Os11g0103100

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Revision as of 08:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0103100| Description = Conserved hypothetical protein| Version = NM_001072054.2 GI:297611024 GeneID:4349538| Length = 4194 bp| Definition ...")
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Gene Name

Os11g0103100

Description

Conserved hypothetical protein

Version

NM_001072054.2 GI:297611024 GeneID:4349538

Length

4194 bp

Definition

Oryza sativa Japonica Group Os11g0103100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:129261..133454

Sequence Coding Region

129261..129335,129565..129645,129929..130040,130131..131347,131773..131943
,132150..132253,132367..132480,132583..132724,132803..133059
,133126..133293,133421..133454

Expression

GEO Profiles:Os11g0103100

Genome Context

<gbrowseImage1> name=NC_008404:129261..133454 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:129261..133454 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgccgtgccgcatccctgcagccaccggcaacaaagagaacaatatctcccaaaatcgacaccatgtcttggattgccaaaccccgtgcgaaggcaaaggcgcggctacctctaaaaagaggaagaacaagcctgcaggggggttcaatctcagaaaaagcatcgcatggaatcctgctttcttcactgaacaaggcgttttggataacacggagctttctatgcttactggctcccaagtgaaggcaactaggagccctgcctctggattttcttctaccttttccccattgtctaggtttggaaaatctagcaatacatctgtgctcaaggaagtcggagagaattctcgtggaaaatttccttcaaaatgtttgagcgcagaaaacaagggaaggaagttgtttgcttcctcaaaagcttctgagcaggatgaacgaaaagcacccgcgggcacacaggataaaaggtcagcaaaagctgtccaaaagtccattccacgaccacctgcaggatataaatatccttatggagattctgggattattggatatgtcttgtttttttttcttaacagaatcatgccattgcctgctcaaatacaaaggataccaaagaagtctgaaccttctccttctgtggtctctagaagtagaagtacctcatctgtgacaaatgttcccaaaccaacaacaaggccagctacagttacaagtgagcgtacacataaagtagaggggctcccacttgaatcgaagactgagcgttcatctgtaattaaatcttctggacctaccatagggaagaacatggtgcctactgttactgccatctgccaagaaaccaatggttctgggaaatgtgaaactttttcaccatattcacaagataacccctccagttctgttgtcgcccctgcacgaatatctgctaagccatctgctctccggatgccttcaccttcagttggctttttcactcagggaaaagcttctgtatcacatagtgacaatgctcaaagaaatccagaaaggtgctttagtggaaatatttcatcacttgtaaaaccccccaggtataaacagcctgtggatccaaaaagcagattccatctaacaaagcagctgccaaccaatttctctgctgcttccagtcttcctgtgcaacctgccactcgtgatcccaatgtcttggcctcttctctacctggtgttgaggatactaacgttcgttcactgaagcaatccttatcagaaagtactgtaccatactcagaaaaatcagggaatataaattatcaagaaatgccagatgatgatttttcgttggctggaaatggagctactacagagttgagttttagagataatgatggtggcagaaatatcatgcccaatgagtgcagtgttgcgctgtctgtcggacaggatcttaatgctatttgctgctcaagcattgagcctgctgaggattcttgctttcttaaagtcatttgctcctcgagcgaacctaccgtggggaggaacttgacaacatcttgcatttcttctccagggtgcaccccaaatgatctcaattctcaaagcaagtctgacaatggtgaaacagcagttgacatagaaaattcactttctggagagacatctggtacagtttgttcatcagaaggcaacaattgcacttcagctacagattccttgcgaaaatccgattcctgccatcagcagaatatgctagttcagtctgtacattgtacagatcaaatgccacagtttgatagttcaacaggcataaaaccatctctagcatacagccagttagactccaacacttctttgtgtagtgaagttcagcttacttcatcagaaggaccagatattgatagtgaaatggagcttgatacagatgatgcattcactgtggaggaacctcccctgttacatgtagggggtgaatgtgaccatgattacaggagtgcagaatgttcacatatgaacctggcagcgccttcacctcgtgtagatcaaaaggcactagctggcaatttgactgaaaaagtagatacagctgacggtagaacagaatcacatcactgttcgacccaggaaagacgacctattttatcagaagaacaagatactgaagatacaattgagtttgacaccaagttgtcgtcttcagagggtgcatcaagtatagagaggattaagtcagtgggtaaatcaagaacaaataccataagtaaagatcatctaaaaaacttggtaccgtttacagaagaatggcttgctgtcatggaagcttttggagaggaagttttggaacagaagacgggcgctgtgcaaaattctcctaccgacaaagctgctccagaacctagtccatggtcaccggttaaacggaaagctcaagatgttgggccattcgactgtaccaagtattccaagaacgtcagaacaagtgactga</cdnaseq>

Protein Sequence

<aaseq>MASPCRIPAATGNKENNISQNRHHVLDCQTPCEGKGAATSKKRK NKPAGGFNLRKSIAWNPAFFTEQGVLDNTELSMLTGSQVKATRSPASGFSSTFSPLSR FGKSSNTSVLKEVGENSRGKFPSKCLSAENKGRKLFASSKASEQDERKAPAGTQDKRS AKAVQKSIPRPPAGYKYPYGDSGIIGYVLFFFLNRIMPLPAQIQRIPKKSEPSPSVVS RSRSTSSVTNVPKPTTRPATVTSERTHKVEGLPLESKTERSSVIKSSGPTIGKNMVPT VTAICQETNGSGKCETFSPYSQDNPSSSVVAPARISAKPSALRMPSPSVGFFTQGKAS VSHSDNAQRNPERCFSGNISSLVKPPRYKQPVDPKSRFHLTKQLPTNFSAASSLPVQP ATRDPNVLASSLPGVEDTNVRSLKQSLSESTVPYSEKSGNINYQEMPDDDFSLAGNGA TTELSFRDNDGGRNIMPNECSVALSVGQDLNAICCSSIEPAEDSCFLKVICSSSEPTV GRNLTTSCISSPGCTPNDLNSQSKSDNGETAVDIENSLSGETSGTVCSSEGNNCTSAT DSLRKSDSCHQQNMLVQSVHCTDQMPQFDSSTGIKPSLAYSQLDSNTSLCSEVQLTSS EGPDIDSEMELDTDDAFTVEEPPLLHVGGECDHDYRSAECSHMNLAAPSPRVDQKALA GNLTEKVDTADGRTESHHCSTQERRPILSEEQDTEDTIEFDTKLSSSEGASSIERIKS VGKSRTNTISKDHLKNLVPFTEEWLAVMEAFGEEVLEQKTGAVQNSPTDKAAPEPSPW SPVKRKAQDVGPFDCTKYSKNVRTSD</aaseq>

Gene Sequence

<dnaseqindica>4120..4194#3810..3890#3415..3526#2108..3324#1512..1682#1202..1305#975..1088#731..872#396..652#162..329#1..34#atggcctcgccgtgccgcatccctgcagccaccggtcggtgagctccccctccccccccccccccccccccctgcatttgcacatactagggtttgccctggactttgattttccaggtatccaataagctttacttctctaataatatcttcatggacaggcaacaaagagaacaatatctcccaaaatcgacaccatgtcttggattgccaaaccccgtgcgaaggcaaaggcgcggctacctctaaaaagaggaagaacaagcctgcaggggggttcaatctcagaaaaagcatcgcatggaatcctgctttcttcactgaacaaggtacaagatttctttcacagctactaaatgcttccggcaactgaaaaacctctatgcttctggcaggcgttttggataacacggagctttctatgcttactggctcccaagtgaaggcaactaggagccctgcctctggattttcttctaccttttccccattgtctaggtttggaaaatctagcaatacatctgtgctcaaggaagtcggagagaattctcgtggaaaatttccttcaaaatgtttgagcgcagaaaacaagggaaggaagttgtttgcttcctcaaaagcttctgagcaggatgaacgaaaagcacccgcggtcagctcatcacatagcattttgcttacttatgattaaagctcatgcaatttctcgttctcttctggacaattgcagggcacacaggataaaaggtcagcaaaagctgtccaaaagtccattccacgaccacctgcaggatataaatatccttatggagattctgggattattggatatgtcttgtttttttttcttaacagaatcatgccattgcctggttaatactcttttcataagtttcactcttattaattactgtgctgttgttagtcttaacttaattatacaccaaaaaaagtgccaaactcaagtggtacagctcaaatacaaaggataccaaagaagtctgaaccttctccttctgtggtctctagaagtagaagtacctcatctgtgacaaatgttcccaaaccaacaacaaggccagctacaggtaatcttgctcatagtcctcaactctaccaatgaaatcttcctgacatataacttaggtttcagcacttttgcatgtcactataactaattcagcacgccactatttttcagttacaagtgagcgtacacataaagtagaggggctcccacttgaatcgaagactgagcgttcatctgtaattaaatcttctggacctaccatagggaagaacatggtgagtgatagcatcaattacatttaatcgaggggaaactcttagtacacctccgttatttgaagcactgccaattctatcgctgcgactttgttggataccactcaagatctcaaatcttgcccctatatatgatattgaatgaatttgaaaacatcataaccttaaaactacaaaggatgttacatgcttatttacttctacaggtgcctactgttactgccatctgccaagaaaccaatggttctgggaaatgtgaaactttttcaccatattcacaagataacccctccagttctgttgtcgcccctgcacgaatatctgctaagccatctgctctccggatgccttcaccttcagttggctttttcactcaggtgatctattatgctctttcatacatattcactaatgttgtttcttgttttctcagtgatatgaaaataacgtgatatttttgcagctactttgatgtaccaatatatttctcttgcacgttaagtgtttacttgcatctaaccagacgttacaaattaattacctgaaagcgcattaaaaaaataacggtgaatgatttgtatgtaataattgcatatgtgggttactggatgatgaggtggtgcgaaaattgtttgaaacaagagatggccatcctacaaaatgtatgtctgagttggtacaaaattttattctcattcttggagaaattttactttggccatcctacaaagtgtatgcctatgtttcatgagttttttttttgtgaaaatctcaatacctcatttttgactaattatttcagggaaaagcttctgtatcacatagtgacaatgctcaaagaaatccagaaaggtgctttagtggaaatatttcatcacttgtaaaaccccccaggtataaacagcctgtggatccaaaaagcagattccatctaacaaagcagctgccaaccaatttctctgctgcttccagtcttcctgtgcaacctgccactcgtgatcccaatgtcttggcctcttctctacctggtgttgaggatactaacgttcgttcactgaagcaatccttatcagaaagtactgtaccatactcagaaaaatcagggaatataaattatcaagaaatgccagatgatgatttttcgttggctggaaatggagctactacagagttgagttttagagataatgatggtggcagaaatatcatgcccaatgagtgcagtgttgcgctgtctgtcggacaggatcttaatgctatttgctgctcaagcattgagcctgctgaggattcttgctttcttaaagtcatttgctcctcgagcgaacctaccgtggggaggaacttgacaacatcttgcatttcttctccagggtgcaccccaaatgatctcaattctcaaagcaagtctgacaatggtgaaacagcagttgacatagaaaattcactttctggagagacatctggtacagtttgttcatcagaaggcaacaattgcacttcagctacagattccttgcgaaaatccgattcctgccatcagcagaatatgctagttcagtctgtacattgtacagatcaaatgccacagtttgatagttcaacaggcataaaaccatctctagcatacagccagttagactccaacacttctttgtgtagtgaagttcagcttacttcatcagaaggaccagatattgatagtgaaatggagcttgatacagatgatgcattcactgtggaggaacctcccctgttacatgtagggggtgaatgtgaccatgattacaggagtgcagaatgttcacatatgaacctggcagcgccttcacctcgtgtagatcaaaaggcactagctggcaatttgactgaaaaagtagatacagctgacggtagaacagaatcacatcactgttcgacccaggaaagacgacctattttatcagaagaacaagatactgaagatacaattgagtttgacaccaagttgtcgtcttcagagggtgcatcaagtatagagtatgtctgcatcgaatatttgaatatacaaagttagtcatctacaattatatattgcattgatagcgtgtcattcttatatttctgcaggaggattaagtcagtgggtaaatcaagaacaaataccataagtaaagatcatctaaaaaacttggtaccgtttacagaagaatggcttgctgtcatggaagcttttggagaggtcagtttacttgcatcatggacattttgagcttgtcagattgtaatttacatgagtaggttgtcgtgtgtcttacacaactgcttgtttttgttctatttgtatgggcccagtccagtgttcttaggagaggtcgagctcggtttatgcccctcaaataaattttatgatatgcaacatgaattgccacctaatcggcttacctgaagtttacctcgccgtacaagtttgattgagtcttctgctgtgaggcctatacctgagtttacgtatgttttggcaggaagttttggaacagaagacgggcgctgtgcaaaattctcctaccgacaaagctgctccagaacctagtccatggtcaccggtatgcctttctgaaatttagaagtttgggatgaaatttcttcaaacatatgtagagcgtttgccttattgtttcagtcagtcagtttatgcattacatgtagtaaacgaagatgcatcgctggttctttttgcgtaggatcagttgttgccattgatggtaacaaaagtgaagttaagtaggttgattgatgaagagccattccttgtgatggtgtgatctcgtgcaggttaaacggaaagctcaagatgttgggccattcgactgtaccaagtattccaagaacgtcagaacaagtgactga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0103100, RefSeq:Os11g0103100