Os11g0107400

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Revision as of 08:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0107400| Description = Nodulin-like domain containing protein| Version = NM_001072076.1 GI:115483764 GeneID:4349562| Length = 4421 bp| Def...")
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Gene Name

Os11g0107400

Description

Nodulin-like domain containing protein

Version

NM_001072076.1 GI:115483764 GeneID:4349562

Length

4421 bp

Definition

Oryza sativa Japonica Group Os11g0107400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:340402..344822

Sequence Coding Region

340486..340854,343100..343974,344065..344575

Expression

GEO Profiles:Os11g0107400

Genome Context

<gbrowseImage1> name=NC_008404:340402..344822 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:340402..344822 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggtcgacgacgacgacgacggagcagcagcagcagcagcagcaggggcggaggagaggcgcaggatggcggcgttgggcggtgctggtggcgacggtgtggatacaggcggtgacggggacaaacttcgacttctcggcctactcgtcggcgctcaaggcgtccctgggtgtctcgcaggaggcgctcaactacctggccaccgcctccgacctgggcaaggcgctgggctggtcgtcgggcctcgccctcatccacctccccctccccgccgtcctcctcctctccgccgcctccggcctcgccgcatacgccctccagtacgccctcatcctcgactacctccacctcccctacccgctcgtgttcttgatctgcctggtagcaggttgcagtatctgctggttcaacacagtatgctttgtgctctgcattcgcagtttctcctcgagcaatcgcccactggccctctccctctccataagcttcaatgggctaagtgctgcattctacaccctctttgccaatgccctctcccccttttccccatctgtctacctccttctcaatgccattgtccctctcgtcgtatctcttgttgcactgccagcaatactcctctgccacccacatgacggccacctccacgttgtgcccaagcatgacaaacgtatctttcttggtctctacctcctcgcgttcatcactggcatatatctagtgatcttcggctctttcaacacaaccaactccactgcatgggtggtccttacaggtgccatggtcctcctcgccctccctctcatcatccctgcctcctccagttgttctcatgtggacacacatgaccctgaacctactgttcaactcaaccacgaagattcaagaaaaccacttttgctcaatagtgaccacagcacagagtccaatgccatgatgcagaaaacagtggaacacccaatgcaggattgttgcttgggaacagtactggagaagggacgcatgttggttctttgtgaggagcatagtgcaaagaagcttatccagtgcgtcgacttctggctatactacatagcctacttctgtggtgccactgttgggctagtgtacagcaacaacttggggcagattgcacaatcatttcaccgggaatctcagctcaccatgcttcttgccgtctactcctcctgttccttctttggtcgccttctctctgcacttccagacttccttcgcaggaaggtttcgtttgctcggacagggtggcttgcagctgcgttggttcccatgccaatggcgttcttcctaatgtggaaattgcatgatgtaaacactctggtagcaggaacagcactaattggtctaagctcaggcttcatctttgctgcagcagtgtcagtgacctctgagctctttggaccaaacagcattggcatgaaccataacatcctcatcaccaacatccctcttggatcacttctctacggtcagattgctgccctagtgtatgatgcaaatggcctaaagatgtcagtaatagacaaccgcaatggcatggttgacactatggtggtttgcatggggccaaagtgctactcaaccacattctttgtgtggggttgtatcacattcctggggttggtgtcaagcataatcctattcttgagaacaagaacagcttacagtgctgctggtggtcagcaagttgtaaacaccttagcgaagtttcgacttgacagaactccttga</cdnaseq>

Protein Sequence

<aaseq>MERSTTTTTEQQQQQQQGRRRGAGWRRWAVLVATVWIQAVTGTN FDFSAYSSALKASLGVSQEALNYLATASDLGKALGWSSGLALIHLPLPAVLLLSAASG LAAYALQYALILDYLHLPYPLVFLICLVAGCSICWFNTVCFVLCIRSFSSSNRPLALS LSISFNGLSAAFYTLFANALSPFSPSVYLLLNAIVPLVVSLVALPAILLCHPHDGHLH VVPKHDKRIFLGLYLLAFITGIYLVIFGSFNTTNSTAWVVLTGAMVLLALPLIIPASS SCSHVDTHDPEPTVQLNHEDSRKPLLLNSDHSTESNAMMQKTVEHPMQDCCLGTVLEK GRMLVLCEEHSAKKLIQCVDFWLYYIAYFCGATVGLVYSNNLGQIAQSFHRESQLTML LAVYSSCSFFGRLLSALPDFLRRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVA GTALIGLSSGFIFAAAVSVTSELFGPNSIGMNHNILITNIPLGSLLYGQIAALVYDAN GLKMSVIDNRNGMVDTMVVCMGPKCYSTTFFVWGCITFLGLVSSIILFLRTRTAYSAA GGQQVVNTLAKFRLDRTP</aaseq>

Gene Sequence

<dnaseqindica>85..453#2699..3573#3664..4174#agccggccggaggaggaattaagcaacaagctaagctaagctagccagaggaaacaacaaggaaaaggagagatcgatcgagcgatggagcggtcgacgacgacgacgacggagcagcagcagcagcagcagcaggggcggaggagaggcgcaggatggcggcgttgggcggtgctggtggcgacggtgtggatacaggcggtgacggggacaaacttcgacttctcggcctactcgtcggcgctcaaggcgtccctgggtgtctcgcaggaggcgctcaactacctggccaccgcctccgacctgggcaaggcgctgggctggtcgtcgggcctcgccctcatccacctccccctccccgccgtcctcctcctctccgccgcctccggcctcgccgcatacgccctccagtacgccctcatcctcgactacctccacctcccctacccgctcgtacgtacacacttcgtcttctctctctctcttttttttttcttttctttattatcgatcgcctattcgctttgttttaattaagcttgattattcaattagctttctagttacgagtacctataaggtgtccttccatcatgattatatacaagaaatataatggagatcttagccaactatgctgattgatcgtagtagtacgtggatgtatagaggccaaggccggccagcagggtttggagattcgagatcgatagtactagtagtagtagtaatgaagctactgatctgagtggccacaaataagttgcaatcatatatcacatttacggacgcaattctaacgtcccattcaactgctactgaattatatgtatattaaatcgatatctgagagactcaatgcatccatatctctccgtcgccgcgcccacctctcgtttttccttggcttacaattttttggaatcgtctgctgcaatcgattaccatttaccaatatactcctactgtgtattataatattgcccatgttatacatagtcaatcttatatactgtgtatctgcagcaataagttagtttctgccttaaacatgtatctggattaattgattacttcaatcaactcaacgtatattttgggatggagggaataacaaacaactcctaaccaacaacacccgcatatgccatcatcaaccacgatcaaaagtgtttatttaattgattctttctcatctcccttttaattttcataaatgttagctgcttgcgcctatttcaaaagatgaagagccaaaaataaaaatcccacacacgatcgaagaagaaacaaacaaatggttctcaagtctcagcttaaaatggtccagaaaagtataaatagctaaaactccatcggtaagttcacgcttcactcatgaaaaactcacgaacaaactaacgctacggcactatgtaaaactaaaatccattctgttactctaaacatccaggtagctctgtgtcctgaattacagttaataaaactcgctatcaaaatacccatgccagtgagtcctgcattattggcatcatcttgaattaatgccttcctgcccaactatcagtttcagcttcaattcagctttgactagcagatgaacaagctaccattcttcccccacataattcttcttacaaaaggaccatcgctacactgtatccccttcttttggtttctttctgactggtagagtggtaggtgttgatgccaactgccaagtatagcctccttccttcaacttctccatcataaacagtagcaagaaagaagcagcacatcctttttatcagttacagtaatcaaatagtctgaacgtattcctgattttagagcctataaccaatcctctgccaccataatatattttgaattacagtaataaatcttgttagactgcatagctcaaagacataattagccgtcctggtttgtcctctgaaactaaaacagcatacctagacaaggtcagcaagttaattacctattctcacttctcagaccggctgcagttttccttttctgaaaccaacggcatgaggcctttaacaaaggaacgtcctcgcaaccgccaaatcgaaggcactccctctaaaacagaagccacatcatcagcctagaacaaaattcctgacaaagaaaagcattgctagagcgtcagccatgaatgtgatgacaacaacaacttcacacacgcctgttgcattgcatttttcagtactcagaacagcatcctcaacctgctcatgcttcacatattcttcctttccttgggcagatccttcaatatcagtaggaagtatgacatcctttttacagatgaggaagcataacatcctgataaacacaaataccaattagatcacagaattattaccgaagatcatgccattacagtttttccgcaacagtacataacactctcttccaaacactactcgaagcagcaaatctggatttatcactttgttgtacaatgcattacatattagtatacttcacatcttgcatacattaaaccaggatgtatgaactgatcgttggtgcataataacttactgttaggcatgttttcctttaactttcatcaacagtattaaaccagcgatgtacggacaaatgctttttaactgtttgcagccagtaaaactgagctaaccaactgattgactaatttggatcatgtattacaatgcaggtgttcttgatctgcctggtagcaggttgcagtatctgctggttcaacacagtatgctttgtgctctgcattcgcagtttctcctcgagcaatcgcccactggccctctccctctccataagcttcaatgggctaagtgctgcattctacaccctctttgccaatgccctctcccccttttccccatctgtctacctccttctcaatgccattgtccctctcgtcgtatctcttgttgcactgccagcaatactcctctgccacccacatgacggccacctccacgttgtgcccaagcatgacaaacgtatctttcttggtctctacctcctcgcgttcatcactggcatatatctagtgatcttcggctctttcaacacaaccaactccactgcatgggtggtccttacaggtgccatggtcctcctcgccctccctctcatcatccctgcctcctccagttgttctcatgtggacacacatgaccctgaacctactgttcaactcaaccacgaagattcaagaaaaccacttttgctcaatagtgaccacagcacagagtccaatgccatgatgcagaaaacagtggaacacccaatgcaggattgttgcttgggaacagtactggagaagggacgcatgttggttctttgtgaggagcatagtgcaaagaagcttatccagtgcgtcgacttctggctatactacatagcctacttctgtggtgccactgttgggctagtgtacagcaacaacttggggcagattgcacaatcatttcaccgggaatctcagctcaccatgcttcttgccgtctactcctcctgttccttctttggtcgccttctctctgcacttccagacttccttcgcaggtccctctgtcttgttctatatacttgaatgcatcctaattctcaccagctggcccataaactaactatatatattgaatttgcatgcaggaaggtttcgtttgctcggacagggtggcttgcagctgcgttggttcccatgccaatggcgttcttcctaatgtggaaattgcatgatgtaaacactctggtagcaggaacagcactaattggtctaagctcaggcttcatctttgctgcagcagtgtcagtgacctctgagctctttggaccaaacagcattggcatgaaccataacatcctcatcaccaacatccctcttggatcacttctctacggtcagattgctgccctagtgtatgatgcaaatggcctaaagatgtcagtaatagacaaccgcaatggcatggttgacactatggtggtttgcatggggccaaagtgctactcaaccacattctttgtgtggggttgtatcacattcctggggttggtgtcaagcataatcctattcttgagaacaagaacagcttacagtgctgctggtggtcagcaagttgtaaacaccttagcgaagtttcgacttgacagaactccttgatctgttccttactgctatgaaaccatggctactttgtacaagttttgattgagttctaggtgaactaggttagtagataacatgcatgtaaataaaatcatcagagagaatcgcagagaaagaagcagattaggatagcagttccatttacagggcattgatgttgagttgttgacatccaagatgccacggaattaattttgaacaattgtttctaacataaatagtaaaatcaagaacgtttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0107400, RefSeq:Os11g0107400