BGIOSGA032504

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Revision as of 04:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032504| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032504, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA032504

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032504, complete gene.

LocusTag

OSJNBA0029P06.3

Ensembl Transcript ID

BGIOSGA032504-TA

Ensembl Protein ID

BGIOSGA032504-PA

Length

7479

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2181473..2188951

Sequence Coding Region

2181473..2182892,2188699..2188758,2188896..2188951

Genome Context

<gbrowseImage1> name=IndicaChromosome10:2181473..2188951 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:2181473..2188951 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGAGAGTGTTGTCTCTGTCGATGCTGTCGACGGCGAGCAGGAGCAGCAGCAGCGGCGGCAGCAGGAGGAGTTGCAGCTGGCTGACCTGCCCAACGACGCCTTGCGGAGCATCCTGCTCCGCCTTCCGTCGGAGCCGGGGTACTTGGCTGTCGCCGCCGCCGTCGCCAAGAACTGGCGCCGGCAGGTCCTCGGCAGCAACGGCAGCTTCCTCCTCGCCTTCCGCGCGGCGCACGGCGGAGTGCCTCCCCTCCTTGGCTTCTTCTGCAACAGGAGAAATCTGCCCTGTCCGTTCTTCACCAGCACGGTGGATGCCGGCGTGGTGGATCTGTCCCCACCGGCCGGGAAACAGCGGCCGTTCATCCACGACGTGCGCCATGGCCGCGTGCTACTCGACGACGGGGAGGACGGCCAGCTCCTGGTCTGGGACCCTCTCGCCCGCCGCAGGGATATCATCCCCACGCCCAGATGCTACTTCAACAACGATGACAGCTGCGGCGCTGCCATAATCTGCGGCTGCGATGGCCTGGAACACGTCGTCGGCGCCAGCGTCGGTGGTGGTGACTGCCATTTGGCGCCATACCGTGTCATCGTTGCATTCAATGACCGGCCCAACTATCGTTCGGACGAGTGGAACCATGAATGCATCTGCACTAGAGTCTGGATCTCGGAGACCAAAGAGTGGAGTGAGGTATACTCCATGAGAGGAAGTTGCGACTTTGATTTCATGCCGAGCGCCCTCGTCGCCGGTGCCATCCACTGGCTGGTGGGGGACACCAATAGTGTTCTTCAGTTCAATCTCATTACCAAAAAGCTTGCCTTGATTCAGACCCCATTGGACATCTCGGAATTCATGCTCTTTCCAACTAAGGATGGGAAGCTAGGCTTCACCGGTGTGCTGGGCTCTCACATTATCTTCTTCCACATGGACATTGCCGGTGATGCCCTCACCACTGTGAGGAACTGGAGTATTCAGAACGTTATTCAGGTGGACCACTTCTTGCCACCCTATATTAACATTCTTAGGACTCGTCGTTCTTTAGCTTCTCCATGGGTGGTGGACTATTACGTCTCTGACTCTGATGAAGGAGAAGAAGAACACGGTGTTGATGATGATGATGAGCCTAGGGAAATTCTACCAACAATGCAACATGACAATGAGGCTAGTGGCAGTCATTCCCCACAGTGGAGTGAGTCATGGTATGATGAAGATTTTGACCAAGAGAAGGACGCATTGATCCCAACAGTCAGCGAAAATGTAAATGTTATTGGTTTTGTCACTGAAGCAAATGCAGTTTTACTGTATGCAGCTGGTAGGGGGGTGTACACCATTGACGTCGAGACCAAACACACCCAAAGAGTGGCTGCTTGTGCCAACTATAGCCATGTTTTTCCCTACACCAGCTTCTACACTGCAGCTGGCAAAGTAGTACTCAGTGATCCAACACTCCATGATCAGTTGAACAGAAGCACGTCAGGAGGAGGAATTGATGCTGCAGATGATGATGGACAGCACACAGATGGTAAGTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAESVVSVDAVDGEQEQQQRRQQEELQLADLPNDALRSILLRLPSEPGYLAVAAAVAKNWRRQVLGSNGSFLLAFRAAHGGVPPLLGFFCNRRNLPCPFFTSTVDAGVVDLSPPAGKQRPFIHDVRHGRVLLDDGEDGQLLVWDPLARRRDIIPTPRCYFNNDDSCGAAIICGCDGLEHVVGASVGGGDCHLAPYRVIVAFNDRPNYRSDEWNHECICTRVWISETKEWSEVYSMRGSCDFDFMPSALVAGAIHWLVGDTNSVLQFNLITKKLALIQTPLDISEFMLFPTKDGKLGFTGVLGSHIIFFHMDIAGDALTTVRNWSIQNVIQVDHFLPPYINILRTRRSLASPWVVDYYVSDSDEGEEEHGVDDDDEPREILPTMQHDNEASGSHSPQWSESWYDEDFDQEKDALIPTVSENVNVIGFVTEANAVLLYAAGRGVYTIDVETKHTQRVAACANYSHVFPYTSFYTAAGKVVLSDPTLHDQLNRSTSGGGIDAADDDGQHTDGKW</aaseq>

Gene Sequence

<dnaseqindica>1..1420#7227..7286#7424..7479#ATGGCCGAGAGTGTTGTCTCTGTCGATGCTGTCGACGGCGAGCAGGAGCAGCAGCAGCGGCGGCAGCAGGAGGAGTTGCAGCTGGCTGACCTGCCCAACGACGCCTTGCGGAGCATCCTGCTCCGCCTTCCGTCGGAGCCGGGGTACTTGGCTGTCGCCGCCGCCGTCGCCAAGAACTGGCGCCGGCAGGTCCTCGGCAGCAACGGCAGCTTCCTCCTCGCCTTCCGCGCGGCGCACGGCGGAGTGCCTCCCCTCCTTGGCTTCTTCTGCAACAGGAGAAATCTGCCCTGTCCGTTCTTCACCAGCACGGTGGATGCCGGCGTGGTGGATCTGTCCCCACCGGCCGGGAAACAGCGGCCGTTCATCCACGACGTGCGCCATGGCCGCGTGCTACTCGACGACGGGGAGGACGGCCAGCTCCTGGTCTGGGACCCTCTCGCCCGCCGCAGGGATATCATCCCCACGCCCAGATGCTACTTCAACAACGATGACAGCTGCGGCGCTGCCATAATCTGCGGCTGCGATGGCCTGGAACACGTCGTCGGCGCCAGCGTCGGTGGTGGTGACTGCCATTTGGCGCCATACCGTGTCATCGTTGCATTCAATGACCGGCCCAACTATCGTTCGGACGAGTGGAACCATGAATGCATCTGCACTAGAGTCTGGATCTCGGAGACCAAAGAGTGGAGTGAGGTATACTCCATGAGAGGAAGTTGCGACTTTGATTTCATGCCGAGCGCCCTCGTCGCCGGTGCCATCCACTGGCTGGTGGGGGACACCAATAGTGTTCTTCAGTTCAATCTCATTACCAAAAAGCTTGCCTTGATTCAGACCCCATTGGACATCTCGGAATTCATGCTCTTTCCAACTAAGGATGGGAAGCTAGGCTTCACCGGTGTGCTGGGCTCTCACATTATCTTCTTCCACATGGACATTGCCGGTGATGCCCTCACCACTGTGAGGAACTGGAGTATTCAGAACGTTATTCAGGTGGACCACTTCTTGCCACCCTATATTAACATTCTTAGGACTCGTCGTTCTTTAGCTTCTCCATGGGTGGTGGACTATTACGTCTCTGACTCTGATGAAGGAGAAGAAGAACACGGTGTTGATGATGATGATGAGCCTAGGGAAATTCTACCAACAATGCAACATGACAATGAGGCTAGTGGCAGTCATTCCCCACAGTGGAGTGAGTCATGGTATGATGAAGATTTTGACCAAGAGAAGGACGCATTGATCCCAACAGTCAGCGAAAATGTAAATGTTATTGGTTTTGTCACTGAAGCAAATGCAGTTTTACTGTATGCAGCTGGTAGGGGGGTGTACACCATTGACGTCGAGACCAAACACACCCAAAGAGTGGCTGCTTGTGCCAACTATAGCCATGTTTTTCCCTACACCAGCTTCTACACTGCAGGTATACTATATACGTAAGCTAGAAAGCATGTTTGTTATGGTTAGGAACCGCAAGATTTTCTTATTTTAACTAGCTAGGCAGGATAGTATTATCACTTTCAGTAAGTAAAATAAAGCACATAGTAATTAACTTCAAGTTATAGTTTCTATCATATTTGTTTATTCTCTATTTGGGGAGATTTACCAGGGAAAATATGTAGTGAAAACCACATATGTAGTGGAAACTTGAAAACTAACGTTAGATCGAGAAATGGACGTCCGAGATTCGTCCACGTCACCATGAGTTAAAATTTAACTCGCAGATTCATTCCTGAGTTAAACTTTTACTGGGAGTTAAATTTTAACTCATGGTGACGTGGGCGAATCTCGAACGTTCGTTTCTGGATCCAACGGTAGTTTCCAAGTTTCCACTACATATGTGTTTTGCACTACATATTTTCCTGATTTACCAAGCTAGTTTAATTATTTGTTTTCTTATAGGTTAGAATACATAGTGTTTTTTAAAGTATACCATTGAAACATGTTATATGTATTCTCAAGCATGTTGGGCTATCTACGTTGTCACTGTTTCTAATATGCAAAACATGCCTAGACAAAACTAAGAATTTAATGTAATAATGGTTTTACATGCTGTAATGTTATGTCTTGACTTTGATGATAGACATCAATCTTTCACAGCTCTATATTTATCACTTGTACACTCTCAGATATACAGATATTCTGCAGTTTTTTATTCCATCAAGTTTTGTGGACCCCCGTTTTTATAACAGGAATCAATCGTGTAAACAGTACCATTTCCCTGGATCAAGTAGTCTGGTACACACGAGTTCATGCTGAAATATCAAATGCACATACATGAGAGTCTAGTGCGAATTATTACATCATAAGCCCGCAGGCATAGTCTTAGATCATCGGACCGAGCGGTCCGGAATACATTCCAAAAGCAGAAGTAGATAAGGCAGCGGAGTTAAGGCAGCGGCACGCCATTGCCACAGGCAATGACCGTAACTAAGACCTACTGAGCGCCATCGTCTTCATCACCCTCTTGGTAATAGGCATAGGGATCCTCCGAAGCTTCATCTCCGGCCTCTGATTAAGTTTATATATTGCAAGGGTGAGTACCAACAGTACTCAGCAAGCCACCACAGCAACAATGCACATGATAGGGGTATTCAAAGGATGGCTATGGTTCTTTTACGTAAAGCAAGTTTTGTAATTCTTTTCACAAGCCTAAGACCTAACATAGACTAATCAAATTTTAGTACTAGTGTTCACATTAAACAACGACGGTTCTGTCTACCATCCATTGTGATCCCAAGGATAGCTTTCCGCCATTGAGTCGTCATGGTTTTCTGAGGATGTCCATCTTCCCGCCTCTTAGGAAGTGGCTCCAACAACATAAAATCATCATGCAATATCCTATCCTACACAAGTTAAGAATTTTGAGTCTAGCCAAGTGTAATACATGTCCCGGTGCTCAATAACCGCGAGCACGGCTATTCAAATAGATTTGGTTTACTCACACTGCAGTGAATATACACTTTACCCGCACTCCGCAACTGCCCAACACATGAGCCTCGTCCCAGCACATGAGACGCGTCATGGCAAAGCTTTTTGATAACCTCGCATTGGCAGTACCTGCTCCATGAACTTTACATCCTCATGTACTCTAGGTGTACACGGTTTCTAGCAGTGAGAGGAGTTCTGGCGCACCCGAGAGGGAAAGACTCACACATGCATTAAGTTATAATTATGTTTAGATTCTCACATGGCAGTCCTACCGATGGCGACACCACTGTAGACACCCGCCTCGCGGTCCTACCAATGGCTGCCCCACCATAGATCCCCTGCCTCACACATCGAGAAACCACTATGCATGGATACTGCCTCCGTTCAGCTATCTACTCCGTTAGGTCTATACCCATACGAGAAGTGCGGTTGTACGGGGGTCGTTTCATGCTTAACTTCATGGCTCGGTCCTTAATTGACCGGGGACGGCATAAGCCTTTTCCGGACACCACCCAAATTCTCCGTCCGCCCCAGTTGAAAACAGTTGTTTAATTTTATTTCTCCTTTCACAAATCATGTCATCAACATCATGGCAATGTGGCGCTCATGTCTCCACATGCCGCATCCCAATTACCTTCCCAAAGGTAATTGCCCAAGCATATAACATTTGATAAATATGAGTATGCATGATTCTAAAATAGCATTTCTAAGCAATTGTCATAATTGACTAGAGACTCATACGTAAACATGGTTACGAAGGCATAAGGGTAAACAATAATCAAGGCATGGCATAATCACAAGTAGGATGTTCATCATTGCATGCAATTTTATTTGTAAACAAAATAATTTCGCAATTGGGATCAACATGTTCAAAGAATAGTGATGACTTGCCTTGCTCGTAGTCCTGCGGGTCTTGACCCTCGCTCGGATCCGCAACTCCCTCGGGTTCTAAAATTACGTGCGAGGAAATGATTTGAATTCAATTAGAATTCAATTAAAATCTAAATAACTCAAAAAGTCGAACGTGAATCGATCTTTCTATATTGACTACAAAGTTTGCGAAACCACTTTATTCGAATTGTTGGATCTTTTAACCTAAGTCATTTTGTTATTTAGAAGTACATTCCTAAGAATTCAACATAATTAGTTAGCTCTTAATAAATCTAAACTCCTACCGCGAATTGATTACTTATAGAGATTACCAAAAATAATCTATAATTATATTAAATTTTGCACTTCTACGACTATAATTAATCTATAATTAAATTCTAATTATTTTAAATTTTCTAAACCTCCTTATTCTCTCTCTAATTTTCTATTTATTTTCCCTTTTCTTTTCCTCTCCTTTTTTTCTCTCTTCTTTCTTTCTCCTTTTCCTCTCTTTCTTTTCTTTCTTTTTCCTCTCTTCTTTTCTCTCTCTCTCTCCCTCCCGGCTTCTTTCTTCCTCCCTCTCTCTCTCGGCTCATGCTCCCCGGAGGCGACGGCGGCAGAACGAGGGAAGGGGCGGCGGATTACCGATGGCGGCGGCGCAAGGCGGGCGACGCACGGTGCGGCACTCGGCGCGGCGTGGCGGCTTCGAGGCGACGGCACGGCGGCTTCGAGGTGACGGCGCGGCGGCACGAAGGCGGCGGCGCGTGGAGAAGGAATGCGGGATGGAGGGGGATGGGTGTAGAGTGGAGAAGGGAAGGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGACTAAATACAGTGGCCTTCTGCTCCACAACCACCACCACGTCGACACCTCTTTACCAGCACCTCACCTCTGCACACCGTCATCTCGCAAACGACCCACCGTAGCCTTGTTGATGTACCAGTCACCAGGGCTAGATCGGACCCCTAAGCATCTACACTTGTCCCTTGCGATGGCCTGGAACACGTCGTCGGCGCCAGCGTCGGTGGTGGTGACTGCCATTTGGCGCCGTACCGTGTCATCGTTGCATTCAATGACCGGCCCAACTATCGTTCGGACGAGTGGAACCATGAATGCATCTGCACTAGAGTCTGGATCTCGGAGACCAAAGAGTGGAGTGAGGTATACTCCATGAGAGGAAGTTGCGACTTTGATTTCATGCCGAGCGCCCTCGTCGCCGGTGCCATCCACTGGCTGGTGAGGGACACCAATAGTGTTCTTCAGTTCAATCTCATTACCAAAAAGCTTGCCTTGATTCAGACCCCATTGGACATCTCGGAATTCATGCTTTTTCCAACTAAGGATGGGAAGCTAGGCTTCACCGGTGTGCTGGGCTCTCACATTATCTTCTTCCACATGGACATTGCCGGTGATGCCCTCACCACTGTGAGGACCTGGAGTATTCAGAACGTTATTCAGGTGGACCACTTCTTGCCACCCTATATTAACATTCTTAGGACTCGTCGTTCTTTAGCTTCTCCATGGGTGGTGGACTTTTANNCGTCTCTGACTTTGATGAAGGAGAAGAACAACACGGTGTTGATGATGATGATGAGCCTAGGGAAATTCTACCAACAATGCAACATGACAATGAGGCTAGTGGCAGTCATTCCCCACAGTGGAGTGAGTCATGGTATGATGAAGATTTTGACCAAGAGAAGGACGCATTGATCCCAACAGTCAGCGAAATGTAAATGTTATTGGTTTTGTCACTGAAGCAAATGCAGTTTTACTGTATGCAGCTGGTGGGGGGTGTACACCATTGACGTCGAGACCTAACACACCCAAAGAGTGGCTGCTTGTGCCAACTATAGCCATGTTTTTCCCTACACCAGCTTCTACACTGCAGGTATACCATATACATAAGCTAGAAAGCATGTTTGTTATGGTTAGGAACCGCAAGATTTTCTTATTTTAACTAGCTAGGCAGGATAGTATTATCACTTTCAGTAAGTAAAATAAAGCACATAGTAATTAACTTCAAGTTATAGTTTCTATCATATTTGTTTATTCTCTATTTGGGGAGATTTACCAGGGAAAATATGTAGTGAAAACCACATATGTAGTAGAAACTTGAAAACTACCGTTAGATCGAGAAATGGACGTCTGAGATTCGTCCACGTCACCATGAGTTAAAATTTAACTCGCAGATTCACTCCTGAGTTAAACTTTTACTGGGAGTTAAATTTTAACTCATGGTGACGTGGGCGAATCTCGAACGTTCGTTTCTGGATCCAACGGTAGTTTCCAAGTTTCCACTACATATGTGGTTTGCACTACATATTTTCCTGATTTACCAAGCTAGTTTAATTATTTGTTTTCTTATAGGTTAGAATACATAGTGTTTTTTTAAAGTATACCATTGAAACATGTTATATGTATTCTCAAGCATGTTGGGCTATCTATGTTGTCACTGTTTCTAATATGCAAAACATGCCTAGACAAAACTAAGAATTTAATGTAATAATGGTTTTACATGCTGTAATGTTATGTCTTGAATTTGATGATAGACATCAATCTTTCACAGCTCTATATTTATCACTTGTACACTCTCAGATATACAGATATTCTGCAGTTTTTTATTCCATCAAGTTTTGTGGACCCCCGTTTTTATAACAGGAATCAATCGTTTAAACAGTACCATTTCCCTGGATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGGCGGCAGGCGGCGATGGCGACGGCTCGGGGCGCGAGGCGCGTGCGGCAGAGGACGAGGCAGGGCTAGGGATGCTCTCGAACACCTAGCGCGCAGTGAATAGTGCCAGATTCCAATTAACCCTATTTTAGCCTATTTCCTATATAAATTTTATTCTATAAATCCTAATTTTTGCATAAATGAAGTTTACTCAGTATTTGTGTTATTCTAACTAATAGATTCACCCTAGATTAATATTACCCATATTATATTTCTATATAATTTATTTGAATCCTTAATTAGGGCTAACTCTTATTCCAACGCACTTAAATTTAATTGATACTAATATGGTCGCGATAATATTTTTATTTATTTCTATCCTCACCTAATCTTTATTTTAAATTGTATTCCAATTATTTATTTAGCCAAATTAATTTTAGGGTTTATTCCTAATTAGTTATTCTTTTATTCGCGATTAATGAACTCCGAAATGAAAATCCAATGAAATAGGCGAATAAAACCGGCATGATGCAATTTATTTAAAAAGTTTTTGAAGATCCGTATTTTTAGAGTTTTGATTTTGTTGGTCGCATTTTCAGGGTGTTACAAGTTTTACCCGTAATGATTATCGTTAACAATTAATTGCAGCTGGCAAAGTAGTACTCAGTGATCCAACACTCCATGATCAGTTGAACAGAAGCACGTCAGGTTAAAAACTCTTACAGTCATTTAATTTACTTATTGTAATATTCGTATTCAATTAGATTCATACAAAATTAATTGGTATCATCTCTTCTAATGTTTCTTTGAATTTTTGTTCGCTGATCTTGTTATTTCTTGCACAGGAGGAGGAATTGATGCTGCAGATGATGATGGACAGCACACAGATGGTAAGTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032504