BGIOSGA032629

From RiceWiki
Revision as of 04:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032629| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032629, complete gene.| tag = OsI_329...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032629

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032629, complete gene.

LocusTag

OsI_32932

Ensembl Transcript ID

BGIOSGA032629-TA

Ensembl Protein ID

BGIOSGA032629-PA

Length

4229

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5093099..5097327

Sequence Coding Region

5093099..5093156,5094886..5094993,5095250..5095493,5096687..5096930,5097016..5097327

Genome Context

<gbrowseImage1> name=IndicaChromosome10:5093099..5097327 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:5093099..5097327 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGTCGGCGCAAGGCCGCGAGGCAGCAGCCGATAGGCAGGTGGACAGCGGAGCGGCCGGTGATGATTGGATCCATTGTTGCTGCAGTCGTTTTTGTGGTCCTCGTTTCAGTTGTTGTTTGGCTTTGCGTCAGGCATAGAGCCATCAAGAAGGTTGCACTGGCTGGTCCAAGATCATACTCCTACGAGGAATTGTACACTGCAACAAATGGTTTTTCAGATGAACGAAAGTTGGGCCAGGGTGCGTTTGGTGCTGTGTACCGGGGAGTCCTGTCAGATCCATCTCAGACTCTTGTGGCCGTCAAGAAAATTCAGAGGATGTCTGAAGCAGCGTGGCAGGAATTCGTGGCAGTGATAACCATTGTTACCCAGCTTAAGCATCGGAATATCGTGGACCTGATGGGCTGGTACAATATAATACTCGACATGGCGAATGGTCTCCAGTACCTGCACACCGCGCGTAACGAATGTGTCCTGCATCGCGACATCAAGCCAAGCAACGTGATGCTCGACGAGAACCTCAGCTGCGCGAAGCTGTGCGACTTTGGGCTGGTGAAACAAATCAACCATGACGAAGTGACCCCGGGCCGGCAGACAACCGTGATTGGTACACGGAGCTATCTCGACCCGGAATGCATCAGGACGTCGATACATGGCCACAACAACAAGAACAGCCTCGTCGAGTGGGTACAGGACTCGTTCCGCCACAGGAAATCAGTCACCGATATGGCAGACGAGAGGCTGAAGGGTGATTTCGATGAGGAGCAGATTGAGCGGGTGATCCGGGTTGGGTTCCTGTGTGTGCTTCCGGAGCCTGACAAGCGGCCGGACATGGCGACGGTGGTGGACTACCTGAAAGGAAGGAGCGATGTGCCTGCAGCAGAGCCATATCCTGCAAGTCCAGCTAGCATTCATGCTGCTAACAAGTATGAATCGTCACCGGCCTCTCTGCTCGTTAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MARRRKAARQQPIGRWTAERPVMIGSIVAAVVFVVLVSVVVWLCVRHRAIKKVALAGPRSYSYEELYTATNGFSDERKLGQGAFGAVYRGVLSDPSQTLVAVKKIQRMSEAAWQEFVAVITIVTQLKHRNIVDLMGWYNIILDMANGLQYLHTARNECVLHRDIKPSNVMLDENLSCAKLCDFGLVKQINHDEVTPGRQTTVIGTRSYLDPECIRTSIHGHNNKNSLVEWVQDSFRHRKSVTDMADERLKGDFDEEQIERVIRVGFLCVLPEPDKRPDMATVVDYLKGRSDVPAAEPYPASPASIHAANKYESSPASLLVS</aaseq>

Gene Sequence

<dnaseqindica>1..58#1788..1895#2152..2395#3589..3832#3918..4229#ATGGCGCGTCGGCGCAAGGCCGCGAGGCAGCAGCCGATAGGCAGGTGGACAGCGGAGCGTCAGTGCGGCTGCGCGAGCCGCGAGTAGCAGGCCGGCGGCAGCGTGGCACTTCGGGAGCACGTGAGTAGGAGCAGCAGTGCACCAGGAGTCCGTAAAAAATAGAATATGATATAGTGATAGTAGAAAAAGATTAAAAAAAGGAGCAATGATATAAAGATTAGAAATATATGAAATTCATCATTTCCATTGTGAAGAATAAAGTAGAGACCAAATTTATAAATAATGAATGGCTTATGCATACTCACTACACGTATGCACGTCACATCCTAATCAACATCACTTCGTAAAATTAACATTACCAAGTTATTTTGGTCCTCGTTCGCACGAACTAGAAAGGTTCGTGTACTAAAATGAGCATTTTACAAGTTTATGTACTAATTAAATTACACCCACCTAACAAGTTTGTGTACCACCAATGTAATTTACTCTTTTACTTAATTTCAGCTCTTTTTTTCTTTATGTGCTTACTATATCCTACTTATGTAAACATGTTTCCATCTTGCCAAGCCCCTCTTCCAACTTGTGAATTAATTACTTTTAATCTTTATACAGTGTGTATTACAAACTTACATTGTAATTATTAAAATTACAATGTAATTTTTTCAAGTTACAGTGAGCACCGTAAATACAGTCCCAAAACTAATGCTAGGAAGGATGTCTATCTCTCGTACGTCCTAAGATCTGGGCAAAATAACTTGAGTCAACAAGCTTTTTTTTTATTCAAACCTTGCAGTTATTGCTTTTTTAATTGAACTTTCAAGCTAATTAAAACGAGGTAATTTTTCATCTAGTTCTTATACAACATATTCTATTAAAATTCTAATAATTAATGACAATAGTTCAAGCTGCACAACCATAAATAAATACAAAATTCCCTACATGCCCCCAAAAATTTCATGCTATCGCTTCTACACCCCGAGATATGCTTGATCTTATGTACCCCAGATTTCTTGTTTTAATCCTTTACATGTCCATTCCAGTAATTGACCAAGAGTTGACCACTTGTTTCATTAAAATGATTAAAAGTGAGAAATTTTTTAAGTGGGAATTGTTTGAGTTATGGAAAATAGTAAGGGGCAAATCACCGAAATCATTTATATTTCAAAATTTTGTGGAACTTTGCATCAAATTTGAAAATTAACTTTTGAATGAGTATTCGGTTTGAAAAATGTGAATTTTGACAATCATGTATTCACCTTCGATTACTATTATCATCTGATGCAAAATTTGTCAACTTTTTTTGAATACTTAAACACCACTTTTTAAATTCATTAAAAGTTTCAAAAAAAATAGTCAATGTATATTTCATACACTAATAATTTTTACCGTTCAACATCTGTCACTGTGTGGTATAACCTCGGAGCAATAAGGATGTTTTATGAATATTTAATGTTCCATTGACGACAACTGATAATCAATATGGTATCAGAATAATAGTTTTTGAGTTTGAATCTTGGCTGGCACACAACTAAAAAAAATTACATCCCATTTTTATTCCATGCAAGAGGCCAGCTAAGGGAGGCTCCGTGTGATTGGAAGTGTTTGTTGTTTTCTTATCAGCTTGAGATTTTTGTCAAATATGGTTGATGCATGTAACATAATACTATATGTACATTCTGTTAAATTTCAATTTATGACAATAATTCATGTTGCACCCACACAAAGTATTTCATTATTCCTGACCTCTGGATAAGATTTGGAATTTTAATGTACTGTTTTAATTACAGGGCCGGTGATGATTGGATCCATTGTTGCTGCAGTCGTTTTTGTGGTCCTCGTTTCAGTTGTTGTTTGGCTTTGCGTCAGGCATAGAGCCATCAAGAAGGTTGCACTGGGTATGTACAGTTCTTATCGTTCTACCGAACTAGCACATATAGACTACAGATATACTCGTTATACTACAGATAAAAAACACAAGCTGGAAACAGGGGACGGCCCCCTCCAACAATTTTTTCCACAGATAATCATTTAACTAACTAGATAATTAACTTAAGTAATAGTGTATTAGGCCCCTTTCCAAACACCCTTGGGGCCATTGCCTGGAAACATAGAATGGTCACACGATATATATGATGCATCGATTTGTTGCAGCTGGTCCAAGATCATACTCCTACGAGGAATTGTACACTGCAACAAATGGTTTTTCAGATGAACGAAAGTTGGGCCAGGGTGCGTTTGGTGCTGTGTACCGGGGAGTCCTGTCAGATCCATCTCAGACTCTTGTGGCCGTCAAGAAAATTCAGAGGATGTCTGAAGCAGCGTGGCAGGAATTCGTGGCAGTGATAACCATTGTTACCCAGCTTAAGCATCGGAATATCGTGGACCTGATGGGCTGGTGCGACGACCGTAACAATCTTTGCTTGTCTACGAACTGATGGACCGTAACCTTGATTACCACCTTTACCCTCCACAACGCATGGGGGAAAGTGAAGTTGTGCTAGATTGGAAGAAAATTAAAGGTAATGAAGATCATAGATGCCCTATCTCGGCTGCTAAGGAATTATTTTAATTAAGCCTTTTTAAGTTAGTAGAATTCATTCCAGCCTTTGCTTTAAATAAGAAATAACCAATTATTAAAGATAGTGCAGAATAAAGGACTGCTCGCTACAAAATCACATATTTTACTTAAAAAAAGGAAAATTGCTTAGAATAGCACCAATGGATAGAGGTTTTCGATCTACAGCGAGATTATTGTCTTAATTACTCCCATCATTTCCGTTTATTTGTGACCATTTTTCTCCAGCTTAACTATAACAAACATGTACTTTAATCACAGTAGATCTGTAGGACAATATATAGAACTTTAGTTTAATTAATTCTAGATGGCAAACCAAGCACTTATTTAATTCTAGAAGTGATTGATGGGTTGGAGTGGTGGGCATGCTTAGTTCGATTAATATGAACCGATGTTTGTTTTAAAATATATGAGAGAAAAATTAAAAACTGTTTTTTGAGTTAAAAATAGAGTGAGCAATAAGAACAATATATCAAACTATCGTCACTATAAGTTCTATAGTAATATCCTGTTGGCATACATCAGCATGAAACAAGATATTAGGGATATTCTTACCTGCTTCCTCTCTTCAAGTGTAATGCTAAGGATTTAACAATTTTAGAATGTGTACCCTGGCGCACCATGAATAGGACCGTCTATCTCACACTATAAAGGGTTAACCAAACCCATAATTTTTTATGTTATACCATCACAACACAAAAAACTAACTTGATAGGTGACGACCATGCATTTCACAATTGTTGGGCATAGTGTCCTCAAGGAGAACTATGGATAACGTTATTGTTCTCCTCATGGTTTGCTATCACAAAACCACCTGAATTCGTAACATCCCATTCCAGCTGGTACTTCCGTGACGGCGGCTATCAGGGTTAAGTAGTCATATGCCTAATTCATATATTTTTTGGAACCTGTTAGAAGTAGTCATATGCTTAATCCAGTTTTTTTTTTTTTTTTTTTTTTTGGAACCGCTTTCTTGCTTAGTAAACATATGCTGTATATTTGGTATGTCACAGGTACAATATAATACTCGACATGGCGAATGGTCTCCAGTACCTGCACACCGCGCGTAACGAATGTGTCCTGCATCGCGACATCAAGCCAAGCAACGTGATGCTCGACGAGAACCTCAGCTGCGCGAAGCTGTGCGACTTTGGGCTGGTGAAACAAATCAACCATGACGAAGTGACCCCGGGCCGGCAGACAACCGTGATTGGTACACGGAGCTATCTCGACCCGGAATGCATCAGGACGTCGATAGTAAGCGCGGCTTCAGACGTCTACAGCTTCGGTTTGGTCCTGCTCGAGATCGCGTGTGGCCGGCAGCCGACCATGCTAGCTGCAGCATGGCCACAACAACAAGAACAGCCTCGTCGAGTGGGTACAGGACTCGTTCCGCCACAGGAAATCAGTCACCGATATGGCAGACGAGAGGCTGAAGGGTGATTTCGATGAGGAGCAGATTGAGCGGGTGATCCGGGTTGGGTTCCTGTGTGTGCTTCCGGAGCCTGACAAGCGGCCGGACATGGCGACGGTGGTGGACTACCTGAAAGGAAGGAGCGATGTGCCTGCAGCAGAGCCATATCCTGCAAGTCCAGCTAGCATTCATGCTGCTAACAAGTATGAATCGTCACCGGCCTCTCTGCTCGTTAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032629