALAAAAAVETARLRSVEADAPAVSILWQAPQYVLVGVAKVFGVVGYIEFAYEQSPDAMRSLCQACSLIMVTPGSYLLSAMLTIISSVTGGGGGHGGWIPENLNEGHLDRFFWLMAALQLINLIAFVCCAATYKRKLPTT</aaseq>

Gene Sequence

<dnaseqindica>1..69#3790..3889#3991..4208#4312..4847#5160..5961#ATGGAAGGCTCCATTACTGACGCCAAGCTACCTCTTCTTCCTCTCCTCAATGGCACACCTTCTCTGCAGGTAACCATTGCTAACCTTTCATGCATGTCTCTGCTTTCATCTTAGTTTTCTACTTTTCTTCTGGGTGAGGGTAAAAAAAATCGTTTGTTTGTTTGAGAATTGAGACGGATGGTTAAACATACCTCCTCAGTTGCATGCATTGATTTATATTTCATATGAGAAAGTTGAACTTTGTTGGTGAGATTTTTCTTTGATTTCCTTTTTCTTGGCAGATCTAGTTGTTTTTAACAAAAAAACAAGAGAATGAAAGGATGGTTTTGTACTTTTGGGAAGGGCAAGGGCAGCCGTTCGTTTTTATAACTCATTCCTACTTTCCTAGGATCGATGTGATGGTCCGGAACATTATTTTAAAACCTTGTTTTTGGCTTATATTCTGATTTTTTATGTTTGTATTTCACAATATTATAACTCACACGTTTATACAGAAAGTTTCAAATTATTTATGGTATGTACTGATTCATGCTAAGAAAAATTTGGAGCAGACGCAGAATTAAAGCTGCGAGCTTATTTGTGCTATCGATATATGCTGGCATTCCGGAATAAAAAAAACTCCTTTATGTATAAAAAAACATATTTGTTGGCATTTTCAAAGTTTATAATAATTTTTTGAAGAACACATTTATATAGACTACTGCACTGTATTGGCATGTCTTTTATTACATGCCAATAATTGATAGTATTCCTATATTTTTGTTGGGCCAGAACAACCTATTGCTCCAAATCGTTCAATGTAACTCAGGCCTTATTTGGACGGGCCAAATGAAATCATGACCCATCCCTAGCGGAACGACAGTTTTCGCAAAATCCGGTGGAAAGCCGGTAGATTCCGAACAAATTTTATAAACCAAAATTTGAATACAAATTTCTTGAATTTACCGATAAGCTCGTGAAAACCAGTCGGCTTTGGTGAAATTCCGAGCGAAATCATCGAAATTTCAATCGTTAACTAGAAAAGAGGTAAACTGAATTTTTTTTCCTTTTTTTAATTCGTTATTCTTTTTTTCCCAGTGTAAATTTCAGTAAATACACGGAATAAATCAATTTTTCTAAAAATTTATATCCCAATAGGTCCTATCAATATCATACTATTTATAAGATTTTATTTGTTTTTTTCCTTTTTTATCAATTCAAATTTGAATTTCGATGAAACTCATCGAAATCTCATACGGCTTTTACTTTCGAGCCTTGTCGAAGCTTCGAAATTTTATGTAATTCGACCGGTTTTCGTCAGAATTGTGAACCTTGGACGGGATACATGAATAGAAAATCAGTTGAGGTCTGAACTAAGGACGAAGAGAGCCATGGAAGATACCAAGTTCATGTTTGTTGTTCCATGGCCCTTGCAACCATCGGTTTGCCACTTAAGTATTACTAGCTTCCACTAACTGCCAACATGTGAGTTGCATCGCTTGTGCACTTTACTCTTTCATTAGTATTATAGATATAAACTACATTACGTTGAAAGTTAAATATAGAATTTATCGTTTTAAGGCTAACGAAAAAAAAACAATCTACTTAGGAGTTTTGGTATTTCTTTGCACGCAATTATTTGAAATTTTAACATGTATTTTCAATGAATAACTTTTGATCAAATTCATAAATATTTGAAAATATCTGAAATTTTTGGGGGAGATTTAAGTTTGCCGGTGGGGTCTGAAATTACTAAAATTTTGAACTGGAATAACAAACCCTACCTCAGAGTTAAAAGTCTTCGTTACTTTCTGTCAATTTAATAATTTCGAAAATTAGGAATCAATAAATATCGATTTGTACTAACGATTTGACTTCAGAAGAGCCCAGGAAACACAACACTGAAGAAAGCTAATGTGATCTGCCTAGAGCCAAAGCCAGTATTTATGCCATCTATATATCTCTCAATCTATTATATTATTAAAACACATTTGAAAACAGACACCACGTTCGTAGTGGGGGCTAAAAATTCCCACATTAATCGGAGAAAAAGAAAAAGAGAGTCCAAGTAGAAATATAATTTAAAAATAGCTGAAATTCGAAATTAAAAATAAGGAATAGTGAAAGAAGAGTCCATATAAGAACCCAATACGAGATTAATTAAAATTCGGAATAAAAATAAAATTAAATTCGAAGTTAGAAAAATAAAAATTAAAAAGATATTTCAAGTAGGAATAAAATTTTGAAACAATTGAAATTGGAAATAAAAATTAAAAAATATTAAAAATAGTATATATAGAACACAATACGAGATTAATTAAAATATAAAATAAAAATAAATTCAAAAGATAGAAAAAGAAAAATAAGAGCTCAATTAGAATATAATTTATAAATAACTAGAAGTTTTAATAAAAACGTAATGACTATTGAAATAAGCGGCAATCTGGAACACATGGCGAGATGAATTAAAGTTCAAAATAACAAATAAAATATATTTCAAAAATAGAAAAATAATTATAAGAGTTTAAGTAGGAATATAATTTATAAATAAAAATTATCGGAATGAAAAATATGCAATTTTTTTTAAAAAAACAGTCCATCTAGAACAGAACGATAACAAATGACAATAAAGAGGGGAGAAGCAATAGGCTTGTAAAGGAGTATAGTGCTGAAGGTTGATGGGATATCTAAAACCTATAAACAAAACCTCAAATAGAACCCCAATAATGATTAAGAGAAATGACGATGGGTATACCGTTAAGCAACATGGTCACGACGGTTGGCGGTACTTATGGAGAGTAAAAATAAAACCAATTGATAATCATGCTCGATTTTAAAATCTCAATGACAATAAGGAGGGAAAGTAGCGGGTAGGATATAGAGAAGTATAGTGGCGAAGCTACTAACGATTTGGTGAAACTTATAGAAAGTAAAAAAGAATACAAACAATAATTGTGTTCGATTTTTAAAATCCCAATGACAATAAAGAGAGGTGTCAGCAGACGGGCCATAGAATAGTAAATTGGCGATGTTTGACGATACTTCTAAAAATTATGAAAACGAAACCCAACAAGACACTGAACTCTAAAAACTATATGGCCTAATTTTTAAAGTTCTAAAAAGGATTAATAGAAGTAGTGGTAAATCGAGTAAGCAAATAAAAATGTGCCAAAGAAGTAAGGGGTAGTGACTGCCATGGCTTTTAAAAACTATAAAATTATTAGAGTCACGGGGATGATAATTTTAAATAAAATCATGTGTAAAAATATATAATTTTACATTGATGCTAGCCGCACAATTGCGCGGGCCGTCCAACTACTTCGACACAAAAGTTGCTAGGATCCCTGAAAGTCGGCGTGCTGAAAGTTGAGTACGATGACTCATTACACTTCAATAACCTTCACGCGACCTATTAAGTGTACTTAATCAACCTTAATCTCTGCTGCAAAGGCTGCAACTGTCGATCGTGTCGCACAAGCAGTTTGCTTTTTATATTCTAACGATACGAATTTCCGTGCGAAATGACATGGCAAGTGCTTCTTGTTAATGCTATCGTGGGAGCTCCTTAAAACTTACTGTCCGCTTCGTCGCCGGCGATCGAGCAGAGCATGGCAAATGAGGAGCAGCGGCAGTGGATGGACGGGGAGTTTGGCTGCCAGCCGGTTGCTAACATTTTCTTTGATTTCCTTGATTTGCCTGGAGAAATTCACAATTGCAACTTCTTTTCATTCTATGATCTCTTTTGCTCATCTGATGAGGTGTCCTAACAATCAAATGTAGGAGTAATCAAATGCTTGTGCTTGGTTGCAGGAGGAAGGTCCATACACAGGCAATGGATCAGTTGATGTCAAAGGCAATCCAGCATCTAAAACACACACTGGGAAATGGAAGGCATGCTACTCTATTCTAGGTTGAATAACACACACTGCCCAACATCTCAGTGTTCATCAATCACATTTCAGTGTTCATTTTGAACTAGTGAAGAACATGTTCTTGGCACGGTGTATGTAGGTGGCGAATTTTGCGGCGCATTGGCGTACTACGCAGTAGGGACCAACCTGGTGAGCTACCTGACCAAGGTACAGGGACAGAGCAATGTCACTGCTGCTAGCAACATCGCTGCTTGGCAGGGTAACTGCTACCTCACCACAATACTCGGCGCGTTCCTCGCAGACTCCTATTGGGGAAGGCACCGCACAATCGTCGTCTCCCTGACCACCTTTACCTTTGTAAGAGATCACAACATTTTCATATTTTTCTGAATACGAGCAAAGTTGTCTGAATATCAGTTAAGTTGTCTGAACATTTGTGTTATGTACTGTACATTTTCAGGGAATGGTTCTACTCACACTTTCAGCAGTGGTTCCACCAAACATGCACAGATCAATGGCAACCTTTCCTCGGGAGGCATTGTCCTCTCTTGGCCTCTACATGACAGCTCTGGGCTTGGGTGGCATATGGCCATGTGTGCCGACATTCGGAGCCGATCAGTTCGACGACACCGACGTTTCAGAGAAGGCGCAGAAGGAGCTCTTCTACAACTGGTACTACTTCGCTGTCAATGGCGGGTTCTTCGTCGCGAGCACGGTTATAGTGTGGGTTCAGGATAACTGTGGTTGGGGACTGGGTTTTGGGATCCCTACACTGTTCTCGGTCATCGGCGTTGTCGGATTCCTTGCGAGTATGAGGTTTTACAGGTACCAGAAACCCGGCGGTAGCACGCTTACTAGGATCTGCCAGGTTGTCGTGGCGGCGTTTCGCAAGGTCCACGTGGACGTGCCAAGTGACAGCTCTCTGCTCTATGAGATGCCAGGGAAGGAGTCTGCCATTGTTGGCAGCAGGAAGCTGATGCACACTGATGGACTCAGGTAAACTAAATTCTGCCAATTCTGATCAATTTCTGATCTCAATTCATTATGCATCATCTGCCGTAACGGGCTAACGGCAGGTGTCGTTTAACAAAATTTCGACAAAATTTTCTAAATCTTAGAATGCAATAGCATGGAAACTGGAAATTTAAATCCGAAATGTAGAATCCTGCTAAAAGTCATACTTTCAGCTTACAAAATTACAGATGGTGATCACTTATTAATCTTCACCGTACCTATATTGAGTTGTTCAGTGAACTGAAAACACAAGATCAAATTTGATGAATTTTTATCACTAATTGTTGCAATTAGGTTCTTTGACCGAGCTGCCACTATCACTGCATCCGATGAAGCATCAGCTAGTCGTCCATGGAAGCTGTGCACGGTGACGCAGGTGGAGGAGATCAAGATCTTTGCGAGGATGCTCCCCATCTTCCTCACCGCAGTAATCTTCAACACCGCCGAGGCCTGCTTCCCGCTGTTCGTCGAGCAGGGAGGCGCCATGGACAACCACGTCGCCGCCGCCTTCGCCTTGCCACCGGCGTCGCTGACGACCTTCACCTGCGTCTGCATCCTCGTCCTCGCGCCGACATACGACAGGGTCCTTATGCCGGCGGTGAGCAGGCTCACCGGCGTCAAGCGCGGCCTCTCCGAGCTGCACCGCATCGGCGTCGGCATGGTCTTCGCCGTTCTCGCGCTCGCCGCCGCCGCGGCCGTCGAGACGGCGCGCCTCCGCAGCGTGGAGGCGGATGCTCCGGCGGTGAGCATCCTGTGGCAGGCGCCGCAGTACGTGCTCGTCGGGGTGGCGAAGGTGTTCGGCGTCGTTGGGTACATCGAGTTCGCGTACGAGCAGAGCCCCGACGCCATGAGGAGCTTGTGCCAGGCGTGCTCGCTCATCATGGTCACCCCCGGGAGCTACCTCCTCTCCGCCATGCTCACCATCATCAGCTCCGTCACCGGCGGCGGCGGCGGCCATGGCGGATGGATCCCGGAGAATCTGAACGAGGGACATCTCGATCGATTCTTCTGGTTGATGGCGGCGTTGCAGCTCATCAACCTCATCGCCTTCGTCTGCTGCGCTGCCACCTACAAACGCAAGCTGCCTACCACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032393