BGIOSGA032440

From RiceWiki
Revision as of 04:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032440, complete gene.| tag = OS10G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032440, complete gene.

LocusTag

OS10G0116800

Ensembl Transcript ID

BGIOSGA032440-TA

Ensembl Protein ID

BGIOSGA032440-PA

Length

1840

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1022342..1024181

Sequence Coding Region

1022342..1022521,1022661..1022817,1023081..1023188,1023355..1023482,1023582..1023710
,1023797..1023864,1023944..1024181

Genome Context

<gbrowseImage1> name=IndicaChromosome10:1022342..1024181 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:1022342..1024181 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTTGCACTCGCGCTCTTGGCTGCCATGTCGGCGCTCTCGTCGTGCACAAGTCCGGCCACCGCCGAGCTCACACGGCTCGAGCACCCGGTGGTCGACGGCGCGCCGCTGCGCCTCCTCGTCGTCGGCGACTGGGGCCGGAAAGGCGGCTACAACCAGACAAGAGTTGCAGAACAGATGGGGAAGGTTGCGGAGGAGACGGAGATCGACTTCGTCGTGTCGACCGGAGACAACTTCTTGGAGAACGGCCTCGCCGGCGTCGACGACATGGCGTTCCATGACTCCTTCATGGATGTCTACACGGCGAAGAGCTTGCACAAGCCATGGTACCTTGTTCTTGGAAACCATGACTACAGGGGAAATGTGCTAGCACAGATTGACCCAGCTCTGAGGAAGATCGACAGCAGGTTCATCTGCATGAGATCCTTCATTGTCAGTGCAGGAATTGTCGATTTCTTCTTTGTCGACACGACCCCGTTTCAGCTCCAGTACTGGACTGATCCTGGAGAAGATCACTATGACTGGAGGGGAGTCGCGCCTCGGGATGCGTACATCGCCAATCTCCTCGAGGATGTTGATGCTGCAATGAAGAAATCAACTGCAACATGGAAGATAGCTGTAGGACATCATACCATGAGGAGTGTGAGTGCCCATGGAGACACCCAGGAGCTCCTTGAGCTTCTCCTTCCTGTCCTCAAGGAAAACGGTGTCGATTTCTACATCAATGGGCATGATCACTGCCTGGAGCACATCAGCAGCAGAAACAGTCCAATTCAGTACTTCACTAGTGGAGGCGGATCAAAGGCATGGAGAGGCATTTTTCAACAAAACGAAGACAAGCTCCAGTTCTTCTATGATGGACAAGGGTTCCTGTCACTTGAGCTCAGTGAGAACCGAGCTCGATTCGCCTTCTACGACGTTTTCGGTCAAGCTTTGTACCACTGGAGCTTCAGCAAACCTAATCTGCAGAAGGTTCAGTCCTCTGCTAGTGTAACTGAAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MAVALALLAAMSALSSCTSPATAELTRLEHPVVDGAPLRLLVVGDWGRKGGYNQTRVAEQMGKVAEETEIDFVVSTGDNFLENGLAGVDDMAFHDSFMDVYTAKSLHKPWYLVLGNHDYRGNVLAQIDPALRKIDSRFICMRSFIVSAGIVDFFFVDTTPFQLQYWTDPGEDHYDWRGVAPRDAYIANLLEDVDAAMKKSTATWKIAVGHHTMRSVSAHGDTQELLELLLPVLKENGVDFYINGHDHCLEHISSRNSPIQYFTSGGGSKAWRGIFQQNEDKLQFFYDGQGFLSLELSENRARFAFYDVFGQALYHWSFSKPNLQKVQSSASVTEE</aaseq>

Gene Sequence

<dnaseqindica>1..180#320..476#740..847#1014..1141#1241..1369#1456..1523#1603..1840#ATGGCTGTTGCACTCGCGCTCTTGGCTGCCATGTCGGCGCTCTCGTCGTGCACAAGTCCGGCCACCGCCGAGCTCACACGGCTCGAGCACCCGGTGGTCGACGGCGCGCCGCTGCGCCTCCTCGTCGTCGGCGACTGGGGCCGGAAAGGCGGCTACAACCAGACAAGAGTTGCAGAACAGGTGATTTTGCTTTCTTTGCATCAAACATTCATTCAACAATTCAATCAGAGAATGTTAATTTGTTGGCACCGATCAAAAGAAGAAAAGAGAACAAAACAACTGTATATCGATCAGAGAATGTTTGCTTGTGAGGAGTTAGATGGGGAAGGTTGCGGAGGAGACGGAGATCGACTTCGTCGTGTCGACCGGAGACAACTTCTTGGAGAACGGCCTCGCCGGCGTCGACGACATGGCGTTCCATGACTCCTTCATGGATGTCTACACGGCGAAGAGCTTGCACAAGCCATGGTACCTTGGTAATCACCATCTAAACCTAATTAATTTCCGTTTAATACTATTAGAACATATGGATTTATAAACTTATGTGTTTAGAGCTTATTTTTCTTTGACATGGTGTGTTTCTACAACTTTAGATGGATAAAACAAGTCAGAACAAAATAAATGATATTTACATTATTTTTTACAGAGAGGAATGGTCCAACGTCGCATTCAAAAGTCAATATCATTATGTATTTAAAAAGGGAGGGAGTACTAACTAAAGGTTATGAATTGTTTTCAGTTCTTGGAAACCATGACTACAGGGGAAATGTGCTAGCACAGATTGACCCAGCTCTGAGGAAGATCGACAGCAGGTTCATCTGCATGAGATCCTTCATTGTCAGTGCAGGTTGGTTAACACATCAAAACCCACAACAAACCTTGTTTCTTTTCTCAACATGCAGCAATTAAAATCTGTGTTCATAGCTAGAATCTTTGCAAATTTACAATGGAAATCTTTTCTGATTAATACTAGAATCCACTGAACAAATTTATAATGTCCTTTTTTCTGTAAGGAATTGTCGATTTCTTCTTTGTCGACACGACCCCGTTTCAGCTCCAGTACTGGACTGATCCTGGAGAAGATCACTATGACTGGAGGGGAGTCGCGCCTCGGGATGCGTACATCGCCAATCTCCTCGAGGTCAGTTCCTCTGATCAATATCCACTGCAAAAACAATCTGCTCGTTGCATCAGCAAAACTCTGTAATGAGATGACTGTCTATATGATTGTATCACCTAGGATGTTGATGCTGCAATGAAGAAATCAACTGCAACATGGAAGATAGCTGTAGGACATCATACCATGAGGAGTGTGAGTGCCCATGGAGACACCCAGGAGCTCCTTGAGCTTCTCCTTCCTGTCCTCAAGGTAACACTGATAAAAAGTAGTACTTTAATCTTCTACCAATTGGTTTCGCATATGAGCATTCGATGAAATTTACGATGATTTCACAGGAAAACGGTGTCGATTTCTACATCAATGGGCATGATCACTGCCTGGAGCACATCAGCAGCAGAAACAGGTGAGCACACTAATACCTTGTGACACAATAGAGGAAAGAAGGGTTCAAGAATCTTATGTTCTTCCTCCTCTCTTTTCAGTCCAATTCAGTACTTCACTAGTGGAGGCGGATCAAAGGCATGGAGAGGCATTTTTCAACAAAACGAAGACAAGCTCCAGTTCTTCTATGATGGACAAGGGTTCCTGTCACTTGAGCTCAGTGAGAACCGAGCTCGATTCGCCTTCTACGACGTTTTCGGTCAAGCTTTGTACCACTGGAGCTTCAGCAAACCTAATCTGCAGAAGGTTCAGTCCTCTGCTAGTGTAACTGAAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032440